Search details
1.
EzMechanism: an automated tool to propose catalytic mechanisms of enzyme reactions.
Nat Methods
; 20(10): 1516-1522, 2023 Oct.
Article
in English
| MEDLINE | ID: mdl-37735566
2.
The mission to ensure continued funding for excellent basic research.
EMBO Rep
; 24(7): e57498, 2023 Jul 05.
Article
in English
| MEDLINE | ID: mdl-37227159
3.
Enzyme function and evolution through the lens of bioinformatics.
Biochem J
; 480(22): 1845-1863, 2023 11 29.
Article
in English
| MEDLINE | ID: mdl-37991346
4.
GRaSP-web: a machine learning strategy to predict binding sites based on residue neighborhood graphs.
Nucleic Acids Res
; 50(W1): W392-W397, 2022 07 05.
Article
in English
| MEDLINE | ID: mdl-35524575
5.
Cell type-specific modulation of healthspan by Forkhead family transcription factors in the nervous system.
Proc Natl Acad Sci U S A
; 118(8)2021 02 23.
Article
in English
| MEDLINE | ID: mdl-33593901
6.
Fine-tuning autophagy maximises lifespan and is associated with changes in mitochondrial gene expression in Drosophila.
PLoS Genet
; 16(11): e1009083, 2020 11.
Article
in English
| MEDLINE | ID: mdl-33253201
7.
Differential Complex Formation via Paralogs in the Human Sin3 Protein Interaction Network.
Mol Cell Proteomics
; 19(9): 1468-1484, 2020 09.
Article
in English
| MEDLINE | ID: mdl-32467258
8.
Context dependency of Set1/COMPASS-mediated histone H3 Lys4 trimethylation.
Genes Dev
; 28(2): 115-20, 2014 Jan 15.
Article
in English
| MEDLINE | ID: mdl-24402317
9.
A global analysis of function and conservation of catalytic residues in enzymes.
J Biol Chem
; 295(2): 314-324, 2020 01 10.
Article
in English
| MEDLINE | ID: mdl-31796628
10.
GRaSP: a graph-based residue neighborhood strategy to predict binding sites.
Bioinformatics
; 36(Suppl_2): i726-i734, 2020 12 30.
Article
in English
| MEDLINE | ID: mdl-33381849
11.
Functional conservation in genes and pathways linking ageing and immunity.
Immun Ageing
; 18(1): 23, 2021 May 14.
Article
in English
| MEDLINE | ID: mdl-33990202
12.
CATH: expanding the horizons of structure-based functional annotations for genome sequences.
Nucleic Acids Res
; 47(D1): D280-D284, 2019 01 08.
Article
in English
| MEDLINE | ID: mdl-30398663
13.
An automated protocol for modelling peptide substrates to proteases.
BMC Bioinformatics
; 21(1): 586, 2020 Dec 29.
Article
in English
| MEDLINE | ID: mdl-33375946
14.
Influence of aminoacyl-tRNA synthetase complex-interacting multifunctional protein 1 on epithelial differentiation and organization during lung development.
Am J Physiol Lung Cell Mol Physiol
; 319(2): L369-L379, 2020 08 01.
Article
in English
| MEDLINE | ID: mdl-32579851
15.
The impact of AlphaFold2 one year on.
Nat Methods
; 19(1): 15-20, 2022 01.
Article
in English
| MEDLINE | ID: mdl-35017725
16.
Finding enzyme cofactors in Protein Data Bank.
Bioinformatics
; 35(18): 3510-3511, 2019 09 15.
Article
in English
| MEDLINE | ID: mdl-30759194
17.
VarMap: a web tool for mapping genomic coordinates to protein sequence and structure and retrieving protein structural annotations.
Bioinformatics
; 35(22): 4854-4856, 2019 11 01.
Article
in English
| MEDLINE | ID: mdl-31192369
18.
Using the drug-protein interactome to identify anti-ageing compounds for humans.
PLoS Comput Biol
; 15(1): e1006639, 2019 01.
Article
in English
| MEDLINE | ID: mdl-30625143
19.
A Structured Workflow for Mapping Human Sin3 Histone Deacetylase Complex Interactions Using Halo-MudPIT Affinity-Purification Mass Spectrometry.
Mol Cell Proteomics
; 17(7): 1432-1447, 2018 07.
Article
in English
| MEDLINE | ID: mdl-29599190
20.
Mechanism and Catalytic Site Atlas (M-CSA): a database of enzyme reaction mechanisms and active sites.
Nucleic Acids Res
; 46(D1): D618-D623, 2018 01 04.
Article
in English
| MEDLINE | ID: mdl-29106569