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1.
J Neurosci ; 33(22): 9508-19, 2013 May 29.
Artículo en Inglés | MEDLINE | ID: mdl-23719817

RESUMEN

The encoding of auditory information with indefatigable precision requires efficient resupply of vesicles at inner hair cell (IHC) ribbon synapses. Otoferlin, a transmembrane protein responsible for deafness in DFNB9 families, has been postulated to act as a calcium sensor for exocytosis as well as to be involved in rapid vesicle replenishment of IHCs. However, the molecular basis of vesicle recycling in IHCs is largely unknown. In the present study, we used high-resolution liquid chromatography coupled with mass spectrometry to copurify otoferlin interaction partners in the mammalian cochlea. We identified multiple subunits of the adaptor protein complex AP-2 (CLAP), an essential component of clathrin-mediated endocytosis, as binding partners of otoferlin in rats and mice. The interaction between otoferlin and AP-2 was confirmed by coimmunoprecipitation. We also found that AP-2 interacts with myosin VI, another otoferlin binding partner important for clathrin-mediated endocytosis (CME). The expression of AP-2 in IHCs was verified by reverse transcription PCR. Confocal microscopy experiments revealed that the expression of AP-2 and its colocalization with otoferlin is confined to mature IHCs. When CME was inhibited by blocking dynamin action, real-time changes in membrane capacitance showed impaired synaptic vesicle replenishment in mature but not immature IHCs. We suggest that an otoferlin-AP-2 interaction drives Ca(2+)- and stimulus-dependent compensating CME in mature IHCs.


Asunto(s)
Clatrina/fisiología , Cóclea/fisiología , Endocitosis/fisiología , Células Ciliadas Auditivas Internas/fisiología , Proteínas de la Membrana/fisiología , Complejo 2 de Proteína Adaptadora/fisiología , Animales , Membrana Celular/fisiología , Cóclea/citología , Fenómenos Electrofisiológicos , Inmunohistoquímica , Inmunoprecipitación , Espectrometría de Masas , Ratones , Microscopía Confocal , Cadenas Pesadas de Miosina/fisiología , Unión Proteica , ARN Mensajero/biosíntesis , ARN Mensajero/genética , Ratas , Ratas Wistar , Reacción en Cadena en Tiempo Real de la Polimerasa , Sinapsis/fisiología
2.
Genes Chromosomes Cancer ; 52(3): 237-49, 2013 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-23124995

RESUMEN

MircoRNAs as a new class of regulatory molecules have been investigated in many specific cells and organs in healthy and diseased conditions. Although miRNA signatures can be directly assessed in patients' affected tissues such as tumor sections, recent studies revealed that miRNA profiles can also be obtained indirectly, that is, from the patients' peripheral blood. For better understanding of miRNA's contribution to gastric carcinoma (one of the leading causes of cancer-related mortality worldwide), we screened for deregulated miRNAs in blood collected from human cancer patients and compared the expression patterns with a gastric carcinoma mouse model (Tff1 knock-out). The profiles were assessed using species-specific miRNA microarrays. Among many dozens of deregulated miRNAs (219 in H. sapiens; 75 in M. musculus), a subset of eight miRNAs comparable in sequence from both species was noted. By in silico analysis, their involvement in targeting neoplastic and MAPkinase pathways was demonstrated. We found a high probability of linkage of all noted miRNAs to pathways in cancer with P-values of 0.013 and 0.018 in mice and humans, respectively. Linkage to the MAPK-signaling pathway in mice was observed with a P-value of 0.01. Moreover, when comparing the 219 deregulated miRNAs obtained from blood with deregulated miRNAs derived from gastric cancer (GC) tissues, as published previously, 24 miRNAs were identical. If confirmed in a larger patient pool, these miRNAs could constitute appropriate blood-born biomarkers for GC.


Asunto(s)
MicroARNs/genética , Neoplasias Gástricas/genética , Animales , Modelos Animales de Enfermedad , Femenino , Perfilación de la Expresión Génica , Regulación Neoplásica de la Expresión Génica , Humanos , Masculino , Ratones , Ratones Noqueados , Neoplasias Gástricas/patología
3.
Cell Physiol Biochem ; 29(5-6): 941-8, 2012.
Artículo en Inglés | MEDLINE | ID: mdl-22613993

