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1.
J Phys Chem A ; 128(15): 2948-2959, 2024 Apr 18.
Artículo en Inglés | MEDLINE | ID: mdl-38597180

RESUMEN

Surface-enhanced Raman spectroscopy (SERS) is a powerful Raman technique that provides high selectivity and sensitivity in analyzing the intermolecular interaction of a target compound adsorbed on the surface of a noble nanomaterial, i.e., silver, gold, or copper. Although copper presents a better SERS enhancement than gold and silver, its oxidation in the air is much easier than that of gold and silver. A mixed material between these metals may potentially improve the SERS signal enhancement in this context. In this work, we evaluated the SERS spectra of pyridine (Py) adsorbed on the copper-silver mixed clusters Ag(8-n)Cun (n = 0-8) using density functional theory (DFT) at the PBE functional. The cc-pVDZ-PP basis set was chosen for Ag and Cu, while the cc-pVDZ basis set was used for C, N, and H atoms. Geometrical and electronic structures of the mixed clusters and the Py adsorption configuration on these clusters were computed. The calculated SERS spectra then revealed the influence of the Ag/Cu mixing ratio on the SERS enhancement. As a result, the substituted copper atoms on the silver cluster turned out to be favorable adsorption sites for Py. Interestingly, when the number of Cu atoms increased from n = 0 (pure Ag8 cluster) to n = 5 (Ag3Cu5 cluster), the ring stretching peak (1590 cm-1) of Py significantly increased from 20 to 120 au and then saturated around this value despite increasing the Cu atom number to 8 (pure Cu8 cluster). This observation was extended for other ligands such as pyrazine and 3H-pyrrole. TD-DFT was then employed to clarify the chemical enhancement mechanism. The results obtained hopefully provide helpful information for the design of analytical sensors with lower costs.

2.
Small ; 19(34): e2302045, 2023 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-37165579

RESUMEN

The development of efficient metal-free photocatalysts for the generation of reactive oxygen species (ROS) for sulfur mustard (HD) decontamination can play a vital role against the stockpiling of chemical warfare agents (CWAs). Herein, one novel concept is conceived by smartly choosing a specific ionic monomer and a donor tritopic aldehyde, which can trigger linker-independent regioselective protonation/deprotonation in the polymeric backbone. In this context, the newly developed vinylene-linked ionic polymers (TPA/TPD-Ionic) are further explored for visible-light-assisted detoxification of HD simulants. Time-resolved-photoluminescence (TRPL) study reveals the protonation effect in the polymeric backbone by significantly enhancing the life span of photoexcited electrons. In terms of catalytic performance, TPA-Ionic outperformed TPD-Ionic because of its enhanced excitons formation and charge carrier abilities caused by the donor-acceptor (D-A) backbone and protonation effects. Moreover, the formation of singlet oxygen (1 O2 ) species is confirmed via in-situ Electron Spin Resonance (ESR) spectroscopy and density functional theory (DFT) analysis, which explained the crucial role of solvents in the reaction medium to regulate the (1 O2 ) formation. This study creates a new avenue for developing novel porous photocatalysts and highlights the crucial roles of sacrificial electron donors and solvents in the reaction medium to establish the structure-activity relationship.

3.
J Chem Inf Model ; 62(10): 2365-2377, 2022 05 23.
Artículo en Inglés | MEDLINE | ID: mdl-35522908

RESUMEN

Diterpenoids are abundant and important compounds in Euphorbia species owing to their structural diversity; therefore, in this study, we investigate the modern-concept antioxidant activities, including free-radical scavenging and oxidative DNA damage repairing, of highly oxygenated diterpenoids originating from the aerial part of Euphorbia helioscopia. Four compounds with structural types of ent-abietane, containing a fused furan ring in their structures, including euphelionolide A (1), euphelionolide D (2), euphelionolide I (3), and euphelionolide L (4) are selected. First, the radical-scavenging activity of these compounds was evaluated with two typical radicals HOO• and HO• in water and pentyl ethanoate (PEA, to mimic lipid environment) via three main mechanisms, namely, hydrogen atom transfer (HAT), radical adduct formation (RAF), and single electron transfer. It is found that the studied compounds are able to scavenge free radicals at multiple reactive sites favorably via HAT and RAF mechanisms, in which the former dominates in the case with HOO• while both mechanisms are competitive in the reaction with HO•. Second, chemical repairing of DNA damage is modeled with the H-atom and single electron being transferred from the studied molecules to damaged 2'-deoxyguanosine (2dG) (i.e., 2dG• radicals and 2dG•+ radical cation). Among the four compounds, euphelionolide A is shown as the most effective radical scavenger and also the highest potential species for chemical repairing of radical-damaged DNA in both water and PEA.


