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1.
J Pediatr Hematol Oncol ; 45(7): e867-e872, 2023 10 01.
Artículo en Inglés | MEDLINE | ID: mdl-37526363

RESUMEN

B-cell acute lymphoblastic leukemia is the most common type of leukemia found in children. Timely diagnosis, white blood cell count, age of onset, and sex are considered the most important prognostic factors in childhood leukemia. Hematological and biochemical profiles are crucially important to infer the health of leukemia patient pre-chemotherapy and post-chemotherapy treatment. In the current study 200 cases were taken and evaluated for hematological (complete blood count and white blood differential count) and biochemical parameters (renal function tests, liver function tests, serum electrolytes and serum proteins) by comparison with normal reference values. Most of the cases were male under 5 years of age. Hematology parameters including red blood cells, hemoglobin and platelet levels were relatively low whereas white blood cells level was high in cases as compared with normal reference value. Sex-wise and age-wise comparison of biochemical profile showed significant difference among B-cell acute lymphoblastic leukemia cases whereas hematological profile did not show any visible difference.


Asunto(s)
Hematología , Leucemia , Leucemia-Linfoma Linfoblástico de Células Precursoras B , Humanos , Niño , Masculino , Femenino , Pronóstico , Leucemia-Linfoma Linfoblástico de Células Precursoras B/tratamiento farmacológico , Leucemia-Linfoma Linfoblástico de Células Precursoras B/metabolismo
2.
BMC Pediatr ; 23(1): 67, 2023 02 09.
Artículo en Inglés | MEDLINE | ID: mdl-36759823

RESUMEN

BACKGROUND: With prevalence up to 4%, Ventricular Septal Defect (VSD) is one of the leading causes of neonatal deaths. VSD is a common complex genetic disorder that has been associated with many genetic determinants. Variants from genes for the transcription factors including T-Box TBX5 and NFATc1 (nuclear factor of activated T cells, cytoplasmic 1), Vascular endothelial growth factor (VEGF), ISLET1 (encoded by the ISL1 gene) and enzyme MTHFR, a methylene tetrahydrofolate reductase were selected. Genetic risk score (GRS) is a widely accepted approach used to convert the genetic data into prediction and assessment tool for disease susceptibility. METHODS: A total of 200 participants were recruited for the current study, 100 VSD patients and 100 controls. Genotyping of the ISL1: rs1017, NFATc1: rs7240256, VEGF: rs36208048, TBX5: rs11067075, and MTHFR: rs1801133 variants was performed using tetra primer ARMS PCR and PCR-RFLP. For the statistical analysis, the software SPSS version 23 was used. Genotypic frequencies of cases and controls were calculated using chi-square (χ²) whereas allelic frequencies were calculated by using the SNPStats tool. The association of GRS quartiles with VSD was examined using binary logistic regression. Adjusted p-value 0.01 was used as significance threshold for all analyses. RESULTS: The ISL1 (OD: 0.242, CI: 0.158-0.37, p-value: 2.15 × 10- 4 :), NFATc1 (OD: 2.53, CI: 1.64-3.89, p-value: 2.11 × 10- 5), TBX5 (OD: 2.24, CI: 1.47-3.41, p-value:1.6 × 10- 4) and MTHFR (OD: 10.46, CI: 5.68-19.26, p-value: 2.09 × 10- 9:) variants were found to be in association with VSD. In contrast, the VEGF (OD: 0.952, CI: 0.56-1.62, p-value: 0.8921) variant did not show significance association with the VSD. For cases, the mean GRS score was 3.78 ± 1.285 while in controls it was 2.95 ± 1.290 (p-value: 0.479, CI: 0.474-1.190). Comparison of GRS between cases and control showed that mean GRS of cases was 1.90 ± 0.480 while in controls it was 1.68 ± 0.490 (p-value: 0.001, CI: 0.086-0.354). Higher quartiles were more prevalent in cases whereas lower quartiles were more prevalent in controls. CONCLUSION: GRS of these five loci was strongly associated with VSD. Moreover, genetic risk score can provide better information for the association between variants and disease as compared to a single SNP. We also illustrated that the cumulative power of GRS is greater over the single SNP effect. This is a pilot scale study with a relatively small sample size whose findings should be replicated in a larger sample size for the unique local Pakistani population.


Asunto(s)
Defectos del Tabique Interventricular , Factor A de Crecimiento Endotelial Vascular , Recién Nacido , Femenino , Humanos , Factor A de Crecimiento Endotelial Vascular/genética , Pakistán , Proyectos Piloto , Defectos del Tabique Interventricular/genética , Genotipo , Factores de Transcripción/genética , Estudios de Casos y Controles
3.
Lett Appl Microbiol ; 76(8)2023 Aug 02.
Artículo en Inglés | MEDLINE | ID: mdl-37463795

RESUMEN

Due to the rise in bacterial resistance towards various therapeutic agents, interest is now developing towards fatty acid based antimicrobials because of their non-specific mode of action. A strain SORS 24 isolated from Sonchus oleraceus (Sow thistle) showed significant activity against Escherichia coli ATCC 25922 (25 mm), Chlorella vulgaris (20 mm), Bacillus subtilis DSM 10 (ATCC 6051) and Pseudomonas sp. (15 mm). It displayed an LC50 value of 10 µg/ml against Artemia salina (Brine shrimp) nauplii and an EC50 value of 0.8 µg/ml in the (DPPH) diphenylpicrylhydrazyl antioxidant assay. The strain also displayed genotoxicity against a PolA deficient strain, E. coli K-12 AB 3027 (15 mm). Mass spectrometry (HPLC-MS) showed that the strain produced oleamide (9-Octadecenamide) and erucamide (13-Docosenamide). Both of the purified fatty acid amides showed prominent activity against B. subtilis DSM 10 (ATCC 6051) (20 mm) and E. coli ATCC 25922 (15 mm). Significant genotoxicity was observed against E. coli K-12 AB 3027 (15 mm). The 16S gene sequencing revealed that the strain belonged to species, Streptomyces tanashiensis. As far as our understanding, this is the first report of this species producing these fatty acid based antimicrobials.