RESUMEN

BACKGROUND: Otoferlin, a postulated calcium sensor of 230 kDa, was proposed to trigger calcium dependent fusion of vesicles with plasma membrane in the ribbon synapses of cochlear IHCs. Otoferlin's interaction with Rab8b and Myo6, proteins involved in the intracellular membrane trafficking, extended the previous hypothesis assigning Otoferlin an additional role in trans-Golgi trafficking. Here, we present another Otoferlin binding partner, Ergic2, a protein with a still unknown function but presenting sequence homology to other proteins involved in ER/Golgi vesicle trafficking. METHODS: Novel binding partners of Otoferlin were searched by yeast two-hybrid screening in a rodent cochlear cDNA library (P3-P15). RT-PCR, western blot, immunohistochemistry staining and co-immunoprecipitation were applied to analyze and confirm an interaction between Ergic2 and Otoferlin. RESULTS: The Y-2-H screening, using baits covering parts of Otoferlin's C2D domain, identified Ergic2 as an interacting protein for Otoferlin. Both are co-expressed (mRNA and protein level) in rodent cochlea and brain before- and after-onset of hearing. By RT-PCR Ergic2 was detected in cochlear IHCs and OHCs and in brain regions where Otoferlin is known to be present. Co-localization studies revealed an overlap of Ergic2 and Otoferlin signals in IHCs and neurons of cerebral cortical layer I making Ergic2 the promising binding candidate. However, while Ergic2 was co-precipitated by an anti-Otoferlin antibody in protein lysates from murine brain, this specific protein interaction was not detected in cochlea. CONCLUSION: Our new data on Otoferlin's interactome suggest that Otoferlin can form different, tissue-specific protein complexes.


Asunto(s)
Encéfalo/metabolismo , Proteínas Portadoras/metabolismo , Proteínas de la Membrana/metabolismo , Animales , Secuencia de Bases , Cóclea/metabolismo , Cartilla de ADN , Retículo Endoplásmico/metabolismo , Aparato de Golgi/metabolismo , Inmunohistoquímica , Inmunoprecipitación , Ratones , Ratones Mutantes , Unión Proteica , Transporte de Proteínas , Reacción en Cadena en Tiempo Real de la Polimerasa , Técnicas del Sistema de Dos Híbridos , Proteínas de Transporte Vesicular
4.
Cell Physiol Biochem ; 30(4): 853-62, 2012.
Artículo en Inglés | MEDLINE | ID: mdl-22907484

RESUMEN

TFF2 is one of the members of the trefoil factor family, known for its role in protection of gastrointestinal epithelia upon injury; however, recent studies suggest that TFF2 could also play an important role in the immune system. In the present study Tff2 deficient and wild type mice were infected by Y. enterocolitica which resulted in a lethal outcome in all Tff2 deficient mice, but not in WT animals. Yersinia invaded Peyer's patches more efficiently as shown by high bacterial titers in the KO mice while wild type mice displayed lower titers and a visible bacterial accumulation in the intestine. Bacterial accumulation in Peyer's patches of Tff2 deficient mice was accompanied by increased recruitment of macrophages. While an increased level of MAC-1 positive cells was observed in the spleens of both Tff2 deficient and WT mice at third day post infection, bacterial dissemination to liver, lung and kidneys was observed only in Tff2 knock-out mice. Analysis of the cellular composition of spleen did not reveal any substantial alteration to WT animals, suggesting possible disregulation of hemopoietic cells involved in immune response to Y. enterocolitica. These new data indicate that Tff2 plays an important role in immune response by protecting the organism from consequences of infection and that Tff2 knock-out mice react adversely to bacterial infections, in this case specifically to Y. enterocolitica.


Asunto(s)
Técnicas de Inactivación de Genes , Intestinos/microbiología , Mucinas/genética , Proteínas Musculares/genética , Péptidos/genética , Ganglios Linfáticos Agregados/microbiología , Yersiniosis/genética , Yersiniosis/transmisión , Yersinia enterocolitica/patogenicidad , Animales , Femenino , Inmunidad Innata , Mucosa Intestinal/metabolismo , Intestinos/inmunología , Intestinos/patología , Antígeno de Macrófago-1/análisis , Antígeno de Macrófago-1/inmunología , Ratones , Ratones Noqueados , Mucinas/inmunología , Proteínas Musculares/inmunología , Péptidos/inmunología , Ganglios Linfáticos Agregados/inmunología , Ganglios Linfáticos Agregados/metabolismo , Ganglios Linfáticos Agregados/patología , Bazo/inmunología , Bazo/metabolismo , Bazo/microbiología , Bazo/patología , Factor Trefoil-2 , Yersiniosis/inmunología , Yersiniosis/patología , Yersinia enterocolitica/inmunología
5.
Hum Mol Genet ; 18(15): 2779-90, 2009 Aug 01.
Artículo en Inglés | MEDLINE | ID: mdl-19417007

RESUMEN

Otoferlin has been proposed to be the Ca(2+) sensor in hair cell exocytosis, compensating for the classical synaptic fusion proteins synaptotagmin-1 and synaptotagmin-2. In the present study, yeast two-hybrid assays reveal myosin VI as a novel otoferlin binding partner. Co-immunoprecipitation assay and co-expression suggest an interaction of both proteins within the basolateral part of inner hair cells (IHCs). Comparison of otoferlin mutants and myosin VI mutant mice indicates non-complementary and complementary roles of myosin VI and otoferlin for synaptic maturation: (i) IHCs from otoferlin mutant mice exhibited a decoupling of CtBP2/RIBEYE and Ca(V)1.3 and severe reduction of exocytosis. (ii) Myosin VI mutant IHCs failed to transport BK channels to the membrane of the apical cell regions, and the exocytotic Ca(2+) efficiency did not mature. (iii) Otoferlin and myosin VI mutant IHCs showed a reduced basolateral synaptic surface area and altered active zone topography. Membrane infoldings in otoferlin mutant IHCs indicated disturbed transport of endocytotic membranes and link the above morphological changes to a complementary role of otoferlin and myosin VI in transport of intracellular compartments to the basolateral IHC membrane.


