Design of wavelength division multiplexing devices based on tunable edge states of valley photonic crystals.

Wavelength division multiplexing (WDM) devices are key photonic integrated circuit (PIC) elements. Conventional WDM devices based on silicon waveguides and photonic crystals have limited transmittance due to the high loss introduced by the strong backward scattering from defects. In addition, it is challenging to reduce the footprint of those devices. Here we theoretically demonstrate a WDM device in the telecommunication range based on all-dielectric silicon topological valley photonic crystal (VPC) structures. We tune its effective refractive index by tuning the physical parameters of the lattice in the silicon substrate, which can continuously tune the operating wavelength range of the topological edge states, which allows the designing of WDM devices with different channels. The WDM device has two channels (1475 nm-1530 nm and 1583 nm-1637 nm), with contrast ratios of 29.6 dB and 35.3 dB, respectively. We demonstrated highly efficient devices for multiplexing and demultiplexing in a WDM system. The principle of manipulating the working bandwidth of the topological edge states can be generally applied in designing different integratable photonic devices. Thus, it will find broad applications.

Unidirectional transmission of visible region topological edge states in hexagonal boron nitride valley photonic crystals.

Here we theoretically design valley photonic crystals (VPCs) based on two-dimensional (2D) hexagonal boron nitride (hBN) materials, which are able to support topological edge states in the visible region. The edge states can achieve spin-dependent unidirectional transmission with a high forward transmittance up to 0.96 and a transmission contrast of 0.99. We further study the effect of refractive index on transmittance and bandwidth, and it is found that with the increase of refractive index, both transmittance and bandwidth increased accordingly. This study opens new possibilities in designing unidirectional transmission devices in the visible region and will find broad applications.

Palladium-Catalyzed Decarbonylative Cyanation of Carboxylic Acids with TMSCN.

The direct decarbonylative cyanation of benzoic acids with TMSCN was achieved through palladium catalysis. By this strategy, a wide range of nitriles including those with functional groups was synthesized in good to high yields. Moreover, this reaction applied to modifying bioactive molecules such as adapalene, probenecid, telmisartan, and 3-methylflavone-8-carboxylic acid. These results demonstrate that this new reaction has potential synthetic value in organic synthesis.

Genome-Wide Identification of Cyclophilin Gene Family in Cotton and Expression Analysis of the Fibre Development in Gossypium barbadense.

Cyclophilins (CYPs) are a member of the immunophilin superfamily (in addition to FKBPs and parvulins) and play a significant role in peptidyl-prolyl cis-trans isomerase (PPIase) activity. Previous studies have shown that CYPs have important functions in plants, but no genome-wide analysis of the cotton CYP gene family has been reported, and the specific biological function of this gene is still elusive. Based on the release of the cotton genome sequence, we identified 75, 78, 40 and 38 CYP gene sequences from G. barbadense, G. hirsutum, G. arboreum, and G. raimondii, respectively; 221 CYP genes were unequally located on chromosomes. Phylogenetic analysis showed that 231 CYP genes clustered into three major groups and eight subgroups. Collinearity analysis showed that segmental duplications played a significant role in the expansion of CYP members in cotton. There were light-responsiveness, abiotic-stress and hormone-response elements upstream of most of the CYPs. In addition, the motif composition analysis revealed that 49 cyclophilin proteins had extra domains, including TPR (tetratricopeptide repeat), coiled coil, U-box, RRM (RNA recognition motif), WD40 (RNA recognition motif) and zinc finger domains, along with the cyclophilin-like domain (CLD). The expression patterns based on qRT-PCR showed that six CYP expression levels showed greater differences between Xinhai21 (long fibres, G. barbadense) and Ashmon (short fibres, G. barbadense) at 10 and 20 days postanthesis (DPA). These results signified that CYP genes are involved in the elongation stage of cotton fibre development. This study provides a valuable resource for further investigations of CYP gene functions and molecular mechanisms in cotton.

Effect of Tiaoshen Kaiqiao acupuncture in the treatment of ischemic post-stroke depression: a randomized controlled trial.

