RESUMEN
Influenza hemagglutinin (HA) is the canonical type I viral envelope glycoprotein and provides a template for the membrane-fusion mechanisms of numerous viruses. The current model of HA-mediated membrane fusion describes a static "spring-loaded" fusion domain (HA2) at neutral pH. Acidic pH triggers a singular irreversible conformational rearrangement in HA2 that fuses viral and cellular membranes. Here, using single-molecule Förster resonance energy transfer (smFRET)-imaging, we directly visualized pH-triggered conformational changes of HA trimers on the viral surface. Our analyses reveal reversible exchange between the pre-fusion and two intermediate conformations of HA2. Acidification of pH and receptor binding shifts the dynamic equilibrium of HA2 in favor of forward progression along the membrane-fusion reaction coordinate. Interaction with the target membrane promotes irreversible transition of HA2 to the post-fusion state. The reversibility of HA2 conformation may protect against transition to the post-fusion state prior to arrival at the target membrane.
Asunto(s)
Membrana Celular/metabolismo , Glicoproteínas Hemaglutininas del Virus de la Influenza/química , Virus de la Influenza A/fisiología , Gripe Humana/metabolismo , Imagen Individual de Molécula/métodos , Células A549 , Transferencia Resonante de Energía de Fluorescencia/métodos , Células HEK293 , Glicoproteínas Hemaglutininas del Virus de la Influenza/metabolismo , Hemaglutininas/metabolismo , Humanos , Concentración de Iones de Hidrógeno , Gripe Humana/virología , Unión Proteica , Conformación Proteica , Internalización del VirusRESUMEN
High-acuity αßT cell receptor (TCR) recognition of peptides bound to major histocompatibility complex molecules (pMHCs) requires mechanosensing, a process whereby piconewton (pN) bioforces exert physical load on αßTCR-pMHC bonds to dynamically alter their lifetimes and foster digital sensitivity cellular signaling. While mechanotransduction is operative for both αßTCRs and pre-TCRs within the αßT lineage, its role in γδT cells is unknown. Here, we show that the human DP10.7 γδTCR specific for the sulfoglycolipid sulfatide bound to CD1d only sustains a significant load and undergoes force-induced structural transitions when the binding interface-distal γδ constant domain (C) module is replaced with that of αß. The chimeric γδ-αßTCR also signals more robustly than does the wild-type (WT) γδTCR, as revealed by RNA-sequencing (RNA-seq) analysis of TCR-transduced Rag2-/- thymocytes, consistent with structural, single-molecule, and molecular dynamics studies reflective of γδTCRs as mediating recognition via a more canonical immunoglobulin-like receptor interaction. Absence of robust, force-related catch bonds, as well as γδTCR structural transitions, implies that γδT cells do not use mechanosensing for ligand recognition. This distinction is consonant with the fact that their innate-type ligands, including markers of cellular stress, are expressed at a high copy number relative to the sparse pMHC ligands of αßT cells arrayed on activating target cells. We posit that mechanosensing emerged over â¼200 million years of vertebrate evolution to fulfill indispensable adaptive immune recognition requirements for pMHC in the αßT cell lineage that are unnecessary for the γδT cell lineage mechanism of non-pMHC ligand detection.
Asunto(s)
Mecanotransducción Celular , Receptores de Antígenos de Linfocitos T gamma-delta/química , Receptores de Antígenos de Linfocitos T gamma-delta/metabolismo , Secuencia de Aminoácidos , Animales , Perfilación de la Expresión Génica , Humanos , Ligandos , Ratones , Dominios Proteicos , Estabilidad Proteica , Estructura Secundaria de Proteína , Receptores de Antígenos de Linfocitos T alfa-beta/química , Receptores de Antígenos de Linfocitos T alfa-beta/metabolismo , Transducción de Señal , Imagen Individual de Molécula , Linfocitos T/metabolismo , Timocitos/metabolismo , Timo/metabolismo , Transcriptoma/genéticaRESUMEN
The Ebola virus (EBOV) envelope glycoprotein (GP) is a membrane fusion machine required for virus entry into cells. Following endocytosis of EBOV, the GP1 domain is cleaved by cellular cathepsins in acidic endosomes, removing the glycan cap and exposing a binding site for the Niemann-Pick C1 (NPC1) receptor. NPC1 binding to cleaved GP1 is required for entry. How this interaction translates to GP2 domain-mediated fusion of viral and endosomal membranes is not known. Here, using a bulk fluorescence dequenching assay and single-molecule Förster resonance energy transfer (smFRET)-imaging, we found that acidic pH, Ca2+, and NPC1 binding synergistically induce conformational changes in GP2 and permit virus-liposome lipid mixing. Acidic pH and Ca2+ shifted the GP2 conformational equilibrium in favor of an intermediate state primed for NPC1 binding. Glycan cap cleavage on GP1 enabled GP2 to transition from a reversible intermediate to an irreversible conformation, suggestive of the postfusion 6-helix bundle; NPC1 binding further promoted transition to the irreversible conformation. Thus, the glycan cap of GP1 may allosterically protect against inactivation of EBOV by premature triggering of GP2.