Asunto(s)
Sordera/metabolismo , Células Ciliadas Auditivas Internas/química , Proteínas de la Membrana/metabolismo , Cadenas Pesadas de Miosina/metabolismo , Sinapsis/química , Secuencia de Aminoácidos , Animales , Calcio/metabolismo , Sordera/genética , Modelos Animales de Enfermedad , Exocitosis , Células Ciliadas Auditivas Internas/metabolismo , Humanos , Proteínas de la Membrana/química , Proteínas de la Membrana/genética , Ratones , Ratones Transgénicos , Datos de Secuencia Molecular , Cadenas Pesadas de Miosina/química , Cadenas Pesadas de Miosina/genética , Unión Proteica , Transporte de Proteínas , Sinapsis/metabolismo , Técnicas del Sistema de Dos Híbridos
6.
Cell Physiol Biochem ; 28(5): 1023-30, 2011.
Artículo en Inglés | MEDLINE | ID: mdl-22178952

RESUMEN

BACKGROUND: FKBP8 is a multifunctional protein involved in many distinct processes like formation of central nervous system, viral RNA replication and inhibition of apoptosis. Fkbp8 expression was reported in different tissues, various cell lines and malignancies, in the latter displaying changes during carcinogenesis. Loss of Fkbp8 leads to substantial neurodegenerations during regular mouse development, thus hearing onset in mice could also potentially depend on Fkbp8 expression. Since Fkbp8 is crucial for patterning of neuronal function, we studied its expression during maturation of the rodent auditory function. METHODS: Fkbp8 gene expression in rodent cochlear samples was studied by RT-PCR, qPCR, and western blot. Localization of Fkbp8 transcripts and protein was analyzed by in-situ hybridization and immunohistochemistry. RESULTS: Studies of auditory organ demonstrate that Fkbp8 gene activity is increasing just before hearing onset and gradually decreasing after onset of hearing. Western blot analysis suggests substantial levels of Fkbp8 protein before hearing onset, and slow degradation after onset of hearing. The Fkbp8 mRNA is localized in spiral ganglion of cochlea but its distribution changes over time to the stria vascularis, a finding supported by immunohistochemistry staining. Additionally, in pre-hearing time Fkbp8-specific signal was also observed in the tectorial membrane, whose α- and ß-Tectorin components show similar time-dependent expression of mRNA as Fkbp8. CONCLUSION: These results indicate a temporal shift in expression of Fkbp8 which correlates with cochlear maturation, strongly suggesting a contribution of Fkbp8 to the onset of the rodent hearing processes.


Asunto(s)
Cóclea/metabolismo , Regulación del Desarrollo de la Expresión Génica , Proteínas de Unión a Tacrolimus/metabolismo , Animales , Cóclea/patología , Proteínas de la Matriz Extracelular/genética , Proteínas de la Matriz Extracelular/metabolismo , Femenino , Proteínas Ligadas a GPI/genética , Proteínas Ligadas a GPI/metabolismo , Perfilación de la Expresión Génica , Audición/fisiología , Inmunohistoquímica , Hibridación Fluorescente in Situ , Masculino , Proteínas de la Membrana/genética , Proteínas de la Membrana/metabolismo , Ratones , Órgano Espiral/metabolismo , Órgano Espiral/patología , ARN Mensajero/metabolismo , Ratas , Ganglio Espiral de la Cóclea/metabolismo , Ganglio Espiral de la Cóclea/patología , Estría Vascular/metabolismo , Estría Vascular/patología , Proteínas de Unión a Tacrolimus/análisis , Proteínas de Unión a Tacrolimus/genética , Factores de Tiempo
7.
RNA Biol ; 8(1): 77-81, 2011.
Artículo en Inglés | MEDLINE | ID: mdl-21289491

RESUMEN

Genetic impairment of the genes coding for three mammalian trefoil peptides resulted in severe gastrointestinal malfunctions. The trefoil peptides also appear involved in caloric metabolism. Monitoring global miRNA expression of Tff3 deficient mice points to an interplay of Tff3 with a miRNA regulatory network. We identified 21 miRNAs that were deregulated when compared to the wild type strain. In silico evaluation indicated that the majority of the 21 miRNA were connected with the metabolic pathway "glycolysis/gluconeogenesis'' (p=0.032), a signaling pathway including nine target genes Aldh9a1, Aldh2, Pck1, Aldoc, Pgam2, Pck2, Adh4, Adh5, and Fbp1. Association of Tff3 with this metabolic pathway is further supported by the observation that the body mass of adult Tff3 KO mice (five months) showed a clearly reduced weight. Furthermore, the majority of the identified 21 miRNA genes are localized on murine chromosomes 2 and 5 in three clusters (2A1, 2B, 5B3) suggesting a coordinated expression control and function.


