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1.
Intratumoral presence of the genotoxic gut bacteria pks+ E. coli, Enterotoxigenic Bacteroides fragilis, and Fusobacterium nucleatum and their association with clinicopathological and molecular features of colorectal cancer.
Br J Cancer
; 130(5): 728-740, 2024 Mar.
Article
in English
| MEDLINE | ID: mdl-38200234
2.
Comparison of contemporary invasive and non-invasive Streptococcus pneumoniae isolates reveals new insights into circulating anti-microbial resistance determinants.
Antimicrob Agents Chemother
; 67(11): e0078523, 2023 11 15.
Article
in English
| MEDLINE | ID: mdl-37823632
3.
Viral Genomics to Inform Infection-control Response in Occupational Coronavirus Disease 2019 (COVID-19) Transmission.
Clin Infect Dis
; 73(7): e1881-e1884, 2021 10 05.
Article
in English
| MEDLINE | ID: mdl-32927479
4.
Search and Contain: Impact of an Integrated Genomic and Epidemiological Surveillance and Response Program for Control of Carbapenemase-producing Enterobacterales.
Clin Infect Dis
; 73(11): e3912-e3920, 2021 12 06.
Article
in English
| MEDLINE | ID: mdl-32663248
5.
Genomic Epidemiology and Antimicrobial Resistance Mechanisms of Imported Typhoid in Australia.
Antimicrob Agents Chemother
; 65(12): e0120021, 2021 11 17.
Article
in English
| MEDLINE | ID: mdl-34543095
6.
Prolonged Outbreak of Multidrug-Resistant Shigella sonnei Harboring blaCTX-M-27 in Victoria, Australia.
Antimicrob Agents Chemother
; 64(12)2020 11 17.
Article
in English
| MEDLINE | ID: mdl-33020158
7.
Genomics for Molecular Epidemiology and Detecting Transmission of Carbapenemase-Producing Enterobacterales in Victoria, Australia, 2012 to 2016.
J Clin Microbiol
; 57(9)2019 09.
Article
in English
| MEDLINE | ID: mdl-31315956
8.
Surveillance for SARS-CoV-2 variants of concern in the Australian context.
Med J Aust
; 214(11): 500-502.e1, 2021 06.
Article
in English
| MEDLINE | ID: mdl-34060079
9.
Initial and extended use of femoral versus nonfemoral double-lumen vascular catheters and catheter-related infection during continuous renal replacement therapy.
Am J Kidney Dis
; 64(6): 909-17, 2014 Dec.
Article
in English
| MEDLINE | ID: mdl-24882583
10.
Whole genome sequencing of drug-resistant Mycobacterium tuberculosis isolates in Victoria, Australia.
Int J Infect Dis
; 138: 46-53, 2024 Jan.
Article
in English
| MEDLINE | ID: mdl-37967715
11.
Emergence and clonal expansion of a qacA-harbouring sequence type 45 lineage of methicillin-resistant Staphylococcus aureus.
Commun Biol
; 7(1): 349, 2024 Mar 21.
Article
in English
| MEDLINE | ID: mdl-38514781
12.
Outbreak investigation using high-throughput genome sequencing within a diagnostic microbiology laboratory.
J Clin Microbiol
; 51(5): 1396-401, 2013 May.
Article
in English
| MEDLINE | ID: mdl-23408689
13.
Public health implementation of pathogen genomics: the role for accreditation and application of ISO standards.
Microb Genom
; 9(8)2023 08.
Article
in English
| MEDLINE | ID: mdl-37590046
14.
Hidden Resistances: How Routine Whole-Genome Sequencing Uncovered an Otherwise Undetected blaNDM-1 Gene in Vibrio alginolyticus from Imported Seafood.
Microbiol Spectr
; 11(1): e0417622, 2023 02 14.
Article
in English
| MEDLINE | ID: mdl-36602387
15.
The importance of utilizing travel history metadata for informative phylogeographical inferences: a case study of early SARS-CoV-2 introductions into Australia.
Microb Genom
; 9(8)2023 08.
Article
in English
| MEDLINE | ID: mdl-37650865
16.
An ISO-certified genomics workflow for identification and surveillance of antimicrobial resistance.
Nat Commun
; 14(1): 60, 2023 01 04.
Article
in English
| MEDLINE | ID: mdl-36599823
17.
Population structure, serotype distribution and antibiotic resistance of Streptococcus pneumoniae causing invasive disease in Victoria, Australia.
Microb Genom
; 9(7)2023 07.
Article
in English
| MEDLINE | ID: mdl-37471116
18.
Genomic epidemiology offers high resolution estimates of serial intervals for COVID-19.
Nat Commun
; 14(1): 4830, 2023 08 10.
Article
in English
| MEDLINE | ID: mdl-37563113
19.
Optimising genomic approaches for identifying vancomycin-resistant Enterococcus faecium transmission in healthcare settings.
Nat Commun
; 13(1): 509, 2022 01 26.
Article
in English
| MEDLINE | ID: mdl-35082278
20.
Multi-site implementation of whole genome sequencing for hospital infection control: A prospective genomic epidemiological analysis.
Lancet Reg Health West Pac
; 23: 100446, 2022 Jun.
Article
in English
| MEDLINE | ID: mdl-35465046