Asunto(s)
Ebolavirus/fisiología , Fusión de Membrana , Proteínas del Envoltorio Viral/química , Proteínas del Envoltorio Viral/metabolismo , Regulación Alostérica , Calcio/metabolismo , Ebolavirus/química , Ebolavirus/genética , Ebolavirus/metabolismo , Transferencia Resonante de Energía de Fluorescencia , Células HEK293 , Humanos , Concentración de Iones de Hidrógeno , Péptidos y Proteínas de Señalización Intracelular/metabolismo , Proteína Niemann-Pick C1 , Polisacáridos/metabolismo , Unión Proteica , Conformación Proteica , Dominios Proteicos , Proteínas del Envoltorio Viral/genética , Internalización del VirusRESUMEN
The αß T-cell receptor (TCR) on each T lymphocyte mediates exquisite specificity for a particular foreign peptide bound to a major histocompatibility complex molecule (pMHC) displayed on the surface of altered cells. This recognition stimulates protection in the mammalian host against intracellular pathogens, including viruses, and involves piconewton forces that accompany pMHC ligation. Physical forces are generated by T-lymphocyte movement during immune surveillance as well as by cytoskeletal rearrangements at the immunological synapse following cessation of cell migration. The mechanistic explanation for how TCRs distinguish between foreign and self-peptides bound to a given MHC molecule is unclear: peptide residues themselves comprise few of the TCR contacts on the pMHC, and pathogen-derived peptides are scant among myriad self-peptides bound to the same MHC class arrayed on infected cells. Using optical tweezers and DNA tether spacer technology that permit piconewton force application and nanometer scale precision, we have determined how bioforces relate to self versus nonself discrimination. Single-molecule analyses involving isolated αß-heterodimers as well as complete TCR complexes on T lymphocytes reveal that the FG loop in the ß-subunit constant domain allosterically controls both the variable domain module's catch bond lifetime and peptide discrimination via force-driven conformational transition. In contrast to integrins, the TCR interrogates its ligand via a strong force-loaded state with release through a weakened, extended state. Our work defines a key element of TCR mechanotransduction, explaining why the FG loop structure evolved for adaptive immunity in αß but not γδTCRs or immunoglobulins.
Asunto(s)
Complejo Mayor de Histocompatibilidad , Péptidos/química , Receptores de Antígenos de Linfocitos T alfa-beta/química , Secuencia de Aminoácidos , Modelos Moleculares , Pinzas Ópticas , Homología de Secuencia de AminoácidoRESUMEN
The pre-T cell receptor (pre-TCR) is a pTα-ß heterodimer functioning in early αß T cell development. Although once thought to be ligand-autonomous, recent studies show that pre-TCRs participate in thymic repertoire formation through recognition of peptides bound to major histocompatibility molecules (pMHC). Using optical tweezers, we probe pre-TCR bonding with pMHC at the single molecule level. Like the αßTCR, the pre-TCR is a mechanosensor undergoing force-based structural transitions that dynamically enhance bond lifetimes and exploiting allosteric control regulated via the Cß FG loop region. The pre-TCR structural transitions exhibit greater reversibility than TCRαß and ordered force-bond lifetime curves. Higher piconewton force requires binding through both complementarity determining region loops and hydrophobic Vß patch apposition. This patch functions in the pre-TCR as a surrogate Vα domain, fostering ligand promiscuity to favor development of ß chains with self-reactivity but is occluded by α subunit replacement of pTα upon αßTCR formation. At the double negative 3 thymocyte stage where the pre-TCR is first expressed, pre-TCR interaction with self-pMHC ligands imparts growth and survival advantages as revealed in thymic stromal cultures, imprinting fundamental self-reactivity in the T cell repertoire. Collectively, our data imply the existence of sequential mechanosensor αßTCR repertoire tuning via the pre-TCR.