Asunto(s)
Enfermedades Gastrointestinales/genética , MicroARNs/metabolismo , Mucinas/metabolismo , Transducción de Señal , Animales , Peso Corporal , Cromosomas de los Mamíferos/genética , Modelos Animales de Enfermedad , Ingestión de Energía , Enfermedades Gastrointestinales/metabolismo , Enfermedades Gastrointestinales/fisiopatología , Perfilación de la Expresión Génica , Regulación de la Expresión Génica , Gluconeogénesis , Glucólisis , Ratones , Ratones Endogámicos C57BL , Ratones Noqueados , MicroARNs/sangre , MicroARNs/genética , Factor Trefoil-3
8.
Hum Mol Genet ; 17(23): 3814-21, 2008 Dec 01.
Artículo en Inglés | MEDLINE | ID: mdl-18772196

RESUMEN

Mutations within OTOF encoding otoferlin lead to a recessive disorder called DFNB9. Several studies have indicated otoferlin's association with ribbon synapses of cochlear sensory hair cells, as well as data showing the protein's presence in neurons, nerve fibers and hair cells, suggesting a more ubiquitous function. Otoferlin's co-localization not only with ribbon synaptic proteins, but also with additional endosomal (EEA1) or Golgi proteins (GM130) were motivation for a search for further binding partners of otoferlin by a yeast two-hybrid screen in a rodent cochlear cDNA library (P3-P15). This screen identified Rab8b GTPase as a novel interacting partner, substantiated by transient co-expression and co-localization in HEK 293 cells and co-immunoprecipitation of the complex using tagged proteins in vitro and native proteins from cochlea. This finding implies that otoferlin could be a part of components contributing to trans-Golgi trafficking.


Asunto(s)
Sordera/metabolismo , Genes Recesivos , Proteínas de la Membrana/metabolismo , Proteínas de Unión al GTP rab/metabolismo , Animales , Línea Celular , Sordera/genética , Células Ciliadas Auditivas/metabolismo , Humanos , Proteínas de la Membrana/genética , Unión Proteica , Transporte de Proteínas , Ratas , Ratas Wistar , Técnicas del Sistema de Dos Híbridos , Proteínas de Unión al GTP rab/genética
9.
Cell Physiol Biochem ; 26(6): 959-66, 2010.
Artículo en Inglés | MEDLINE | ID: mdl-21220926

RESUMEN

Mutations in GJB2, a gene encoding the gap junction protein connexin 26 (Cx26), are a major cause for inherited and sporadic non-syndromic hearing loss, albeit with highly variable clinical effects. To determine new mutations and their frequencies in a Southern Egyptian population restriction fragment length polymorphism, gene sequencing, and single strand conformational polymorphism revealed only 2 mutations for GJB2: c.35delG and p.I71N. The allelic frequency of the c.35delG mutation was 8.7% (found in 27 out of 310 investigated alleles) resulting in a relatively low carrier frequency (1.6%) in Upper Egypt. The new mutation, a substitution of isoleucin (I) (a non-polar amino acid) by the polar amino acid asparagin (N), was localized within the conserved Cx26 structure. The functional significance of p.I71N was tested by injection of cRNA into Xenopus laevis oocytes. Cx26 hemi-channel activity was measured by depolarization activated conductance in non-coupled oocytes. As a result, the p.I71N mutated channel was non-functional. The study discloses a novel, functionally relevant GJB2 mutation and defines the contribution of Cx26 alterations to the hearing loss in the Southern Egyptian population.


Asunto(s)
Conexinas/genética , Pérdida Auditiva/genética , Mutación , Alelos , Sustitución de Aminoácidos , Animales , Conexina 26 , Conexinas/metabolismo , Egipto/epidemiología , Frecuencia de los Genes , Pérdida Auditiva/epidemiología , Humanos , Oocitos/metabolismo , Polimorfismo Conformacional Retorcido-Simple , Xenopus laevis/embriología
10.
Mol Cancer Res ; 6(4): 585-91, 2008 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-18403637

RESUMEN

The CpG island methylator phenotype (CIMP), characterized by an exceptionally high frequency of methylation of discrete CpG islands, is observed in 18% to 25% of sporadic colorectal cancers. Another hypermethylation pattern found in colorectal cancers, termed long-range epigenetic silencing, is associated with DNA/histone methylation in three distinct gene clusters at chromosome 2q14.2, showing that DNA hypermethylation can span larger chromosomal domains and lead to the silencing of flanking, unmethylated genes. We investigated whether these two phenotypes are interrelated in colorectal cancers. The CIMP status of 148 sporadic colorectal cancers was determined by methylation-specific PCR. We determined the BRAF V600E mutation by mutant allele-specific PCR amplification. The methylation status of the MLH1 gene and of three CpG islands (EN1, SCTR, and INHBB), corresponding to three distinct clusters along 2q14.2, was determined by methylation-specific PCR. The average number of sites showing methylation in CIMP+ tumors was 2.21, compared with 1.22 for CIMP- individuals, and this difference was highly significant (P = 3.6 x 10(-8), Mann-Whitney test). Moreover, all CIMP+ tumors showed hypermethylation of at least one of these loci, in contrast to CIMP- tumors, where 18 (16%) samples remained unmethylated. The mean number of simultaneously hypermethylated CpG islands at 2q14.2 differs significantly between CIMP- and CIMP+ tumors, suggesting varying effects of domain silencing in this region. Given that the number of hypermethylated loci at 2q14.2 likely affects the range of silenced flanking genes, high frequency of simultaneous hypermethylation of three CpG islands (EN1, SCTR, and INHBB) may have potential influence on specific characteristics of CIMP+ colorectal cancers.