Asunto(s)
Diterpenos , Antioxidantes , ADN , Diterpenos/química , Depuradores de Radicales Libres/química , Depuradores de Radicales Libres/farmacología , Radicales Libres , Hidrógeno , Agua
4.
J Phys Chem A ; 125(39): 8529-8541, 2021 Oct 07.
Artículo en Inglés | MEDLINE | ID: mdl-34554758

RESUMEN

Surface-enhanced Raman spectroscopy (SERS) was employed to gain an understanding of the chemical enhancement mechanism of 2,4,5-trichlorophenoxyacetic acid (2,4,5-T), an Agent Orange, adsorbed on a silver substrate surface. Experimental measurements were performed using a micro-Raman spectrophotometer with an excitation wavelength of 532 nm and successfully detected 2,4,5-T at a relatively low concentration of 0.4 nM. Density functional theory (DFT) calculations on the interactions of the 2,4,5-T molecule with some small silver clusters, Agn with n = 4, 8, and 20, as well as with extended Ag surfaces, demonstrate that the most stable adsorption configuration is formed via coordination of Cl9 sites and carbonyl C═O group on the 2,4,5-T ligand to the Ag atoms on surfaces. Analyses of charge transfer mechanism and frontier orbitals distributions show an electron transfer from 2,4,5-T to the cluster in the ground state, and an inversed trend occurs for the excited singlet state process, consequently leading to a chemical enhancement of SERS signals. The obtained results are of importance for subsequent work in guiding the design of mobile sensors specifically used for services of rapid screening and detection of these toxic compounds present in the environment, as well as agricultural and food products. Extensive computations pointed out that small silver clusters, in particular of Ag20 size, can be used as appropriate models for a metal nanoparticle surface.

5.
J Chem Inf Model ; 60(12): 6185-6203, 2020 12 28.
Artículo en Inglés | MEDLINE | ID: mdl-33233887

RESUMEN

Two ferrocenyl derivatives, Fc-CA and Fc-FA, were synthesized by a condensation reaction between the amino ferrocene and hydroxycinnamic acids, that is, caffeic acid (CA) and ferulic acid (FA). The structures and purity of all compounds were characterized by 1H- and 13C NMR spectroscopies, Mass spectrometry (MS), and elemental analysis. The antioxidant properties of Fc-CA and Fc-FA and of its ligand were studied for free radical scavenging activity toward DPPH•, superoxide anion (O2•-), NO•, and ABTS•+ by UV-vis and electron spin resonance spectroscopies. The cytotoxicity of Fc-CA and Fc-FA against MCF-7 and MDA-MB-231 breast cancer cells and MRC-5 human lung fibroblasts cell was higher than that of cisplatin. The geometry and electronic structures of all compounds were then simulated using density functional theory at M05-2X/6-311+G(d,p) level of theory. Thermodynamics of the free radical quenching reactions by common mechanisms reveal the higher antioxidant properties of the Fc-CA and Fc-FA in comparison to their ligands. An in-depth study of the free radical scavenging activity against HOO• and HO• radicals was performed for two of the most favorable and competitive mechanisms, the hydrogen transfer (either hydrogen atom transfer or proton-coupled electron transfer mechanisms) and the radical adduct formation. The in silico studies indicated that ferrocenyl derivatives exhibited prominent binding affinity to protein models in comparison to CA and FA. Their dock scores were notable at ligand binding sites of ERα, Erß, and JAK2 proteins. Dock pose analysis also shed light into the possible mechanism of action for the studied compounds.