Asunto(s)
Regiones Determinantes de Complementariedad , Regulación de la Expresión Génica/fisiología , Receptores de Antígenos de Linfocitos T alfa-beta , Timocitos , Animales , Regiones Determinantes de Complementariedad/biosíntesis , Regiones Determinantes de Complementariedad/química , Regiones Determinantes de Complementariedad/genética , Ratones , Ratones Noqueados , Estructura Secundaria de Proteína , Receptores de Antígenos de Linfocitos T alfa-beta/biosíntesis , Receptores de Antígenos de Linfocitos T alfa-beta/química , Receptores de Antígenos de Linfocitos T alfa-beta/genética , Timocitos/química , Timocitos/citología , Timocitos/metabolismoRESUMEN
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike is the fusion machine for host cell entry. Still, the mechanism by which spike protein interacts with the target lipid membrane to facilitate membrane fusion during entry is not fully understood. Here, using steady-state membrane fusion and single-molecule fluorescence resonance energy transfer imaging of spike trimers on the surface of SARS-CoV-2 pseudovirion, we directly show that spike protein interacts with phosphatidylserine (PS) lipid in the target membrane for mediating fusion. We observed that the fusion peptide of the spike S2 domain interacts with the PS lipid of the target membrane. Low pH and Ca2+ trigger the spike conformational change and bring fusion peptide in close proximity to the PS lipid of the membrane. The binding of the spike with PS lipid of its viral membrane (cis interaction) impedes the fusion activation. PS on the target membrane promotes spike binding via trans interaction, prevents the cis interaction, and accelerates fusion. Sequestering or absence of PS lipid abrogates the spike-mediated fusion process and restricts SARS-CoV-2 infectivity. We found that PS-dependent interaction for fusion is conserved across all the SARS-CoV-2 spike variants of concern (D614G, Alpha, Beta, Delta, and Omicron). Our study suggests that PS lipid is indispensable for SARS-CoV-2 spike-mediated virus and target membrane fusion for entry, and restricting PS interaction with spike inhibits the SARS-CoV-2 spike-mediated entry. Therefore, PS is an important cofactor and acts as a molecular beacon in the target membrane for SARS-CoV-2 entry. IMPORTANCE: The role of lipids in the host cell target membrane for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) entry is not clear. We do not know whether SARS-CoV-2 spike protein has any specificity in terms of lipid for membrane fusion reaction. Here, using in vitro reconstitution of membrane fusion assay and single-molecule fluorescence resonance energy transfer imaging of SARS-CoV-2 spike trimers on the surface of the virion, we have demonstrated that phosphatidylserine (PS) lipid plays a key role in SARS-CoV-2 spike-mediated membrane fusion reaction for entry. Membrane-externalized PS lipid strongly promotes spike-mediated membrane fusion and COVID-19 infection. Blocking externalized PS lipid with PS-binding protein or in the absence of PS, SARS-CoV-2 spike-mediated fusion is strongly inhibited. Therefore, PS is an important target for restricting viral entry and intervening spike, and PS interaction presents new targets for COVID-19 interventions.
RESUMEN
The effect of the room temperature ionic liquid (RTIL) 1-pentyl-3-methyl-imidazolium bromide ([pmim][Br]) on the unfolding of a protein, human serum albumin (HSA), is studied by fluorescence correlation spectroscopy (FCS). The structural fluctuations of the protein exhibit three characteristic time constants, namely, ~3, ~35 and ~260 µs. On addition of the RTIL, the dynamics become slightly slower, with time constants of ~5, ~40 and ~350 µs. The two fast components (3 and 35 µs in the absence of RTIL and 5 and 40 µs in the presence of RTIL) are assigned to chain motion of the protein. The slowest component (260 or 350 µs) may arise from detachment (unbinding) of the non-covalent dye from the protein. In the absence of RTIL--and on addition of guanidinium hydrochloride (GdnHCl)--as the protein unfolds, the contribution of the fastest component increases rapidly from 10% at 1 M to 40% at 6 M, and its time constant decreases from 3 µs to 1 µs. In the presence of RTIL, the addition of GdnHCl causes significant changes in both the structure (CD spectrum) and the time constants of conformational fluctuation. In the presence of the RTIL, the addition of GdnHCl gives rise to a very slow component (1025 µs in 1 M and 560 µs in 6 M GdnHCl). It is proposed that the guanidinium cation (GdnH(+)) repels the imidazolium cation ([pmim](+)) at the protein surface, and this causes a change in the structure and dynamics of the protein. On addition of 6 M GdnHCl, the diffusion coefficient of C153 bound to HSA decreases. The hydrodynamic radius of the denatured protein (in 6 M GdnHCl) is larger than that of the native protein (about 1.75 times in the absence of RTIL and 2.6 times in the presence of RTIL).
