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1.
Atypical acute myeloid leukemia-specific transcripts generate shared and immunogenic MHC class-I-associated epitopes.
Immunity
; 54(4): 737-752.e10, 2021 04 13.
Article
in English
| MEDLINE | ID: mdl-33740418
2.
Immunopeptidomic analyses of colorectal cancers with and without microsatellite instability.
Mol Cell Proteomics
; 21(5): 100228, 2022 05.
Article
in English
| MEDLINE | ID: mdl-35367648
3.
MAPDP: A Cloud-Based Computational Platform for Immunopeptidomics Analyses.
J Proteome Res
; 19(4): 1873-1881, 2020 04 03.
Article
in English
| MEDLINE | ID: mdl-32108478
4.
Comparison of the MHC I Immunopeptidome Repertoire of B-Cell Lymphoblasts Using Two Isolation Methods.
Proteomics
; 18(12): e1700251, 2018 06.
Article
in English
| MEDLINE | ID: mdl-29508533
5.
Targeted identification of SUMOylation sites in human proteins using affinity enrichment and paralog-specific reporter ions.
Mol Cell Proteomics
; 12(9): 2536-50, 2013 Sep.
Article
in English
| MEDLINE | ID: mdl-23750026
6.
Regulation of stress-inducible phosphoprotein 1 nuclear retention by protein inhibitor of activated STAT PIAS1.
Mol Cell Proteomics
; 12(11): 3253-70, 2013 Nov.
Article
in English
| MEDLINE | ID: mdl-23938469
7.
Breast cancer immunopeptidomes contain numerous shared tumor antigens.
J Clin Invest
; 134(1)2024 Jan 02.
Article
in English
| MEDLINE | ID: mdl-37906288
8.
Transposable elements regulate thymus development and function.
Elife
; 122024 Apr 18.
Article
in English
| MEDLINE | ID: mdl-38635416
9.
Autophagy degrades immunogenic endogenous retroelements induced by 5-azacytidine in acute myeloid leukemia.
Leukemia
; 38(5): 1019-1031, 2024 May.
Article
in English
| MEDLINE | ID: mdl-38627586
10.
BamQuery: a proteogenomic tool to explore the immunopeptidome and prioritize actionable tumor antigens.
Genome Biol
; 24(1): 188, 2023 08 15.
Article
in English
| MEDLINE | ID: mdl-37582761
11.
Induced pluripotent stem cells display a distinct set of MHC I-associated peptides shared by human cancers.
Cell Rep
; 40(7): 111241, 2022 08 16.
Article
in English
| MEDLINE | ID: mdl-35977509
12.
Most non-canonical proteins uniquely populate the proteome or immunopeptidome.
Cell Rep
; 34(10): 108815, 2021 03 09.
Article
in English
| MEDLINE | ID: mdl-33691108
13.
Widespread and tissue-specific expression of endogenous retroelements in human somatic tissues.
Genome Med
; 12(1): 40, 2020 04 28.
Article
in English
| MEDLINE | ID: mdl-32345368
14.
Proteogenomics Uncovers a Vast Repertoire of Shared Tumor-Specific Antigens in Ovarian Cancer.
Cancer Immunol Res
; 8(4): 544-555, 2020 04.
Article
in English
| MEDLINE | ID: mdl-32047025
15.
Noncoding regions are the main source of targetable tumor-specific antigens.
Sci Transl Med
; 10(470)2018 12 05.
Article
in English
| MEDLINE | ID: mdl-30518613
16.
SUMO-Modification of the La Protein Facilitates Binding to mRNA In Vitro and in Cells.
PLoS One
; 11(5): e0156365, 2016.
Article
in English
| MEDLINE | ID: mdl-27224031
17.
Global proteogenomic analysis of human MHC class I-associated peptides derived from non-canonical reading frames.
Nat Commun
; 7: 10238, 2016 Jan 05.
Article
in English
| MEDLINE | ID: mdl-26728094
18.
MHC class I-associated peptides derive from selective regions of the human genome.
J Clin Invest
; 126(12): 4690-4701, 2016 12 01.
Article
in English
| MEDLINE | ID: mdl-27841757
19.
Large-scale analysis of lysine SUMOylation by SUMO remnant immunoaffinity profiling.
Nat Commun
; 5: 5409, 2014 Nov 13.
Article
in English
| MEDLINE | ID: mdl-25391492
20.
Role of SUMOylation in full antiestrogenicity.
Mol Cell Biol
; 32(19): 3823-37, 2012 Oct.
Article
in English
| MEDLINE | ID: mdl-22826433