Asunto(s)
Antioxidantes , Modelos Teóricos , Antioxidantes/farmacología , Depuradores de Radicales Libres , Radicales Libres , Humanos , Metalocenos , Termodinámica
6.
J Chem Inf Model ; 60(3): 1329-1351, 2020 03 23.
Artículo en Inglés | MEDLINE | ID: mdl-31999921

RESUMEN

This computational and experimental work aims to elucidate physicochemical and photophysical natures of free radical scavenging and ultraviolet radiation (UVR) filtering activities of five terpenoids available in the extract of marine fungus. The antioxidant activities of ochraceopone F (C1), aspertetranone D (C2), cycloechinulin (C3), wasabidienone E (C4), and mactanamide (C5) are evaluated by using density functional theory (DFT) at the M05-2X/6-311++G(d,p) level of theory in the gas phase, water, and pentyl ethanoate (PEA). Double antioxidant mechanisms allowing the second (H+/e-) donation such as double hydrogen atom transfer (dHAT), double single electron transfer-proton transfer (dSET-PT), and double sequential proton loss-electron transfer (dSPL-ET) are considered. Reaction enthalpies (ΔrH0), standard Gibbs free energies (ΔrG0) and potential energy surfaces of reactions toward HOO• radical are then established to evaluate the hydrogen transfer (HT) and radical adduct formation (RAF) mechanisms. The computational results are supported by DPPH• and ABTS•+ antioxidant essays. Results show that all compounds C1-C5 are able to scavenge two free radicals via dHAT, dSET-PT, and dSPL-ET mechanisms. Among the compounds, C3 and C4 represent the most potential antioxidants, especially via HAT and RAF mechanisms in all the reaction media. Their rate constants for both HAT and RAF reactions are remarkably higher than that of Trolox and ascorbic acid. The kinetic calculations on activation Gibbs free energies (ΔG⧧) and rate constants (kTST) based on conventional transition state theory (TST) reveal that HAT and RAF processes are in competition in solvents. Photophysical processes occurring during UVR exposure are investigated using the time dependent density functional theory (TD-DFT) combined with UV-vis experiments. The obtained results highlight the promising activities of C1-C5 in UVR absorption in the ranges of UVA and UVB. Among them, C3 and C4 also show better UV absorption properties with the easiest excitations (band gaps equal to 4.06 and 3.65 eV). This study suggests the natural candidates possibly used in organic sunscreen.


Asunto(s)
Antioxidantes , Rayos Ultravioleta , Teoría Funcional de la Densidad , Hongos , Termodinámica
7.
J Am Chem Soc ; 141(37): 14772-14779, 2019 09 18.
Artículo en Inglés | MEDLINE | ID: mdl-31450888

RESUMEN

We report here, and rationalize, a synergistic effect between a non-noble metal oxide catalyst (CuO) and high-frequency ultrasound (HFUS) on glucose oxidation. While CuO and HFUS are able to independently oxidize glucose to gluconic acid, the combination of CuO with HFUS led to a dramatic change of the reaction selectivity, with glucuronic acid being formed as the major product. By means of density functional theory (DFT) calculations, we show that, under ultrasonic irradiation of water at 550 kHz, the surface lattice oxygen of a CuO catalyst traps H· radicals stemming from the sonolysis of water, making the ring-opening of glucose energetically unfavorable and leaving a high coverage of ·OH radical on the CuO surface, which selectively oxidizes glucose to glucuronic acid. This work also points toward a path to optimize the size of the catalyst particle for an ultrasonic frequency that minimizes the damage to the catalyst, resulting in its successful reuse.