Asunto(s)
Imidazoles/química , Líquidos Iónicos/química , Albúmina Sérica/química , Cationes , Dicroismo Circular , Cumarinas , Difusión , Colorantes Fluorescentes , Guanidina/química , Humanos , Conformación Proteica , Desnaturalización Proteica , Pliegue de Proteína , Desplegamiento Proteico , Espectrometría de Fluorescencia , TemperaturaRESUMEN
Mutations in the spike protein generated a highly infectious and transmissible D614G variant, which is present in newly evolved fast-spreading variants. The D614G, Alpha, Beta, and Delta spike variants of SARS-CoV-2 appear to expedite membrane fusion process for entry, but the mechanism of spike-mediated fusion is unknown. Here, we reconstituted an in vitro pseudovirus-liposome fusion reaction and report that SARS-CoV-2 wild-type spike is a dynamic Ca2+ sensor, and D614G mutation enhances dynamic calcium sensitivity of spike protein for facilitating membrane fusion. This dynamic calcium sensitivity for fusion is found to be higher in Alpha and Beta variants and highest in Delta spike variant. We find that efficient fusion is dependent on Ca2+ concentration at low pH, and the fusion activity of spike dropped as the Ca2+ level rose beyond physiological levels. Thus, evolved spike variants may control the high fusion probability for entry by increasing Ca2+ sensing ability.
Asunto(s)
COVID-19 , SARS-CoV-2 , Calcio , Humanos , Fusión de Membrana , Glicoproteína de la Espiga del Coronavirus/genética , Glicoproteína de la Espiga del Coronavirus/metabolismoRESUMEN
The deuterium isotopic effect on the structure and solvation dynamics of the protein, human serum albumin (HSA), has been studied by using circular dichroism (CD), femtosecond up-conversion, FRET, and single-molecule spectroscopy. The CD spectra suggest that D(2)O affects the structure of HSA, leading to a 20% decrease in the helical structure. The FRET study indicates that the distance of C153 from the lone tryptophan residue of HSA is quite similar (≈21 Å) in H(2)O and D(2)O, and hence, the location of the probe in the protein remains the same in the two solvents. The single-molecule study suggests that coumarin 153 (C153) binds almost exclusively (>96%) to one site of HSA. Solvation dynamics of C153 in HSA is found to be markedly retarded in D(2)O compared with H(2)O. In H(2)O, the solvation of C153 bound to HSA is found to be biexponential with one component of 7 ps (30%) and a long component of 350 ps (70%). In D(2)O, we detected a short component of 4 ps (41%) and a long component of 950 ps (59%). Thus, the ultraslow component of the solvation dynamics of C153 bound to HSA in D(2)O (950 ps) is 2.5-fold slower than that in H(2)O (350 ps). The marked deuterium isotope effect has been ascribed to water molecules confined in the protein environment and to a lesser extent to the structural modification of protein by D(2)O.
