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1.
Chemphyschem ; 14(3): 568-78, 2013 Feb 25.
Artículo en Inglés | MEDLINE | ID: mdl-23345058

RESUMEN

The contributions of various physical factors to the energetics of complexation of aromatic drug molecules with C(60) fullerene are investigated in terms of the calculated magnitudes of equilibrium complexation constants and the components of the net Gibbs free energy. Models of complexation are developed taking into account the polydisperse nature of fullerene solutions in terms of the continuous or discrete (fractal) aggregation of C(60) molecules. Analysis of the energetics has shown that stabilization of the ligand-fullerene complexes in aqueous solution is mainly determined by intermolecular van der Waals interactions and, to lesser extent, by hydrophobic interactions. The results provide a physicochemical basis for a potentially new biotechnological application of fullerenes as modulators of biological activity of aromatic drugs.


Asunto(s)
Complejos de Coordinación/química , Fulerenos/química , Química Farmacéutica , Doxorrubicina/química , Hidrocarburos Aromáticos/química , Ligandos , Azul de Metileno/química , Modelos Moleculares , Estructura Molecular , Proflavina/química
2.
J Mol Model ; 17(5): 997-1006, 2011 May.
Artículo en Inglés | MEDLINE | ID: mdl-20640866

RESUMEN

To study M-DNA molecular structure (such DNA with transition metal ions placed between the nucleic bases is able to conduct the electric current) and its conductivity mechanisms, we carried out ab initio quantum-mechanical calculations of electronic and spatial structures, thermodynamic characteristics of adenine-thymine (АТ) and guanine-cytosine (GC) base pair complexes with Zn(2+) and Ni(2+). To take into account the influence of the alkaline environment, calculations for these complexes were also carried out with hydroxyl and two water molecules. Computations were performed at MP2 level of theory using 6-31+G* basis set. Analogous calculations were carried out for (AC)(TG) stacking dimer of nucleic acid base pairs with two Zn(2+). The calculation of the interaction energy in complexes has shown the preference of locating the metal ion (instead of the imino proton) between bases in M-DNA. The electronic transition energy calculation has revealed the reduction of the first singlet transition energy in АТ and GC complexes with Ni(2+) from 4.5 eV to 0.4 - 0.6 eV. Ni(2+) orbitals take part in the formation of HOMO and LUMO on the complexes investigated. It was shown that charges of metal ions incorporated into complexes with nucleic bases and in dimer decrease significantly.


Asunto(s)
Adenina/química , Citosina/química , Guanina/química , Níquel/química , Conformación de Ácido Nucleico , Oligonucleótidos/química , Protones , Timina/química , Zinc/química , Adenina/metabolismo , Emparejamiento Base , Citosina/metabolismo , ADN/química , ADN/metabolismo , Electrones , Guanina/metabolismo , Enlace de Hidrógeno , Modelos Moleculares , Nanotecnología , Níquel/metabolismo , Oligonucleótidos/metabolismo , Teoría Cuántica , Termodinámica , Timina/metabolismo , Zinc/metabolismo
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