8.
J Chem Inf Model ; 59(2): 766-776, 2019 02 25.
Artículo en Inglés | MEDLINE | ID: mdl-30681326

RESUMEN

The radical scavenging capacities of four new cassaine diterpenoid amides including 3ß-hydroxydinorerythrosuamide (1), 3ß-acetoxydinorerythrosuamide (2), 3ß-tigloyloxydinorerythrosuamide (3), and 6α-hydroxydinorcassamide (4) present in leaf extract and four new cassaine diterpenoid amines namely erythroformine A (5), erythroformine B (6), 6α-hydroxy-nor-cassamine (7), and nor-erythrosuamine (8) recently identified in the extract of the bark of Erythrophleum fordii were elucidated using density functional theory (DFT) method. Different thermochemical properties characterizing antioxidant potential including bond dissociation enthalpy (BDE), proton affinity (PA), and adiabatic ionization potential (IP) were calculated at the B3LYP/6-311G(d,p) level of theory. Scavenging reaction mechanisms of cassaine diterpenes toward HOO• radical including formal hydrogen transfer (FHT; either hydrogen atom transfer (HAT) or proton coupled electron transfer (PCET)), radical adduct formation (RAF), single electron transfer (SET), and proton transfer (PT) were studied in the gas phase, water, and benzene. The potential energy profiles and kinetic calculations for the FHT and RAF reactions were calculated at 298.15 K. The results showed that all the studied compounds present strong antioxidant activity via HAT mechanism with BDEs varying from 69.4 to 77.9 kcal/mol. While solvents have only a slight effect on HAT and RAF mechanisms, SET and PT reactions are likely to occur in polar media. Among the studied compounds, 3 is the most reactive one both for HAT (H-abstraction at C7, Δ H -11.3 kcal/mol) and for RAF (radical addition at C13 = C15 bond, Δ H -5.2 kcal/mol) reactions. The rate constants of these reactions are also comparable with several referenced antioxidants such as Trolox and ascorbic acid.


Asunto(s)
Abietanos/química , Alcaloides/química , Amidas/química , Aminas/química , Productos Biológicos/química , Diterpenos/química , Depuradores de Radicales Libres/química , Teoría Funcional de la Densidad , Cinética , Modelos Moleculares , Conformación Molecular , Solventes/química , Termodinámica
9.
J Phys Chem A ; 123(34): 7491-7498, 2019 Aug 29.
Artículo en Inglés | MEDLINE | ID: mdl-31398028

RESUMEN

This paper has investigated the reaction process concerning pyrene formation from fluoranthene in their electronic ground states. Both aromatic compounds are considered as direct soot precursors. The geometrical parameters, the vibrational frequencies, and the zero-point energies have been calculated using the BMK (Boese-Martin for kinetics) method and the 6-311++G(d,p) basis set. More accurate single-point energies have been obtained using BMK/6-311++G(3df,2p) to retrieve thermodynamic properties (ΔrH°(T) and ΔrG°(T)) over a wide temperature range (298-2500 K). The isomerization reaction of fluoranthene to pyrene is exothermic and spontaneous in standard conditions. The transition states and the possible intermediate species have been located on the singlet potential energy surface in order to determine the reaction mechanism. Two different reaction channels have been investigated and characterized by entrance reaction barriers of about 419 and 771 kJ mol-1 for the first and the second reaction pathways, respectively. The present work demonstrates that the first reaction channel is the most energetically favored pathway at high temperatures. Therefore, the kinetic parameters of the forward and reverse first step reactions have been determined in sooting flame conditions.

10.
Chem Asian J ; : e202400515, 2024 Jun 20.
Artículo en Inglés | MEDLINE | ID: mdl-38899858

RESUMEN

Two hydroxy rich hypercrosslinked POPs, namely Ph/Tt-POP have been developed by facile one-pot condensation polymerization strategy. The high surface areas of both the Ph/Tt-POP (1057 and 893 m2g-1, respectively), and the heteroatom functionality in the POP framework instigated us to explore our material for CO2 adsorption study. The CO2 uptake capacities in Ph/Tt-POP are found to be 2.45 and 2.2 mmol g-1, at 273 K respectively. in-situ static 13C NMR experiment shows that CO2 molecules in Tt-POP appear to be less mobile than those in Ph-POP which probably due to the presence of triazine functional groups along with high abundant -OH groups in the Tt-POP framework. An in-depth study of the CO2 adsorption mechanism by density functional theory (DFT) calculations also shows that CO2 adsorption at the cages formed by two benzyl rings represents the most stable interaction and CO2 molecule is more favorably adsorbed on the Ph-POP with the more negative interaction energies values compared to that of Tt-POP. Non-covalent interaction (NCI) plot revealed that CO2 molecule is adsorbed more on the Ph-POP than Tt-POP, which can be explained by hydrogen bond formation in case of Tt-POP repeating units turning aside CO2 molecule to interact with the Ph component.