Asunto(s)
Albúmina Sérica/química , Solventes/química , Dicroismo Circular , Cumarinas/química , Deuterio/química , Medición de Intercambio de Deuterio , Transferencia Resonante de Energía de Fluorescencia , Humanos , Unión ProteicaRESUMEN
Dynamic light scattering studies indicate that addition of a room temperature ionic liquid (RTIL, [pmim][Br]), to a triblock copolymer (P123) micelle leads to the formation of giant P123-RTIL clusters of size (diameter) 40 nm in 0.9 M and 3500 nm (3.5 microm) in 3 M RTIL. They are much larger than a P123 micelle ( approximately 18 nm) or [pmim][Br] (1.3 nm). Dynamics in different regions of the P123-RTIL aggregate is probed by variation of the excitation wavelength (lambda(ex)) using femtosecond up-conversion. For lambda(ex) = 375 nm, the nonpolar core of the P123-RTIL aggregate is preferentially excited while lambda(ex) = 435 nm selects the polar corona region. Solvation dynamics and anisotropy decay of coumarin 480 (C480) in a P123-RTIL giant aggregate are markedly different from those in either P123 micelle or those in an aqueous solution of the RTIL. For lambda(ex) = 405 nm in 5 wt % P123 and 0.9 M RTIL average rotational time, (
RESUMEN
Fluorescence resonance energy transfer (FRET) from coumarin 480 (C480) to rhodamine 6G (R6G) is studied in a room temperature ionic liquid (RTIL) microemulsion by picosecond and femtosecond emission spectroscopy. The microemulsion is comprised of the RTIL 1-pentyl-3-methylimidazolium tetraflouroborate, [pmim][BF4], in TX-100/ benzene. We have studied the microemulsion with and without water. The time constants of FRET were obtained from the risetime of the acceptor (R6G) emission. In the RTIL microemulsion, FRET occurs on multiple time scales: 1, 250, and 3900 ps. In water containing RTIL microemulsion, the rise components are 1.5, 250, and 3900 ps. The 1 and 1.5 ps components are assigned to FRET at a close contact of donor and acceptor (RDA approximately 12 A). This occurs within the highly polar (RTIL/water) pool of the microemulsion. With increase in the excitation wavelength (lambdaex) from 375 to 435 nm, the relative contribution of the ultrafast component of FRET (1 ps) increases from 4% to 100% in the RTIL microemulsion and 12% to 100% in the water containing RTIL microemulsion. It is suggested that at lambdaex = 435 nm, mainly the highly polar RTIL pool is probed where FRET is very fast due to the close proximity of the donor and the acceptor. The very long 3900 ps (RDA approximately 45 A) component may arise from FRET from a donor in the outer periphery of the microemulsion to an acceptor in the polar RTIL pool. The 250 ps component (RDA approximately 29 A) is assigned to FRET from a donor inside the surfactant chains.
RESUMEN
Deuterium isotope effect on the solvation dynamics and fluorescence anisotropy decay of coumarin 153 (C153) bound to dimethyl beta-cyclodextrin (DMB) and trimethyl beta-cyclodextrin (TMB) is studied using femtosecond upconversion. In D(2)O, there is a marked increase in the steady state emission quantum yield and fluorescence lifetime of C153 bound to DMB and TMB. This suggests strong coupling between C153 and D(2)O inside the cyclodextrin cavity. In D(2)O, average solvation time of C153 in DMB is about 1.7 times slower compared to that in water. For TMB in D(2)O, solvation is 1.5 times slower. The deuterium isotope effect on solvation dynamics at long time arises mainly from the longer excited state lifetime. The longest components of solvation dynamics are ascribed to self-diffusion of C153 out of the cyclodextrin cavity. The nearly 1.5 times slower anisotropy decay of C153 bound to DMB and TMB in D(2)O (compared to H(2)O) is attributed to higher viscosity of D(2)O.
RESUMEN
The structure and dynamics of a catanionic vesicle are studied by means of femtosecond up-conversion and dynamic light scattering (DLS). The catanionic vesicle is composed of dodecyl-trimethyl-ammonium bromide (DTAB) and sodium dodecyl sulphate (SDS). The DLS data suggest that 90 % of the vesicles have a diameter of about 400 nm, whereas the diameter of the other 10 % is about 50 nm. The dynamics in the catanionic vesicle are compared with those in pure SDS and DTAB micelles. We also study the dynamics in different regions of the micelle/vesicle by varying the excitation wavelength (lambda(ex)) from 375 to 435 nm. The catanionic vesicle is found to be more heterogeneous than the SDS or DTAB micelles, and hence, the lambda(ex)-dependent variation of the solvation dynamics is more prominent in the first case. The solvation dynamics in the vesicle and the micelles display an ultraslow component (2 and 300 ps, respectively), which arises from the quasibound, confined water inside the micelle, and an ultrafast component (<0.3 ps), which is due to quasifree water at the surface/exposed region. With an increase in lambda(ex), the solvation dynamics become faster. This is manifested in a decrease in the total dynamic solvent shift and an increase in the contribution of the ultrafast component (<0.3 ps). At a long lambda(ex) (435 nm), the surface (exposed region) of a micelle/vesicle is probed, where the solvation dynamics of the water molecules are faster than those in a buried location of the vesicle and the micelles. The time constant of anisotropy decay becomes longer with increasing lambda(ex), in both the catanionic vesicle and the ordinary micelles (SDS and DTAB). The slow rotational dynamics (anisotropy decay) in the polar region (at long lambda(ex)) may be due to the presence of ionic head groups and counter ions.
