Search details
1.
Genome3D: integrating a collaborative data pipeline to expand the depth and breadth of consensus protein structure annotation.
Nucleic Acids Res
; 48(D1): D314-D319, 2020 01 08.
Article
in English
| MEDLINE | ID: mdl-31733063
2.
ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology.
Plant Cell
; 29(8): 1806-1821, 2017 Aug.
Article
in English
| MEDLINE | ID: mdl-28808136
3.
Genome3D: exploiting structure to help users understand their sequences.
Nucleic Acids Res
; 43(Database issue): D382-6, 2015 Jan.
Article
in English
| MEDLINE | ID: mdl-25348407
4.
Three-dimensional structure of the human breast cancer resistance protein (BCRP/ABCG2) in an inward-facing conformation.
Acta Crystallogr D Biol Crystallogr
; 71(Pt 8): 1725-35, 2015 Aug.
Article
in English
| MEDLINE | ID: mdl-26249353
5.
Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains.
Nucleic Acids Res
; 41(Database issue): D499-507, 2013 Jan.
Article
in English
| MEDLINE | ID: mdl-23203986
6.
Functional significance of mutations in the Snf2 domain of ATRX.
Hum Mol Genet
; 20(13): 2603-10, 2011 Jul 01.
Article
in English
| MEDLINE | ID: mdl-21505078
7.
High-quality protein backbone reconstruction from alpha carbons using Gaussian mixture models.
J Comput Chem
; 34(22): 1881-9, 2013 Aug 15.
Article
in English
| MEDLINE | ID: mdl-23703289
8.
3DLigandSite: predicting ligand-binding sites using similar structures.
Nucleic Acids Res
; 38(Web Server issue): W469-73, 2010 Jul.
Article
in English
| MEDLINE | ID: mdl-20513649
9.
Sequencing delivers diminishing returns for homology detection: implications for mapping the protein universe.
Bioinformatics
; 26(21): 2664-71, 2010 Nov 01.
Article
in English
| MEDLINE | ID: mdl-20843957
10.
The Genome3D Consortium for Structural Annotations of Selected Model Organisms.
Methods Mol Biol
; 2165: 27-67, 2020.
Article
in English
| MEDLINE | ID: mdl-32621218
11.
PhyreRisk: A Dynamic Web Application to Bridge Genomics, Proteomics and 3D Structural Data to Guide Interpretation of Human Genetic Variants.
J Mol Biol
; 431(13): 2460-2466, 2019 06 14.
Article
in English
| MEDLINE | ID: mdl-31075275
12.
Exploring the extremes of sequence/structure space with ensemble fold recognition in the program Phyre.
Proteins
; 70(3): 611-25, 2008 Feb 15.
Article
in English
| MEDLINE | ID: mdl-17876813
13.
Identification of the Autochaperone Domain in the Type Va Secretion System (T5aSS): Prevalent Feature of Autotransporters with a ß-Helical Passenger.
Front Microbiol
; 8: 2607, 2017.
Article
in English
| MEDLINE | ID: mdl-29375499
14.
PhyreStorm: A Web Server for Fast Structural Searches Against the PDB.
J Mol Biol
; 428(4): 702-708, 2016 Feb 22.
Article
in English
| MEDLINE | ID: mdl-26517951
15.
The evolution of biology. A shift towards the engineering of prediction-generating tools and away from traditional research practice.
EMBO Rep
; 9(12): 1163-7, 2008 Dec.
Article
in English
| MEDLINE | ID: mdl-19008917
16.
Partial protein domains: evolutionary insights and bioinformatics challenges.
Genome Biol
; 16: 100, 2015 May 19.
Article
in English
| MEDLINE | ID: mdl-25986583
17.
The Phyre2 web portal for protein modeling, prediction and analysis.
Nat Protoc
; 10(6): 845-58, 2015 Jun.
Article
in English
| MEDLINE | ID: mdl-25950237
18.
SuSPect: enhanced prediction of single amino acid variant (SAV) phenotype using network features.
J Mol Biol
; 426(14): 2692-701, 2014 Jul 15.
Article
in English
| MEDLINE | ID: mdl-24810707
19.
Validating a Coarse-Grained Potential Energy Function through Protein Loop Modelling.
PLoS One
; 8(6): e65770, 2013.
Article
in English
| MEDLINE | ID: mdl-23824634
20.
Functional assignment of Mycobacterium tuberculosis proteome revealed by genome-scale fold-recognition.
Tuberculosis (Edinb)
; 93(1): 40-6, 2013 Jan.
Article
in English
| MEDLINE | ID: mdl-23287603