11.
Chemosphere ; 350: 141085, 2024 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-38163466

RESUMEN

The oxidation of the common pesticide chlorpyrifos (CPF) initiated by HO● radical and the risks of its degradation products were studied in the gaseous and aqueous phases via computational approaches. Oxidation mechanisms were investigated, including H-, Cl-, CH3- abstraction, HO●-addition, and single electron transfer. In both phases, HO●-addition at the C of the pyridyl ring is the most energetically favorable and spontaneous reaction, followed by H-abstraction reactions at methylene groups (i.e., at H19/H21 in the gas phase and H22/H28 in water). In contrast, other abstractions and electron transfer reactions are unfavorable. However, regarding the kinetics, the significant contribution to the oxidation of CPF is made from H-abstraction channels, mostly at the hydrogens of the methylene groups. CPF can be decomposed in a short time (5-8 h) in the gas phase, and it is more persistent in natural water with a lifetime between 24 days and 66 years, depending on the temperature and HO● concentration. Subsequent oxidation of the essential radical products with other oxidizing reagents, i.e., HO●, NO2●, NO●, and 3O2, gave primary neutral products P1-P15. Acute and chronic toxicity calculations estimate very toxic levels for CPF and two degradation products, P7w and P12w, in aquatic systems. The neurotoxicity of these products was investigated by docking and molecular dynamics. P7w and P12w show the most significant binding scores with acetylcholinesterases, while P8w and P13w are with butyrylcholinesterase enzyme. Finally, molecular dynamics illustrate stable interactions between CPF degradants and cholinesterase enzyme over a 100 ns time frame and determine P7w as the riskiest degradant to the neural developmental system.


Asunto(s)
Cloropirifos , Insecticidas , Plaguicidas , Cloropirifos/toxicidad , Butirilcolinesterasa , Oxidación-Reducción , Agua , Insecticidas/toxicidad , Inhibidores de la Colinesterasa
12.
R Soc Open Sci ; 10(6): 230114, 2023 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-37293362

RESUMEN

The oxidation of L-proline (Pro) by HO● radical in water and the influence of transition metal ions on this process has been revisited by using the density functional theory (DFT) method at the M05-2X/6-311 + + G(3df,3pd)//M05-2X/6-311 + + G(d,p) level of theory at the temperature of 298.15 K. The main reactive sites of the HO●-initiated oxidation of Pro via hydrogen atom transfer (HAT) reactions are at the ß- and γ-carbon, with the branching ratios being 44.6% and 39.5%, respectively. The overall rate constant at 298.15 K is 6.04 × 108 M-1 s-1. In addition, Pro tends to form stable complexes with both Fe and Cu ions via the -COO functional group of dipole-salt form. The most stable Cu(II)-Pro complexes have high oxidant risks in enhancing the HO● formation in the presence of reducing agents. Besides this, the high oxidation state metal complexes, i.e. Fe(III)-Pro and Cu(II)-Pro, may be oxidized by HO● radical via HAT reactions but with a lower rate constant than that of free-Pro. By contrast, the low oxidation state metal complexes (i.e. Fe(II)-Pro and Cu(I)-Pro) have higher oxidation risks than the free ligands, and thus, the complexation enhances the oxidation of Pro amino acid.

13.
Chemosphere ; 312(Pt 1): 137234, 2023 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-36375615

RESUMEN

The oxidation of widely-used herbicide metazachlor (MTZ) by hydroxyl radical (HO•) in the gas and the aqueous phases was investigated in terms of mechanistic and kinetic behaviors using the M06-2X/6-311++G (3df, 3pd)//M06-2X/6-31 + G (d,p) level of theory over the temperature range 250-400 K. The formal hydrogen transfer, HO•-addition, and single electron transfer mechanisms were considered. The overall rate constants in the gas phase range from 8.40 × 1010 to 8.31 × 109 M-1 s-1 at the temperature from 250 to 400 K, respectively, while the ones in the aqueous phase are close to diffusion-controlled rates, with diffusion-corrected rate constants being 1.31 × 109 to 1.27 × 109 M-1 s-1. The formal hydrogen transfer mechanism is the most dominant in the gas phase, whereas the HO•-addition is the most favorable in the aqueous phase. The H-abstraction at two methyl groups and the HO•-addition to C11 and C12 atoms (pyrazole ring), C16 and C18 atoms (benzyl ring) are significant. The short lifetime in the environment, equal to only 4.16 h, requires more attention to this herbicide compound, whereas its lifetime in the aqueous condition varies sharply from half second to several thousand days depending on the HO• concentration. The ecotoxicity estimation of MTZ and its principal transformation products to aquatic organisms suggests that they are harmful or toxic substances. Moreover, the MTZ is a developmental toxicant and mutagenicity-positive, while its decomposed products are developmental toxicants with no mutagenic toxicity. Their bioaccumulation in aquatic organisms is negligible.


