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1.
Coupling biogeochemical process rates and metagenomic blueprints of coastal bacterial assemblages in the context of environmental change.
Environ Microbiol
; 20(8): 3083-3099, 2018 08.
Article
in English
| MEDLINE | ID: mdl-30084235
2.
Binning metagenomic contigs by coverage and composition.
Nat Methods
; 11(11): 1144-6, 2014 Nov.
Article
in English
| MEDLINE | ID: mdl-25218180
3.
Active anaerobic methane oxidation and sulfur disproportionation in the deep terrestrial subsurface.
ISME J
; 16(6): 1583-1593, 2022 06.
Article
in English
| MEDLINE | ID: mdl-35173296
4.
Ecologically coherent population structure of uncultivated bacterioplankton.
ISME J
; 15(10): 3034-3049, 2021 10.
Article
in English
| MEDLINE | ID: mdl-33953362
5.
Machine Learning Predicts the Presence of 2,4,6-Trinitrotoluene in Sediments of a Baltic Sea Munitions Dumpsite Using Microbial Community Compositions.
Front Microbiol
; 12: 626048, 2021.
Article
in English
| MEDLINE | ID: mdl-34659134
6.
Active sulfur cycling in the terrestrial deep subsurface.
ISME J
; 14(5): 1260-1272, 2020 05.
Article
in English
| MEDLINE | ID: mdl-32047278
7.
Ecosystem-wide metagenomic binning enables prediction of ecological niches from genomes.
Commun Biol
; 3(1): 119, 2020 03 13.
Article
in English
| MEDLINE | ID: mdl-32170201
8.
AFISsys - An autonomous instrument for the preservation of brackish water samples for microbial metatranscriptome analysis.
Water Res
; 149: 351-361, 2019 02 01.
Article
in English
| MEDLINE | ID: mdl-30469021
9.
Effects of allochthonous dissolved organic matter input on microbial composition and nitrogen-cycling genes at two contrasting estuarine sites.
FEMS Microbiol Ecol
; 95(9)2019 09 01.
Article
in English
| MEDLINE | ID: mdl-31397876
10.
Genomes from uncultivated prokaryotes: a comparison of metagenome-assembled and single-amplified genomes.
Microbiome
; 6(1): 173, 2018 09 28.
Article
in English
| MEDLINE | ID: mdl-30266101
11.
BARM and BalticMicrobeDB, a reference metagenome and interface to meta-omic data for the Baltic Sea.
Sci Data
; 5: 180146, 2018 07 31.
Article
in English
| MEDLINE | ID: mdl-30063227
12.
Stationary and portable sequencing-based approaches for tracing wastewater contamination in urban stormwater systems.
Sci Rep
; 8(1): 11907, 2018 08 09.
Article
in English
| MEDLINE | ID: mdl-30093614
13.
Biogeochemical Cycling by a Low-Diversity Microbial Community in Deep Groundwater.
Front Microbiol
; 9: 2129, 2018.
Article
in English
| MEDLINE | ID: mdl-30245678
14.
DESMAN: a new tool for de novo extraction of strains from metagenomes.
Genome Biol
; 18(1): 181, 2017 09 21.
Article
in English
| MEDLINE | ID: mdl-28934976
15.
Ninety-nine de novo assembled genomes from the moose (Alces alces) rumen microbiome provide new insights into microbial plant biomass degradation.
ISME J
; 11(11): 2538-2551, 2017 11.
Article
in English
| MEDLINE | ID: mdl-28731473
16.
The nf-core framework for community-curated bioinformatics pipelines.
Nat Biotechnol
; 38(3): 276-278, 2020 03.
Article
in English
| MEDLINE | ID: mdl-32055031
17.
Metagenome-assembled genomes uncover a global brackish microbiome.
Genome Biol
; 16: 279, 2015 Dec 14.
Article
in English
| MEDLINE | ID: mdl-26667648
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