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1.
Multiclonal human origin and global expansion of an endemic bacterial pathogen of livestock.
Proc Natl Acad Sci U S A
; 119(50): e2211217119, 2022 12 13.
Article
in English
| MEDLINE | ID: mdl-36469788
2.
Setting the basis of best practices and standards for curation and annotation of logical models in biology-highlights of the [BC]2 2019 CoLoMoTo/SysMod Workshop.
Brief Bioinform
; 22(2): 1848-1859, 2021 03 22.
Article
in English
| MEDLINE | ID: mdl-32313939
3.
Transcriptome-based network analysis reveals a spectrum model of human macrophage activation.
Immunity
; 40(2): 274-88, 2014 Feb 20.
Article
in English
| MEDLINE | ID: mdl-24530056
4.
Graphia: A platform for the graph-based visualisation and analysis of high dimensional data.
PLoS Comput Biol
; 18(7): e1010310, 2022 07.
Article
in English
| MEDLINE | ID: mdl-35877685
5.
A graph-based approach for the visualisation and analysis of bacterial pangenomes.
BMC Bioinformatics
; 23(1): 416, 2022 Oct 08.
Article
in English
| MEDLINE | ID: mdl-36209064
6.
The pinna enhances angular discrimination in the frontal hemifield.
J Acoust Soc Am
; 152(4): 2140, 2022 10.
Article
in English
| MEDLINE | ID: mdl-36319254
7.
Visualization and analysis of RNA-Seq assembly graphs.
Nucleic Acids Res
; 47(14): 7262-7275, 2019 08 22.
Article
in English
| MEDLINE | ID: mdl-31305886
8.
Can DCs be distinguished from macrophages by molecular signatures?
Nat Immunol
; 14(3): 187-9, 2013 Mar.
Article
in English
| MEDLINE | ID: mdl-23416664
9.
Pre/pro-B cells generate macrophage populations during homeostasis and inflammation.
Proc Natl Acad Sci U S A
; 114(20): E3954-E3963, 2017 05 16.
Article
in English
| MEDLINE | ID: mdl-28461481
10.
A high resolution atlas of gene expression in the domestic sheep (Ovis aries).
PLoS Genet
; 13(9): e1006997, 2017 Sep.
Article
in English
| MEDLINE | ID: mdl-28915238
11.
A core transcriptional signature of human microglia: Derivation and utility in describing region-dependent alterations associated with Alzheimer's disease.
Glia
; 67(7): 1240-1253, 2019 07.
Article
in English
| MEDLINE | ID: mdl-30758077
12.
Fibroblast polarization over the myocardial infarction time continuum shifts roles from inflammation to angiogenesis.
Basic Res Cardiol
; 114(2): 6, 2019 01 11.
Article
in English
| MEDLINE | ID: mdl-30635789
13.
Distribution of Misfolded Prion Protein Seeding Activity Alone Does Not Predict Regions of Neurodegeneration.
PLoS Biol
; 14(11): e1002579, 2016 Nov.
Article
in English
| MEDLINE | ID: mdl-27880767
14.
Modelling the Structure and Dynamics of Biological Pathways.
PLoS Biol
; 14(8): e1002530, 2016 08.
Article
in English
| MEDLINE | ID: mdl-27509052
15.
Bovine Host Genetic Variation Influences Rumen Microbial Methane Production with Best Selection Criterion for Low Methane Emitting and Efficiently Feed Converting Hosts Based on Metagenomic Gene Abundance.
PLoS Genet
; 12(2): e1005846, 2016 Feb.
Article
in English
| MEDLINE | ID: mdl-26891056
16.
Mapping macrophage polarization over the myocardial infarction time continuum.
Basic Res Cardiol
; 113(4): 26, 2018 06 04.
Article
in English
| MEDLINE | ID: mdl-29868933
17.
Derivation of marker gene signatures from human skin and their use in the interpretation of the transcriptional changes associated with dermatological disorders.
J Pathol
; 241(5): 600-613, 2017 04.
Article
in English
| MEDLINE | ID: mdl-28008606
18.
Insufficient compensation for self-motion during perception of object speed: The vestibular Aubert-Fleischl phenomenon.
J Vis
; 18(13): 9, 2018 12 03.
Article
in English
| MEDLINE | ID: mdl-30550620
19.
Transcriptomic analysis of mononuclear phagocyte differentiation and activation.
Immunol Rev
; 262(1): 74-84, 2014 Nov.
Article
in English
| MEDLINE | ID: mdl-25319328
20.
Meta-analysis reveals conserved cell cycle transcriptional network across multiple human cell types.
BMC Genomics
; 18(1): 30, 2017 01 05.
Article
in English
| MEDLINE | ID: mdl-28056781