Asunto(s)
Herbicidas , Radical Hidroxilo , Gases , Herbicidas/toxicidad , Cinética , Agua , Oxidación-Reducción , Hidrógeno
14.
Environ Sci Process Impacts ; 25(12): 2042-2056, 2023 Dec 13.
Artículo en Inglés | MEDLINE | ID: mdl-37850503

RESUMEN

Phosmet is an organophosphorus insecticide widely used in agriculture to control a range of insects; recently, it was banned by the European Union in 2022 due to its harmful effects. However, its environmental degradation and fate have not yet been evident. Thus, phosmet oxidation by HO˙ radicals was theoretically studied in this work using the DFT approach at the M06-2X/6-311++G(3df,3pd)//M06-2X/6-31+G(d,p) level of theory. Three different mechanisms were considered, including formal hydrogen transfer (FHT), radical adduct formation (RAF), and single electron transfer (SET). The mechanisms, kinetics, and lifetime were studied in the gas and aqueous phases, in addition to its ecotoxicity evaluation. The results show that FHT reactions were dominant in the gas phase, while RAF was more favourable in the aqueous phase at 298 K, while SET was negligible. The branching ratio indicated that H-abstractions at the methyl and the methylene groups were the most predominant, while the most favourable HO˙-addition was observed at the phosphorus atom of the dithiophosphate group. The overall rate constant values varied from 1.2 × 109 (at 283 K) to 1.40 × 109 M-1 s-1 (at 323 K) in the aqueous phase and from 6.29 × 1010 (at 253 K) to 1.32 × 1010 M-1 s-1 (at 323 K) in the gas phase. The atmospheric lifetime of phosmet is about 6 hours at 287 K, while it can persist from a few seconds to several years depending on the temperature and [HO˙] concentration in the aqueous environment. The QSAR-based ecotoxicity evaluation indicates that phosmet and its degradation products are all dangerous to aquatic organisms, although the products are less toxic than phosmet. However, they are generally developmental toxicants and mutagenicity-negative compounds.


Asunto(s)
Insecticidas , Fosmet , Agua , Compuestos Organofosforados , Oxidación-Reducción , Cinética , Modelos Teóricos , Radical Hidroxilo
15.
Phytochemistry ; 199: 113176, 2022 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-35390394

RESUMEN

Primary and secondary antioxidant activities of pyridoxal have been investigated by using density functional theory (DFT) at the M05-2X level combined with 6-311++G(d,p) basis set for non-metallic atoms and LanL2DZ for metallic ions. The former has been examined by its free radical scavenging activity towards HOO●, HO●, and NO2●via different mechanisms including formal hydrogen transfer (FHT), proton transfer (PT), single electron transfer (SET), and radical adduct formation (RAF). The latter has been accomplished through its transition metal-chelating ability with Fe(III)/Fe(II) and Cu(II)/Cu(I) ions. The results show that pyridoxal illustrates as an efficient radical scavenger, especially, for HO● and NO2● in water. The overall rate constants (koverall) for the reactions with HOO●, HO●, and NO2● radicals are 1.30 × 104, 5.76 × 109, and 1.43 × 109 M-1s-1, respectively. The SET from the anionic state is the most dominant for the HOO● and NO2● scavenging reactions, while both RAF and SET contribute largely to the reaction with highly reactive HO● radicals. Moreover, the anionic form of pyridoxal demonstrates a better role as a metal chelator than the neutral. However, the pro-oxidant risks of the formed complexes could be observed if there are superoxide radical anion (O2●-) and ascorbate (Asc-) in aqueous media.