Asunto(s)
Neoplasias Colorrectales/genética , Islas de CpG/genética , Metilación de ADN , Silenciador del Gen , Anciano , Biomarcadores de Tumor/genética , Cromosomas Humanos Par 2/genética , Femenino , Genes Relacionados con las Neoplasias , Humanos , Masculino , Persona de Mediana Edad , Mutación/genética , Fenotipo , Reacción en Cadena de la Polimerasa , Proteínas Proto-Oncogénicas B-raf/genética
11.
Cell Physiol Biochem ; 23(1-3): 143-56, 2009.
Artículo en Inglés | MEDLINE | ID: mdl-19255509

RESUMEN

Trefoil factor family (TFF) peptides provide protective and reparative effects by enhancing epithelial integrity and promoting mucosal restitution. TFF peptide expression is induced after mucosal damage. These processes are of central physiological relevance during the postnatal intestinal development and are strongly influenced during the weaning period. In piglets, weaning at early maturation stages frequently causes mucosal inflammation. The aim of this study was to evaluate postnatal intestinal TFF expression in a piglet probiotic trial. Low intestinal TFF2 expression was measured at early maturation stages. Weaning, however, was associated with a distinct response of increased TFF2 expression, indicating an important role in enhancing mucosal integrity. In the distal jejunum and ileum weaning could as well be associated with increased TFF3 mRNA levels. Differential TFF1 expression was not detected. Furthermore, TFF2 localization studies in different intestinal loci were performed by means of immunohistochemistry. Expression of selected genes (TGFA, EGFR, Cox-2) known to promote TFF signaling showed differential expression pattern as well, thereby providing further functional background. Furthermore, the expression patterns of EGFR observed in this study contribute to an advanced view of previous findings of EGFR regulation mainly obtained in rodents. An upregulated EGFR expression during early postnatal development suggests a local relevance to porcine intestinal maturation. However, a feed supplementation with the probiotic strain Enterococcus faecium did not influence TFF expression.


Asunto(s)
Regulación del Desarrollo de la Expresión Génica , Mucosa Intestinal/metabolismo , Intestinos/microbiología , Péptidos/genética , Péptidos/metabolismo , Animales , Western Blotting , Ciclooxigenasa 2/genética , Enterococcus faecium/fisiología , Receptores ErbB/genética , Humanos , Inmunohistoquímica , Ratones , Conejos , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Porcinos , Factor de Crecimiento Transformador alfa/genética , Factor Trefoil-2 , Factor de Necrosis Tumoral alfa/genética
12.
J Neurosci ; 27(12): 3174-86, 2007 Mar 21.
Artículo en Inglés | MEDLINE | ID: mdl-17376979

RESUMEN

Thyroid hormone (TH) is essential for the development of hearing. Lack of TH in a critical developmental period from embryonic day 17 to postnatal day 12 (P12) in rats and mice leads to morphological and functional deficits in the organ of Corti and the auditory pathway. We investigated the effects of TH on inner hair cells (IHCs) using patch-clamp recordings, capacitance measurements, and immunocytochemistry in hypothyroid rats and athyroid Pax8-/- mice. Spontaneous and evoked Ca2+ action potentials (APs) were present in control IHCs from P3-P11 rats and vanished in parallel with the expression of a rapidly activating Ca2+- and voltage-activated K+ (BK) conductance. IHCs of hypothyroid rats and athyroid Pax8-/- mice displayed APs until the end of the third postnatal week because of threefold elevated Ca2+ currents and missing expression of BK currents. After the fourth postnatal week, some IHCs showed BK currents whereas adjacent IHCs did not, demonstrated by electrophysiology and immunocytochemistry. To test whether the prolonged spiking activity during TH deficiency may be transmitted at IHC synapses, capacitance measurements were performed in parallel to analysis of otoferlin expression, a protein thought to play an essential role in exocytosis of IHCs. Strikingly, otoferlin was absent from IHCs of hypothyroid rats but not of Pax8-/- mice, although both cell types showed exocytosis with an efficiency typical for immature IHCs. These results demonstrate for the first time a TH-dependent control of IHC spiking activity before the onset of hearing attributable to effects of TH on Ca2+ and BK channels. Moreover, they question an indispensable role of otoferlin for exocytosis in IHCs.