OBJECTIVE: To observe the effect of Tiaoshen Kaiqiao acupuncture in the treatment of ischemic post-stroke depression. METHODS: This research was a single-blind, positive-controlled trial done in a single entity. Totally 58 patients with ischemic post-stroke depression were randomly divided into two groups. The acupuncture group was given Tiaoshen Kaiqiao acupuncture therapy and placebo starch tablets treatment, while the control group was treated with fluoxetine tablets and body acupuncture treatment. Evaluated the clinical efficacy of the two groups with Hamilton Depression Scale (HAMD), Anti Depression Drug Side Effects Rating Scale (SERS), Clinical Global Impression Scale (CGI) respectively before treatment, the fourth weekend of treatment, the eighth weekend of treatment, the twelfth weekend of treatment. The adverse reactions in two groups were observed and documented. RESULTS: The HAMD scale scores of the two groups in different treatment period were significantly decreased compared with that before treatment (P < 0.05); the score reduction of HAMD scale between the two groups had no significant differences (P > 0.05). There was significant difference between the SERS scores of two groups (P < 0.05); the control group had more adverse reactions, and the score would be increased with the extension of treatment time. Effect index (EI) of CGI in the acupuncture group is better than that of control group (P < 0.05). CONCLUSION: The effects of Tiaoshen Kaiqiao acupuncture and fluoxetine in the treatment of ischemic post-stroke depression were similar, but the former had no obvious adverse reaction and side effects.

Characterization of DNA methyltransferase and demethylase genes in Fragaria vesca.

DNA methylation is an epigenetic modification essential for gene regulations in plants, but understanding on how it is involved in fruit development, especially in non-climacteric fleshy fruit, is limited. The diploid woodland strawberry (Fragaria vesca) is an important model for non-climacteric fruit crops. In this study, we identified DNA methyltransferase genes and demethylase genes in Fragaria vesca and other angiosperm species. In accordance with previous studies, our phylogenetic analyses of those DNA methylation modifiers support the clustering of those genes into several classes. Our data indicate that whole-genome duplications and tandem duplications contributed to the expansion of those DNA methylation modifiers in angiosperms. We have further demonstrated that some DNA methylase and demethylase genes reach their highest expression levels in strawberry fleshy fruits when turning from white to red, suggesting that DNA methylation might undergo a dramatic change at the onset of fleshy fruit-ripening process. In addition, we have observed that expression of some DNA demethylase genes increases in response to various abiotic stresses including heat, cold, drought and salinity. Collectively, our study indicates a regulatory role of DNA methylation in the turning stage of non-climacteric fleshy fruit and responses to environment stimuli, and would facilitate functional studies of DNA methylation in the growth and development of non-climacteric fruits.

Exploring the desumoylation process of SENP1: a study combined MD simulations with QM/MM calculations on SENP1-SUMO1-RanGAP1.

The small ubiquitin-related modifier (SUMO)-specific protease (SENP) processes SUMOs to mature forms and deconjugates them from various modified substrates. Loss of the equilibrium from desumoylation catalyzed by abnormal SENP1 is associated with cancers and transcription factor activity. In spite of the significant role of SENP1, the molecular basis of its desumoylation remains unclear. Here, MD simulations and QM/MM methods are combined to investigate the catalytic mechanism of desumoylation. The results showed that substrate SUMO1-RanGAP1 fitted into the catalytic pocket of SENP1 by the break of internal hydrophobic interactions and the isomerization of isopeptide from trans to cis. After that, the nucleophilic sulfur anion of Cys603 in SENP1 attacked the carbonyl carbon of Gly97 of SUMO1 to trigger the reaction, and then a tetrahedral intermediate and an acyl-enzyme intermediate were generated in turn, leading to the final release of enzyme SENP1 and two products, free SUMO1 and RanGAP1. In the process, nucleophilic attack was identified as the rate-determining step with a potential energy barrier of 20.2 kcal/mol. These results are in agreement with experimental data from mutagenesis and other experiments. Our findings elucidate the catalytic mechanism of SENP1 with its substrate and may provide a better understanding of SENP desumoylation. In particular, we have identified key residues in SENP1 needed for desumoylation that might be beneficial for the design of novel inhibitors of SENP1-related diseases.