Asunto(s)
Depuradores de Radicales Libres , Piridoxal , Quelantes , Compuestos Férricos , Dióxido de Nitrógeno , Especies Reactivas de Oxígeno , Superóxidos
16.
R Soc Open Sci ; 9(9): 220316, 2022 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-36117865

RESUMEN

Hydroxyl radical (HO·) formation initiated by the Fenton-type reactions of Fe and Cu complexes of l-leucine (Leu) amino acid as well as its oxidation reaction by HO· was computationally investigated by using the density functional theory method at the M05-2X/6-311++G(3df,2pd)//M05-2X/6-311++G(d,p) level of theory in the aqueous phase. The results showed that dipole-salt is the main form of Leu in the physiological condition. Leu exhibits high chelating potential towards both Fe(III)/Fe(II) and Cu(II)/Cu(I) ions with the most favourable coordinating positions at two oxygen atoms of the -COO functional group. Furthermore, the Leu-ions complexes show a high risk of HO· formation via Fenton-like reactions, especially when ascorbate anion exists in the environment as a reducing agent. Finally, the oxidation reaction of l-leucine by HO· demonstrated a relatively high overall apparent reaction rate, k overall, being 1.18 × 109 M-1 s-1, in which formal hydrogen transfer reactions of the dipole-salt form occur as the primary mechanism. Consequently, the Leu oxidation by HO· radical can be promoted by the Fenton reaction enhancement of its transition metal complexes.

17.
Chem Commun (Camb) ; 58(56): 7789-7792, 2022 Jul 12.
Artículo en Inglés | MEDLINE | ID: mdl-35734934

RESUMEN

Herein, we demonstrate the successful construction of two Fe-metalated porous organic polymers having planar (Fe-Tt-POP) and non-planar (Fe-Rb-POP) geometry via the ternary copolymerization strategy for the catalytic oxidative decontamination of different sulfur-based mustard gas simulants (HD). Fe-Tt-POP exhibits superior catalytic performance for the oxidation of thioanisole (TA) in comparison with Fe-Rb-POP. Interestingly, this activity difference can be further explored by in situ operando DRIFTS and DFT computational studies.


Asunto(s)
Sustancias para la Guerra Química , Gas Mostaza , Metalocenos , Polímeros , Porosidad
18.
Nanoscale ; 14(4): 1505-1519, 2022 Jan 27.
Artículo en Inglés | MEDLINE | ID: mdl-35029265

RESUMEN

Heteroatom-rich porous-organic-polymers (POPs) comprising highly cross-linked robust skeletons with high physical and thermal stability, high surface area, and tunable pore size distribution have garnered significant research interest owing to their versatile functionalities in a wide range of applications. Here, we report a newly developed organogel-assisted porous-organic-polymer (POP) supported Cu catalyst (Cu@TpRb-POP). The organogel was synthesized via a temperature induced gelation strategy, employing Schiff-base coupling between 2,4,6-triformylphloroglucinol aldehyde (Tp) and pararosaniline base (Rb). The gel is subsequently transformed to hierarchical porous organic structures without the use of any additive, thereby offering advantageous features including extremely low density, high surface area, a highly cross-linked framework, and a heteroatom-enriched backbone of the polymer. During the semi-hydrogenation of terminal and internal alkynes, the Cu@TpRb-POP-B catalyst with Cu embedded in the TpRb-POP structure consistently demonstrated improved selectivity towards alkenes compared to Cu@TpRb-POP-A, which contains Cu NPs exposed at the exterior surfaces of the POP support. Additionally, Cu@TpRb-POP-B showed higher stability and reusability than Cu@TpRb-POP-A. The superior performance of the Cu@TpRb-POP-B catalyst is attributed to the steric hindrance effect, which controls the product selectivity, as well as the synergistic interaction between the heteroatom-rich POP framework and the embedded Cu NPs. Both the effects are corroborated by experimental characterization of the catalysts and density functional theory (DFT) calculations.