Asunto(s)
Potenciales de Acción/fisiología , Canales de Calcio/biosíntesis , Células Ciliadas Auditivas Internas/metabolismo , Hipotiroidismo/metabolismo , Canales de Potasio/biosíntesis , Animales , Animales Recién Nacidos , Canales de Calcio/genética , Femenino , Regulación de la Expresión Génica/fisiología , Células Ciliadas Auditivas Internas/crecimiento & desarrollo , Hipotiroidismo/genética , Ratones , Ratones Transgénicos , Canales de Potasio/genética , Embarazo , Ratas , Ratas Wistar
13.
Cell Physiol Biochem ; 21(5-6): 437-44, 2008.
Artículo en Inglés | MEDLINE | ID: mdl-18453751

RESUMEN

Tff peptides are secreted mainly by the gastrointestinal epithelial cells and their primary role is maintaining normal structure and function of mucous epithelia. Ongoing studies on their expression pattern have disclosed other sites of their synthesis thus revealing additional physiological functions in the organism. Here we present new data about Tff3 expression in the cochlea of the rodent inner ear. On the basis of RT-PCR we describe the presence of Tff3 transcripts in both, a mouse cDNA library isolated from whole cochleae from postnatal days 3-15 (P3-P15), and also in cochlear tissue. By using a riboprobe for the fragment containing exon 1, 2 and 3 of Tff3, in situ hybridization, localized Tff3 signals in neurons of spiral ganglion and vestibular organ. We did not observe any abnormalities in the middle ear of Tff3 knock-out mice, neither did histological examination of the inner ear indicate any gross morphological changes in the cochlea. However, ABR (auditory evoked brain stem responses) audiograms revealed that the Tff3 knock-out animals show an accelerated presbyacusis and a hearing loss of about 15 dB at low frequencies increasing to 25 dB loss at higher frequencies. These findings suggest that Tff3 could play a role in neurosensory signaling. Further studies are needed to clarify this new function in the auditory system.


Asunto(s)
Pérdida Auditiva/metabolismo , Pérdida Auditiva/fisiopatología , Mucinas/deficiencia , Mucinas/metabolismo , Presbiacusia/metabolismo , Presbiacusia/fisiopatología , Animales , Progresión de la Enfermedad , Oído Interno/citología , Oído Interno/metabolismo , Oído Medio/citología , Oído Medio/metabolismo , Regulación de la Expresión Génica , Pérdida Auditiva/genética , Pérdida Auditiva/patología , Ratones , Ratones Noqueados , Mucinas/genética , Presbiacusia/genética , Presbiacusia/patología , ARN Mensajero/genética , Factor Trefoil-3
14.
Int J Mol Med ; 21(4): 429-38, 2008 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-18360688

RESUMEN

Myopia, or short-sightedness, is the most common form of vision disorder worldwide. Higher levels of myopia, usually defined as an axial eye length of >26 mm or a refractive error of < -5.00 diopters are often designated as 'pathologic' myopia, because of the predisposition to develop further eye disorders such as retinal detachment, macular degeneration, cataract, or glaucoma. Many distinct forms of autosomal dominant non-syndromic high-grade myopia are described in humans. While the underlying chromosomal locations and critical disease intervals have been identified and located to physical map positions, the gene defects and causative mutations responsible for autosomal dominant myopia remain elusive to date. Examination of a German six-generation kindred by 10K whole genome chips led to the identification of a 19-cM map segment as being the most likely familial myopia candidate region spanning from chromosomal band 12q14.3 to 12q21.31 (MYP3). In our family, a maximum multi-point LOD score of 3.9 was obtained between rs1373877 and rs717996. The recombination breakpoints in this family and the interval of the originally reported German/Italian family defining the MYP3 locus on chromosome 12 (OMIM 603221, two-point LOD score 3.85 for markers D12S1706 and D12S327 at 12q21-23) allowed us to significantly refine a minimum consensus region. This new composite region is located between microsatellite marker D12S1684 at 75.8 K and SNP_A-1509586 (alias rs717996) at position 82,636,288 bp, and narrows the original 30.1 cM of the MYP3 interval to 6.8 cM. The refined MYP3 interval allowed us to restrict the list of database-indexed genes to 25, several of which are promising MYP3 candidates based on similarities with genes and proteins involved in vision physiology and eye disease. While autosomal dominant high-grade myopia is recognized to be genetically heterogeneous, our results suggest genetic homogeneity of the MYP3-based condition in families that share the same ethnic and geographical background. The future identification of this MYP3 gene may provide insights into the pathophysiology of myopia and eye development.


Asunto(s)
Cromosomas Humanos Par 12/genética , Miopía Degenerativa/genética , Adolescente , Adulto , Anciano , Mapeo Cromosómico , Femenino , Genes Dominantes , Alemania , Haplotipos , Humanos , Escala de Lod , Masculino , Persona de Mediana Edad , Análisis de Secuencia por Matrices de Oligonucleótidos , Linaje , Polimorfismo de Nucleótido Simple
15.
J Appl Genet ; 49(1): 1-10, 2008.
Artículo en Inglés | MEDLINE | ID: mdl-18263964

RESUMEN

A body of evidence accumulated over the past decade suggests that epigenetic mechanisms play an essential role in maintaining important cellular functions. Changes in epigenetic patterns (mainly DNA hyper- and hypomethylation and, more recently, histone modifications) may contribute to the development of cancer. Aberrant epigenetic events expand thorough tumor progression from the earliest to latest stages, therefore they can serve as convenient markers for detection and prognosis of cancer. The potential reversibility of epigenetic states in the tumor cell is an attractive target for cancer therapy. Much of our current knowledge on epigenetic alternations in cancer comes from studies on gastrointestinal malignancies, mainly on colorectal cancer, which currently serves as a model for epigenetic tumorigenesis. This review summarizes the current knowledge of epigenetic changes in gastrointestinal cancers and how this relates directly to disease progression and prognosis.