RESUMEN
Femtosecond solvation dynamics of coumarin 480 (C480) in a mixed micelle is reported. The mixed micelle consists of a triblock copolymer (PEO)20-(PPO) 70-(PEO)20 (Pluronic P123) and an ionic liquid (IL), 1-pentyl-3-methylimidazolium tetrafluoroborate ([pmim][BF4]). At a low concentration (0.3 M), the sparingly water soluble IL ([pmim][BF4]) penetrates the hydrophobic PPO core of the P123 micelles. Thus emission maximum of C480 in the core (accessed at lambdaex=375 nm) in 0.3 M IL is red-shifted by 8 nm from that in its absence and the red edge excitation shift (REES) is large (19+/-1 nm). At a high concentration (0.9 M), the ionic liquid [pmim][BF4] invades both the core and corona region and the mixed micelle exhibits very small REES (3+/-1 nm). Anisotropy decay and solvation dynamics in different regions of the mixed micelle are studied by variation of excitation wavelength (lambda ex). In P123 micelle, the average rotational time (
RESUMEN
Solvation dynamics of coumarin 480 (C480) in the secondary aggregate of a bile salt (sodium deoxycholate, NaDC) is studied using femtosecond up-conversion. The secondary aggregate resembles a long (approximately 40 A) hollow cylinder with a central water-filled tunnel. Different regions of the aggregate are probed by variation of the excitation wavelength (lambdaex) from 375 to 435 nm. The emission maximum of C480 displays an 8 nm red shift as the lambdaex increases from 345 to 435 nm. The 8 nm red edge excitation shift (REES) suggests that the probe (C480) is distributed over regions of varied polarity. Excitation at a short wavelength (375 nm) preferentially selects the probe molecule in the buried locations and exhibits slow dynamics with a major (84%) slow component (3500 ps) and a small (16%) contribution of the ultrafast component (2.5 ps). Excitation at lambdaex=435 nm (red end) corresponds to the exposed sites where solvation dynamics is very fast with a major (73%) ultrafast component (Asunto(s)
Cumarinas/química
, Ácido Desoxicólico/química
, Solventes/química
, Espectrometría de Fluorescencia/métodos
, Agua/química
, Fármacos Gastrointestinales/química
, Indicadores y Reactivos/química
, Estructura Molecular
, Solubilidad
, Factores de Tiempo
RESUMEN
During cell division, the mitotic kinesin-5 Eg5 generates most of the force required to separate centrosomes during spindle assembly. However, Kif15, another mitotic kinesin, can replace Eg5 function, permitting mammalian cells to acquire resistance to Eg5 poisons. Unlike Eg5, the mechanism by which Kif15 generates centrosome separation forces is unknown. Here we investigated the mechanical properties and force generation capacity of Kif15 at the single-molecule level using optical tweezers. We found that the non-motor microtubule-binding tail domain interacts with the microtubule's E-hook tail with a rupture force higher than the stall force of the motor. This allows Kif15 dimers to productively and efficiently generate forces that could potentially slide microtubules apart. Using an in vitro optical trapping and fluorescence assay, we found that Kif15 slides anti-parallel microtubules apart with gradual force buildup while parallel microtubule bundles remain stationary with a small amount of antagonizing force generated. A stochastic simulation shows the essential role of Kif15's tail domain for load storage within the Kif15-microtubule system. These results suggest a mechanism for how Kif15 rescues bipolar spindle assembly.