19.
ACS Appl Mater Interfaces ; 14(33): 37620-37636, 2022 Aug 24.
Artículo en Inglés | MEDLINE | ID: mdl-35944163

RESUMEN

Anthropogenic carbon dioxide (CO2) emission is soaring day by day due to fossil fuel combustion to fulfill the daily energy requirements of our society. The CO2 concentration should be stabilized to evade the deadly consequences of it, as climate change is one of the major consequences of greenhouse gas emission. Chemical fixation of CO2 to other value-added chemicals requires high energy due to its stability at the highest oxidation state, creating a tremendous challenge to the scientific community to fix CO2 and prevent global warming caused by it. In this work, we have introduced a novel monomer-assembly-directed strategy to design va isible-light-responsive conjugated Zn-metalated porous organic polymer (Zn@MA-POP) with a dynamic covalent acyl hydrazone linkage, via a one-pot condensation between the self-assembled monomer 1,3,5-benzenetricarbohydrazide (TPH) and a Zn complex (Zn@COM). We have successfully explored as-synthesized Zn@MA-POP as a potential photocatalyst in visible-light-driven CO2 photofixation with styrene epoxide (SE) to styrene carbonate (SC). Nearly 90% desired product (SC) selectivity has been achieved with our Zn@MA-POP, which is significantly better than that for the conventional Zn@TiO2 (∼29%) and Zn@gC3N4 (∼26%) photocatalytic systems. The excellent light-harvesting nature with longer lifetime minimizes the radiative recombination rate of photoexcited electrons as a result of extended π-conjugation in Zn@MA-POP and increased CO2 uptake, eventually boosting the photocatalytic activity. Local structural results from a first-shell EXAFS analysis reveals the existence of a Zn(N2O4) core structure in Zn@MA-POP, which plays a pivotal role in activating the epoxide ring as well as capturing the CO2 molecules. An in-depth study of the POP-CO2 interaction via a density functional theory (DFT) analysis reveals two feasible interactions, Zn@MA-POP-CO2-A and Zn@MA-POP-CO2-B, of which the latter has a lower relative energy of 0.90 kcal/mol in comparison to the former. A density of states (DOS) calculation demonstrates the lowering of the LUMO energy (EL) of Zn@MA-POP by 0.35 and 0.42 eV, respectively, for the two feasible interactions, in comparison to Zn@COM. Moreover, the potential energy profile also unveils the spontaneous and exergonic photoconversion pathways for the SE to SC conversion. Our contribution is expected to spur further interest in the precise design of visible-light-active conjugated porous organic polymers for CO2 photofixation to value-added chemicals.

20.
RSC Adv ; 12(3): 1499-1514, 2022 Jan 05.
Artículo en Inglés | MEDLINE | ID: mdl-35425185

RESUMEN

Direct and indirect antioxidant activities of rosmarinic acid (RA) based on HOO˙/CH3OO˙ radical scavenging and Fe(iii)/Fe(ii) ion chelation were theoretically studied using density functional theory at the M05-2X/6-311++G(2df,2p) level of theory. First, four antioxidant mechanisms including hydrogen atom transfer (HAT), radical adduct formation (RAF), proton loss (PL) and single electron transfer (SET) were investigated in water and pentyl ethanoate (PEA) phases. Regarding the free radical scavenging mechanism, HAT plays a decisive role with overall rate coefficients of 1.84 × 103 M-1 s-1 (HOO˙) and 4.49 × 103 M-1 s-1 (CH3OO˙) in water. In contrast to PL, RAF and especially SET processes, the HAT reaction in PEA is slightly more favorable than that in water. Second, the [Fe(iii)(H2O)6]3+ and [Fe(ii)(H2O)6]2+ ion chelating processes in an aqueous phase are both favorable and spontaneous especially at the O5, site-1, and site-2 positions with large negative Δr G 0 values and great formation constant K f. Finally, the pro-oxidant risk of RA- was also considered via the Fe(iii)-to-Fe(ii) complex reduction process, which may initiate Fenton-like reactions forming reactive HO˙ radicals. As a result, RA- does not enhance the reduction process when ascorbate anions are present as reducing agents, whereas the pro-oxidant risk becomes remarkable when superoxide anions are found. The results encourage further attempts to verify the speculation using more powerful research implementations of the antioxidant activities of rosmarinic acid in relationship with its possible pro-oxidant risks.

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