Asunto(s)
Epigénesis Genética/genética , Neoplasias Gastrointestinales/etiología , Neoplasias Gastrointestinales/genética , Animales , Biomarcadores de Tumor/genética , Biomarcadores de Tumor/metabolismo , Metilación de ADN , Progresión de la Enfermedad , Neoplasias Gastrointestinales/metabolismo , Humanos , Pronóstico
16.
Immunol Lett ; 204: 23-28, 2018 12.
Artículo en Inglés | MEDLINE | ID: mdl-30312636

RESUMEN

Background Insect venom immunotherapy (VIT) is used to protect patients against Hymenoptera insects' venom allergy (HVA), which can result in severe systemic or even life-threatening conditions. Molecular mechanisms triggered by VIT remain largely unknown. Objective To compare genome-wide gene expression of patients with severe HVA prior to VIT and 12 months after. Methods Whole blood RNA samples were analyzed on an expression array. Results from differential expression obtained on a microarray platform were confirmed by quantitative real -time PCR (qRT-PCR). Subsequently we applied unsupervised clustering. Relative blood cell proportions and gene expression profiles were used as an input to csSAM to compute cell specific differential gene expression. Finally, transcription factor enrichment analysis was performed in MotifLab. Results & conclusions Comparison of genome-wide expression patterns for whole blood and qRT-PCR experiments revealed no significantly up and/or down regulated genes. This has been corroborated by unsupervised clustering. We found a significant upregulation of 26 genes in macrophages, of 15 genes in monocytes and 2 genes in T regulatory cells (Tregs). Analysis of the promoter sequences of these upregulated genes revealed a significant over-representation of binding motifs specific for kruppel-like factor 4, retinoic acid receptor gamma, and vitamin D receptor. Our results indicate that changes of gene expression invoked by VIT in peripheral blood may have a too small effect to be detected by conventional biostatistical approaches. When blood cell composition was taken into account we uncovered numerous changes of cell-specific gene expression. Given the regulatory implications we hypothesize that above-mentioned alterations may contribute to activation of anti-inflammatory signals in the innate branch of the immune system.


Asunto(s)
Alérgenos/inmunología , Desensibilización Inmunológica , Expresión Génica , Estudio de Asociación del Genoma Completo , Hipersensibilidad/genética , Hipersensibilidad/inmunología , Ponzoñas/inmunología , Adulto , Anciano , Biología Computacional/métodos , Desensibilización Inmunológica/métodos , Femenino , Perfilación de la Expresión Génica , Estudio de Asociación del Genoma Completo/métodos , Humanos , Hipersensibilidad/diagnóstico , Hipersensibilidad/terapia , Inmunoglobulina E/inmunología , Factor 4 Similar a Kruppel , Masculino , Persona de Mediana Edad
17.
Environ Mol Mutagen ; 48(8): 666-71, 2007 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-17685459

RESUMEN

Chromosomal aberrations (CAs) are important genetic alterations in the development and progression of the majority of human cancers. The frequency with which such alterations occur depends to a large extent on polymorphisms of DNA-repair genes and in genes coding for xenobiotic metabolizing enzymes, which are involved in the processes of activation and inactivation of xenobiotics. The frequency of bleomycin (BLM)-induced CAs is an indirect measure of the effectiveness of DNA repair mechanisms, and a predictor of environment-related risk of cancer. Our study was conducted on the human peripheral blood lymphocytes of 82 healthy volunteers. The aim of the study was to elucidate whether the frequency of BLM-induced CAs is correlated with polymorphisms of selected genes involved in different mechanisms of DNA repair such as: XRCC1 [base excision repair]; XPA, XPC, XPG, XPD, XPF, ERCC1 [nucleotide excision repair], NBS1, RAD51, XRCC2, XRCC3, RAD51, and BRCA1 [homologous recombination], as well as in genes encoding xenobiotic metabolizing enzymes, such as CYP1A, CYP2E1, NAT2, GSTT1, and EPHX (mEH). Our study indicated that, of the polymorphisms studied, only XPC (exon 15 and intron 11) is associated with BLM-induced CAs, suggesting a role of the NER pathway in the repair of BLM-induced chromosomal aberrations.