NDRG1 is down-regulated in the early apoptotic event induced by camptothecin analogs: the potential role in proteolytic activation of PKC delta and apoptosis.

We previously reported that NSC606985, a new camptothecin analog, induces apoptosis of acute myeloid leukemic cells, which is triggered by proteolytic activation of protein kinase C delta (PKC delta). Here, we performed quantitative proteomic analysis of NSC606985-treated and untreated leukemic U937 cells with two-dimensional fluorescence difference gel electrophoresis (2-D DIGE) in combination with matrix-assisted laser desorption/ionization time-of-flight/time-of-flight tandem mass spectrometry. Thirty-three proteins were found to be deregulated. Then, we focused on N-myc downstream regulated gene 1 (NDRG1) down-regulated during apoptosis induction. The results demonstrated that the down-regulation of NDRG1 protein but not its mRNA was an early event prior to proteolytic activation of PKC delta in U937 cells under treatments of NSC606985 as well as other camptothecin analogs. With the ectopic expression of NDRG1, the proteolytic activation of PKC delta in NSC606985-treated leukemic cells was delayed and the cells were less sensitive to apoptosis. On the contrary, the suppression of NDRG1 expression by specific small interfering RNA significantly enhanced NSC606985-induced activation of PKC delta and apoptosis of U937 cells. In summary, our study suggests that the down-regulation of NDRG1 is involved in proteolytic activation of PKC delta during apoptosis induction, which would shed new light on the understanding the apoptotic process initiated by camptothecin.

Proteomics-based identification of two novel direct targets of hypoxia-inducible factor-1 and their potential roles in migration/invasion of cancer cells.

Hypoxia-inducible factor-1 (HIF-1), consisting of oxygen-sensitive HIF-1alpha and constitutively expressed HIF-1beta subunits, is a master transcriptional activator for cellular response to hypoxia. To explore direct HIF-1 targets, here we used differential gel electrophoresis (DIGE) to compare the HIF-1-regulated proteins between leukemic U937T-cell line with and without conditional induction of HIF-1alpha protein by tetracycline-off system. Among the upregulated proteins identified, mRNA levels of annexin A1, macrophage-capping protein (CapG), S100 calcium-binding protein A4 (S100A4), S100A11, acyl-CoA-binding protein and calcyclin-binding protein also increased. The expressions of the annexin A1, CapG and S100A4 genes were significantly induced by hypoxia in five adherent cell lines tested besides U937 cells, while their expressions were blocked by the short hairpin RNA specifically against HIF-1alpha. Further luciferase reporter assay and chromatin immunoprecipitation showed that HIF-1alpha directly bound to three hypoxia-responsive elements located at intron 1 of S100A4 gene and hypoxia-responsive element at -350 to -346 of CapG gene, which are essential for HIF-1-induced expression. Additionally, the role of S100A4 expression in migration and invasion of cancer cells were also confirmed. These findings would provide new sights for understanding the molecular mechanisms underlying HIF-1 action.

Polymer Template Synthesis of Soft, Light, and Robust Oxide Ceramic Films.

Oxide ceramic materials underpin a wide variety of technologies. However, the inherent fragility of these materials limits their use in emerging fields like wearable electronics and soft energy storage devices. Here, we develop a sol-gel electrospinning technique followed by calcination to create a range of oxide ceramic nanofiber films that exhibit significant softness without fragility after various deformations. This approach causes the ceramic crystals to fuse together at a low temperature during their growth within the polymer nanofiber templates. All the synthesized ceramic films, from SiO2 to BaTiO3, Li0.33La0.56TiO3, and Li7La3Zr2O12, have silk-like softness of <31 mN, low density of <0.36 g/cm3 and robust fire resistance to 1,000°C. Fabricated separators based on these films display large electrolyte uptakes of >900% and high thermal insulation performance, enhancing the rate capability and safety of lithium batteries. The reported method allows scalable synthesis of soft oxide ceramic films with properties appealing for applications.

Different responses of multifaceted plant diversities of alpine meadow and alpine steppe to nitrogen addition gradients on Qinghai-Tibetan Plateau.