Asunto(s)
Cinesinas/metabolismo , Microtúbulos/metabolismo , Fenómenos Biomecánicos , Centrosoma/metabolismo , Humanos , Unión ProteicaRESUMEN
The αßTCR was recently revealed to function as a mechanoreceptor. That is, it leverages mechanical energy generated during immune surveillance and at the immunological synapse to drive biochemical signaling following ligation by a specific foreign peptide-MHC complex (pMHC). Here, we review the structural features that optimize this transmembrane (TM) receptor for mechanotransduction. Specialized adaptations include (1) the CßFG loop region positioned between Vß and Cß domains that allosterically gates both dynamic T cell receptor (TCR)-pMHC bond formation and lifetime; (2) the rigid super ß-sheet amalgams of heterodimeric CD3εγ and CD3εδ ectodomain components of the αßTCR complex; (3) the αßTCR subunit connecting peptides linking the extracellular and TM segments, particularly the oxidized CxxC motif in each CD3 heterodimeric subunit that facilitates force transfer through the TM segments and surrounding lipid, impacting cytoplasmic tail conformation; and (4) quaternary changes in the αßTCR complex that accompany pMHC ligation under load. How bioforces foster specific αßTCR-based pMHC discrimination and why dynamic bond formation is a primary basis for kinetic proofreading are discussed. We suggest that the details of the molecular rearrangements of individual αßTCR subunit components can be analyzed utilizing a combination of structural biology, single-molecule FRET, optical tweezers, and nanobiology, guided by insightful atomistic molecular dynamic studies. Finally, we review very recent data showing that the pre-TCR complex employs a similar mechanobiology to that of the αßTCR to interact with self-pMHC ligands, impacting early thymic repertoire selection prior to the CD4(+)CD8(+) double positive thymocyte stage of development.
RESUMEN
Single molecule force manipulation combined with fluorescence techniques offers much promise in revealing mechanistic details of biomolecular machinery. Here, we review force-fluorescence microscopy, which combines the best features of manipulation and detection techniques. Three of the mainstay manipulation methods (optical traps, magnetic traps and atomic force microscopy) are discussed with respect to milestones in combination developments, in addition to highlight recent contributions to the field. An overview of additional strategies is discussed, including fluorescence based force sensors for force measurement in vivo. Armed with recent exciting demonstrations of this technology, the field of combined single-molecule manipulation and single-molecule detection is poised to provide unprecedented views of molecular machinery.
Asunto(s)
Microscopía de Fuerza Atómica/métodos , Imagen Molecular/métodos , Colorantes Fluorescentes/química , Microscopía Fluorescente/métodosRESUMEN
Proteins that recognize and act on specific subsets of microtubules (MTs) enable the varied functions of the MT cytoskeleton. We recently discovered that Kif15 localizes exclusively to kinetochore fibers (K-fibers) or bundles of kinetochore-MTs within the mitotic spindle. It is currently speculated that the MT-associated protein TPX2 loads Kif15 onto spindle MTs, but this model has not been rigorously tested. Here, we show that Kif15 accumulates on MT bundles as a consequence of two inherent biochemical properties. First, Kif15 is self-repressed by its C terminus. Second, Kif15 harbors a nonmotor MT-binding site, enabling dimeric Kif15 to crosslink and slide MTs. Two-MT binding activates Kif15, resulting in its accumulation on and motility within MT bundles but not on individual MTs. We propose that Kif15 targets K-fibers via an intrinsic two-step mechanism involving molecular unfolding and two-MT binding. This work challenges the current model of Kif15 regulation and provides the first account of a kinesin that specifically recognizes a higher-order MT array.
Asunto(s)
Ciclo Celular , Cinesinas/genética , Cinetocoros/metabolismo , Microtúbulos/metabolismo , Huso Acromático/metabolismo , Células HeLa , Humanos , Immunoblotting , Cinesinas/metabolismo , Cinetocoros/ultraestructura , Microscopía Fluorescente , Microtúbulos/ultraestructura , Mitosis , Huso Acromático/ultraestructuraRESUMEN
Kinetics of binding of dyes at different sites of human serum albumin (HSA) has been studied by single-molecule spectroscopy. The protein was immobilized on a glass surface. To probe different binding sites (hydrophobic and hydrophilic) two dyes, coumarin 153 (C153, neutral) and rhodamine 6G (R6G, cationic) were chosen. For both the dyes, a major (ca. 96-98%) and minor (ca. 3%) binding site were detected. Rate constants of association and dissociation were simultaneously determined from directly measuring fluctuations in fluorescence intensity (τ(off) and τ(on)) and from this the equilibrium (binding) constants were calculated. Fluorescence lifetimes at individual sites were obtained from burst-integrated lifetime analysis. Distributions of lifetime histograms for both the probes (C153 and R6G) exhibit two maxima, which indicates the presence of two binding domains in the protein. Unfolding of the protein has been studied by adding guanidinium hydrochloride (GdnHCl) to the solution. It is observed that addition of GdnHCl affects the dissociation and association kinetics and hence, binding equilibrium of the association of C153. However, the effect of binding of R6G is not affected much. It is proposed that GdnHCl affects the hydrophobic binding sites more than the hydrophilic site.