Asunto(s)
Bleomicina/toxicidad , Aberraciones Cromosómicas , Reparación del ADN/genética , Polimorfismo Genético , Femenino , Humanos , Desequilibrio de Ligamiento , Masculino
18.
Int J Mol Med ; 20(1): 85-9, 2007 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-17549393

RESUMEN

Van der Woude syndrome (VWS) is the most common type of syndromic orofacial cleft, which accounts for approximately 2% of all cleft lip and palate cases. It is characterised by variable association of lower lip pits, cleft lip and cleft palate, and hypodontia. VWS arises as the result of mutations in the gene encoding interferon regulatory factor 6 (IRF6). The disorder is transmitted in an autosomal dominant manner, with high penetrance and variable expressivity. Very recently, mutations of the IRF6 gene in exons 2-9 have been found in VWS patients, suggesting that this gene plays an important role in orofacial development. We report a novel mutation of the IRF6 gene in a German family. Five out of the 12 persons affected were able to be investigated. The mutation produced a stop codon within exon 4 of the IRF6 gene. All 5 patients were heterozygous for a base substitution c.201C>A changing the tyrosine codon at amino acid position 67 into a stop codon (p.Y67X) in exon 4. The premature stop codon was responsible for a truncated protein lacking parts of the DNA- binding domain and the complete Smad-interferon regulatory factor-binding domain probably essential for interactions with the Smad transcription factors.


Asunto(s)
Labio Leporino/genética , Fisura del Paladar/genética , Codón sin Sentido , Familia , Factores Reguladores del Interferón/genética , Labio Leporino/patología , Fisura del Paladar/patología , Codón de Terminación , Exones , Femenino , Genes Dominantes , Alemania , Heterocigoto , Humanos , Masculino , Linaje , Análisis de Secuencia de ADN , Síndrome
19.
Int J Mol Med ; 20(3): 315-21, 2007 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-17671735

RESUMEN

Mutations in the GJB2 gene are the most common cause of hereditary prelingual sensorineural hearing impairment in Europe. Several studies indicate that different members of the connexin protein family interact to form gap junctions in the inner ear. Mutations in different connexin genes may accumulate and, consequently lead to hearing impairment. Therefore, we screened 47 Hungarian GJB2- heterozygous (one mutation in coding exon of the GJB2 gene) patients with hearing impairment for DNA changes in two further connexin genes (GJB6 and GJB3) and in the 5' non-coding region of GJB2 including the splice sites. Eleven out of 47 GJB2-heterozygous patients analyzed carried the splice site mutation -3170G>A in the 5'UTR region of GJB2. One out of these 11 patients showed homozygous -3170G>A genotype in combination with p.R127H. Next to the GJB2 mutations we noted 2 cases of deletion in GJB6 [Delta(GJB6-D13S1830)] and 3 (2 new and 1 described) base substitutions in GJB3 [c.357C>T, c.798C>T and c.94C>T (p.R32W)] which are unlikely disease-causing. Our results suggest the importance of routine screening for the rather frequent -3170G>A mutation (in addition to c.35delG) in patients with hearing impairment.


Asunto(s)
Conexinas/genética , Pérdida Auditiva Sensorineural/genética , Mutación , Regiones no Traducidas 5' , Estudios de Casos y Controles , Conexina 26 , Conexina 30 , Análisis Mutacional de ADN , Exones , Pruebas Genéticas , Heterocigoto , Humanos , Hungría , Mutación Puntual , Regiones Promotoras Genéticas , Sitios de Empalme de ARN/genética , Eliminación de Secuencia
20.
Int J Oncol ; 29(3): 649-54, 2006 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-16865281

RESUMEN

Since pancreatic cancer is an aggressive and often incurable malignancy, we investigated if the carboxyl ester lipase gene (CEL) is specifically expressed in pancreatic tissues and its promoter can be used for a specific suicide gene approach. Twenty-five tumor samples, 24 samples of normal pancreatic tissue and control tissues from other organs were examined by radioactive in situ hybridization (ISH) to localize CEL mRNA. Two carcinoma samples and 6 permanent cell lines were examined by reverse transcriptase-polymerase chain reaction (RT-PCR). By ISH, we verified a strong CEL gene expression in acinar cells of the normal pancreas. A minor expression was noted in a single sample of acinar cell carcinoma and adenocarcinomas did not show any expression. By RT-PCR, no specific expression in both tested adenocarcinomas was observed. In summary, these results show that, contrary to notable expression of carboxyl ester lipase in acinar cells of normal pancreatic tissue, this lipase is not significantly active in pancreatic adenocarcinomas and thus not an apt genetic marker for diagnostic or therapeutic approaches.


Asunto(s)
Biomarcadores de Tumor/genética , Regulación Enzimológica de la Expresión Génica/fisiología , Lipasa/genética , Páncreas/enzimología , Neoplasias Pancreáticas/enzimología , Adenocarcinoma/enzimología , Adenocarcinoma/genética , Adenocarcinoma Mucinoso/enzimología , Adenocarcinoma Mucinoso/genética , Biomarcadores de Tumor/metabolismo , Carcinoma de Células Acinares/enzimología , Carcinoma de Células Acinares/genética , Carcinoma Ductal Pancreático/enzimología , Carcinoma Ductal Pancreático/genética , Humanos , Hibridación in Situ , Lipasa/metabolismo , Neoplasias Hepáticas/enzimología , Neoplasias Hepáticas/genética , Neoplasias Hepáticas/secundario , Neoplasias Pancreáticas/genética , Pancreatitis/enzimología , Pancreatitis/genética , Sondas ARN , ARN Mensajero/genética , ARN Mensajero/metabolismo , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa
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