Qinghai-Tibetan Plateau (QTP), >4000 m known as the "third pole of the earth" and is highly sensitive to nitrogen (N) deposition, understanding the effects of N deposition on multifaceted plant diversity (taxonomy diversity, functional diversity and phylogenetic diversity) in the alpine grasslands of Qinghai-Tibet Plateau are vital for the conservation of alpine plant diversity and the sustainability of alpine grasslands ecosystem services. We added N of different gradients to test the effects of soil acidification, soil eutrophication, and phosphorus limitation independently, and interactively on the multifaceted plant richness and evenness in both an alpine meadow and an alpine steppe of the QTP. We found that all the p-value of taxonomy diversity, functional diversity and phylogenetic diversity were >0.05 and values of R2 of fixed factors by nitrogen addition gradients was low (<0.10). In contrast to the alpine steppe, diversity of alpine meadow is more sensitive to soil factors than alpine steppe. Soil acidification caused by nitrogen deposition changed taxonomic evenness (p < 0.05), while eutrophication associated with nitrogen deposition altered taxonomic richness and phylogenetic evenness (p < 0.05) in the alpine meadow and functional richness (p < 0.05) in the alpine steppe. These findings suggest that the effects of N deposition on the multifaceted plant diversity (taxonomic, functional and phylogenetic diversity) varied with N deposition gradients and ecosystem types. Rational adaptation and mitigation techniques should be considered for different types of alpine grasslands on the QTP according to their different responses to the nitrogen deposition gradients in the future.

Effects of simulated N deposition on photosynthesis and productivity of key plants from different functional groups of alpine meadow on Qinghai-Tibetan plateau.

Nitrogen (N) deposition may alter physiological process of plants in grassland ecosystem. However, little is known about the response mechanism of individual plants in alpine regions to N deposition. We conducted a field experiment, and three treatments including 0 kg Nha-1year-1 (CK), 8 kgNha-1year-1 (Low N), and 72 kg N ha-1 year-1 (High N) were established to simulate N deposition in alpine meadow of Qinghai-Tibetan plateau. Our objectives were to determine the influence of N deposition on photosynthesis of different functional types of herbage species in alpine meadow, and finally characterize the links of plant productivity and photosynthesis with soil nutrients. The results showed that responses of alpine plants were species-specific under N deposition. Compared with grass species Agropyron cristatum and forb species Thalictrum aquilegifolium, the sedge species Carex melanantha was much more sensitive to N deposition; a lower N load (8 kgNha-1year-1) can cause a negative effect on its photosynthesis and productivity. Additionally, N deposition can promote plant N uptake and significantly decreased the C (carbon)/N (nitrogen) ratio. Compared with CK and low N deposition, high N deposition inhibited the photosynthesis and growth of the forb species Thalictrum aquilegifolium and sedge species Carex melanantha. In all three functional types of herbage species, the grass species A. cristatum tended to show a much higher photosynthetic capacity and better growth potential; thus, suggesting that grass species A. cristatum will be a more adaptative alpine plants under N deposition. Our findings suggested that plant photosynthetic responses to N deposition were species-specific, low N deposition was not beneficial for all the herbage species, and N deposition may change plant composition by the differential photosynthetic responses among species in alpine grassland. Plant composition shift to grass-dorminant in alpine regions might be attributed to a much higher photosynthetic potential and N use efficiency of grass species.

Are land use and short time climate change effective on soil carbon compositions and their relationships with soil properties in alpine grassland ecosystems on Qinghai-Tibetan Plateau?

Fencing and grass plantation are two key interventions to preserve the degraded grassland on the Qinghai-Tibetan Plateau (QTP). Climate warming and N deposition have substantially affected the alpine grassland ecosystems. However, molecular composition of soil organic carbon (SOC), the indicator of degradation of SOC, and its responses to climate change are still largely unclear. In this study, we conducted the experiments in three types of land use on the QTP: alpine meadow (AM), alpine steppe (AS), and cultivated grassland (CG) under 2°C climatic warming, 5 levels of nitrogen deposition rates at 8, 24, 40, 56, and 72kg N ha-1year-1, as well as a combination of climatic warming and N deposition (8kg N ha-1year-1). Our findings indicate that all three types of land use were dominated by O-alkyl carbon. The alkyl/O-alkyl ratio, aromaticity and hydrophobicity index of the CG were larger than those of the AM and AS, and this difference was generally stable under different treatments. Most of the SOC in the alpine grasslands was derived from fresh plants, and the carbon in the CG was more stable than that in the AM and AS. The compositions of all the alpine ecosystems were stable under short-term climatic changes, suggesting the short-term climate warming and nitrogen deposition likely did not affect the molecular composition of the SOC in the restored grasslands.

Regulation of Hypertension for Secondary Prevention of Stroke: The Possible 'Bridging Function' of Acupuncture.

Worldwide, stroke is the leading cause of mortality and disability, with hypertension being an independent risk factor for a secondary stroke. Acupuncture for the treatment of hypertension gains more attention in alternative and complementary medicine, but the results are inconsistent. Few studies regarding the secondary prevention of stroke by managing hypertension with acupuncture have been carried out as there are some problems regarding the antihypertensive drug status in the secondary prevention of stroke. Still, the potential of acupuncture in regulating the blood pressure for secondary stroke prevention deserves our focus. This review is based on papers recorded in the PubMed, Embase, and Web of Science databases, from their inception until March 28, 2017, and retrieved with the following search terms: hypertension and acupuncture, limited in spontaneously hypertensive rats (SHRs), stress-induced (or cold-induced) hypertensive or pre-hypertensive models. We find that, in these hypertensive animals, acupuncture could mainly influence factors related to the nervous system, oxidative stress, the endocrine system, cardiovascular function, and hemorheology, which are closely associated with the stroke outcome. This trend may give us a hint that acupuncture might well participate in the secondary prevention of stroke through these pathways when used in the management of hypertension.

Effects of warming and nitrogen deposition on CH4, CO2 and N2O emissions in alpine grassland ecosystems of the Qinghai-Tibetan Plateau.

Increases in nitrogen (N) deposition along with climate warming can change the dynamics of carbon and nitrogen in the soil, and alter greenhouse gases (GHGs) fluxes. To examine how N deposition and warming affect GHGs (CH4, CO2 and N2O) fluxes in alpine grasslands, we conducted experiments in an alpine meadow (AM), alpine-steppe (AS), and alpine cultivated grassland (CG) on the Qinghai-Tibetan Plateau (QTP). We simulated N deposition by treating soil with ammonium nitrate (NH4NO3) (8kgNha-1year-1), a warming treatment using an open top chamber (OTC) was carried out, and a combined treatment of warming and N deposition (8kgNha-1year-1) was conducted. The GHGs were collected during early, peak, and late plant growing seasons, i.e., May, August, and October of 2015, respectively, using a static chamber. We found, in general, neither N deposition nor warming solely altered CH4 and N2O fluxes in the alpine grasslands. The N deposition under warming conditions reduced CO2 emission significantly. The reduction of CO2 emission was most significant in the alpine steppe. The effects of climatic warming and N deposition on the GHGs varied greatly across the grassland types and the growing seasons. The cultivated grasslands were much more unstable than the native grasslands in CH4 uptake. In can be concluded the N deposition associated with human activities may buffer the CO2 emission in the alpine grassland ecosystems in terms of climate changes on the QTP.

Identification and characterization of histone lysine methylation modifiers in Fragaria vesca.

The diploid woodland strawberry (Fragaria vesca) is an important model for fruit crops because of several unique characteristics including the small genome size, an ethylene-independent fruit ripening process, and fruit flesh derived from receptacle tissues rather than the ovary wall which is more typical of fruiting plants. Histone methylation is an important factor in gene regulation in higher plants but little is known about its roles in fruit development. We have identified 45 SET methyltransferase, 22 JmjC demethylase and 4 LSD demethylase genes in F. vesca. The analysis of these histone modifiers in eight plant species supports the clustering of those genes into major classes consistent with their functions. We also provide evidence that whole genome duplication and dispersed duplications via retrotransposons may have played pivotal roles in the expansion of histone modifier genes in F. vesca. Furthermore, transcriptome data demonstrated that expression of some SET genes increase as the fruit develops and peaks at the turning stage. Meanwhile, we have observed that expression of those SET genes responds to cold and heat stresses. Our results indicate that regulation of histone methylation may play a critical role in fruit development as well as responses to abiotic stresses in strawberry.

Novel two-step method to form silk fibroin fibrous hydrogel.

Hydrogels prepared by silk fibroin solution have been studied. However, mimicking the nanofibrous structures of extracellular matrix for fabricating biomaterials remains a challenge. Here, a novel two-step method was applied to prepare fibrous hydrogels using regenerated silk fibroin solution containing nanofibrils in a range of tens to hundreds of nanometers. When the gelation process of silk solution occurred, it showed a top-down type gel within 30min. After gelation, silk fibroin fibrous hydrogels exhibited nanofiber network morphology with ß-sheet structure. Moreover, the compressive stress and modulus of fibrous hydrogels were 31.9±2.6 and 2.8±0.8kPa, respectively, which was formed using 2.0wt.% concentration solutions. In addition, fibrous hydrogels supported BMSCs attachment and proliferation over 12days. This study provides important insight in the in vitro processing of silk fibroin into useful new materials.

The effects of co-administration of butter on the absorption, metabolism and excretion of catechins in rats after oral administration of tea polyphenols.

In Southwest China, tea polyphenols are usually utilized by way of butter tea. Tea polyphenols inhibit the absorption and biosynthesis of fatty acids in vivo, but the effects of butter on the pharmacokinetics of tea polyphenols have drawn less concern. A rapid UHPLC-MS/MS method was used to quantitatively determine the catechins in the plasma, feces and bile of rats after the oral administration of tea polyphenol or its combination with butter. In comparison with the single tea polyphenol treatment, the maximum plasma concentrations (Cmax) of the free EGCG, EGC, EC, GCG, GC and ECG significantly decreased after the co-administration of butter. The mean residence times (MRT) of the free EGCG, EGC, EC, GC and ECG were also significantly prolonged. When the plasma samples were treated with ß-glucuronidase and arylsulfatase, the pharmacokinetic parameters of the total catechins (free and conjugated forms) were not affected by the co-administration of butter. These results indicated that the total absorption of catechins was not affected by butter, but the metabolism of catechins had been changed. Furthermore, the fecal catechins were significantly increased by butter. The total fecal amount and excretion ratio of all catechins were increased highly. The biliary excretion of EGCG, EGC, EC, GCG and GC was significantly increased by the co-administration of butter. To sum up, the butter changed the metabolism of catechins in vivo by decreasing the plasma concentration of the free catechins but increasing the conjugated catechins.

[Application of image identification technology to the analysis system of gene chip and image processing by VB].

Because of the anomalous points distributed in the image, gene chip is hard to be distinguished effectively in fact. This article offers some arithmetic of image processing by VB such as increasing contrast, self-adapt thresholds, two-values and searching for spares and disperse templet which can distinguish all kinds of gene chip quickly, well and truly.

NDRG1 contributes to retinoic acid-induced differentiation of leukemic cells.

N-Myc downstream-regulated gene 1 (NDRG1) protein has been shown to be up-regulated during leukemic cell differentiation induced by some differentiation-inducing agents such as all-trans retinoic acid (ATRA). However, the potential role of up-regulated NDRG1 in the event is greatly unknown. In this work, we show that inducible NDRG1 expression can drive leukemic U937 cells to undergo differentiation, while the knock-down of NDRG1 expression by specific small interfering RNA significantly antagonizes ATRA-induced differentiation of leukemic cells, proposing the role of NDRG1 in leukemic cell differentiation. Furthermore, our work shows that CCAAT/enhancer-binding protein beta (C/EBPbeta) and PU.1, which are important hematopoiesis-related transcription factors, may act as downstream effectors of NDRG1 in leukemic cell differentiation. Taking together, this study provides direct evidence for the role of NDRG1 protein in myeloid leukemic cell differentiation.