Asunto(s)
Antiinfecciosos , Chlorella vulgaris , Sonchus , Streptomyces , Sonchus/química , Sonchus/genética , Sonchus/microbiología , Ácidos Grasos , Endófitos/genética , Chlorella vulgaris/genética , Escherichia coli/genética , Antiinfecciosos/farmacología , Streptomyces/genética , Filogenia , ARN Ribosómico 16S/genética
4.
Curr Issues Mol Biol ; 44(1): 152-175, 2021 Dec 29.
Artículo en Inglés | MEDLINE | ID: mdl-35723391

RESUMEN

The number of patients with neurodegenerative diseases, particularly Alzheimer's disease (AD), continues to grow yearly. Cholinesterase inhibitors (ChEIs) represent the first-line symptomatic drug treatment for mild-to-moderate AD; however, there is an unmet need to produce ChEIs with improved efficacy and reduced side effects. Herein, phytochemicals with reported anti-acetylcholinesterase (AChE) activity were ranked in silico for their anti-AChE potential. Ligands with a similar or higher binding affinity to AChE than galantamine were then selected for the design of novel dual-binding site heterodimeric drugs. In silico molecular docking of heterodimers with the target enzymes, AChE and butyrylcholinesterase (BuChE), were performed, and anti-cholinesterase binding affinities were compared with donepezil. Drug-likeliness properties and toxicity of the heterodimers were assessed using the SwissADME and ProTox-II webservers. Nine phytochemicals displayed similar or higher binding affinities to AChE than galantamine: sanguinarine > huperzine A > chelerythrine > yohimbine > berberine > berberastine > naringenin > akuammicine > carvone. Eleven heterodimeric ligands were designed with phytochemicals separated by four- or five-carbon alkyl-linkers. All heterodimers were theoretically potent AChE and BuChE dual-binding site inhibitors, with the highest affinity achieved with huperzine-4C-naringenin, which displayed 34% and 26% improved affinity to AChE and BuChE, respectively, then the potent ChEI drug, donepezil. Computational pharmacokinetic and pharmacodynamic screening suggested that phytochemical heterodimers would display useful gastrointestinal absorption and with relatively low predicted toxicity. Collectively, the present study suggests that phytochemicals could be garnered for the provision of novel ChEIs with enhanced drug efficacy and low toxicity.

5.
Arch Microbiol ; 203(8): 4901-4912, 2021 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-34250573

RESUMEN

Deleterious effects of artificially applied chemicals have highlighted the significance of biocontrol agents as suitable substitute for sustainable agriculture. In present study, three endophytic bacterial strains SV7, SV10 and LV19 showed extensive range of antifungal as well as plant growth promoting activities signifying potential to accomplish the requirement. Phylogenetic analysis revealed 100% similarity of three strains with taxon Firmicute. However, there was division among these isolates on basis of subgroups as SV7 belonged to Exiguobacterium auranticum, SV10 belonged to Paenibacillus sp. and LV19 was best fit in subgroup Priestia koreensis. All strains showed antifungal activity against Fusarium oxysporum on three different media (PDA, NA, LA) with maximum activity (53%) of LV19 strain on NA and least activity (13%) on PDA medium as recorded by zones of inhibition. In growth promotion experiments, combination of LV19 with Fusarium significantly suppressed chances of Fusarium wilt which is commonly caused by Fusarium oxysporum in sunflower plants. Diverse growth parameters (seed germination percentage, lengths and fresh weights of root and shoot) were significantly increased from 34 to 909% over pathogen infected plants only which was further proved by their root colonization analysis. Based on most efficient growth promotion by LV19 strain, expression of five plant defense related genes (SOD, PAL, NPR1, PR5, Chitinase) was evaluated revealing enhanced expression by 1.7-270-folds in consortium of LV19 and Fusarium. Thus, current study provided a scientific justification that bacterial strains in specific LV19 (Priestia koreensis) could be further developed as biocontrol agent with potential of plant growth promotion.


Asunto(s)
Fusarium , Helianthus , Paenibacillus , Filogenia , Enfermedades de las Plantas/prevención & control , Raíces de Plantas
6.
Biochem Genet ; 58(5): 821, 2020 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-32661952

RESUMEN

The authors regret that the reference provided to Fig. 1 of their publication was incorrect in the original publication. The authors obtained permission to reprint Fig. 1 retrospectively. The correct reference is: Nat Rev Genet. 2005 Mar;6(3):221-34. https://doi.org/10.1038/nrg1556 .

7.
Pak J Pharm Sci ; 33(1(Supplementary)): 379-383, 2020 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-32122871

RESUMEN

Cancers are caused by the defects in apoptosis process which leads to uncontrolled proliferation, therefore, most attractive drug target discovery strategy is to find ligands which have the ability to activate or regulate the apoptotic machinery. Peroxisome-proliferator-activated receptors (PPARs) are nuclear hormone receptors their over expression is observed in many tumours and contributes to chemotherapy resistance. The goal of this study to scrutinized antitumor phytochemicals from Alysicarpus bupleurifolius, Piper nigrum and Plumeria obtuse and potential energy values render from interactions between active site residues and ligands. The potential phytochemicals with significant binding affinity are ursolic acid, cis-4-decenoic acid and p-coumaric acid respectively most effective compounds in high throughput virtual screening belongs to Plumeria obtuse against PPARs associated with tumour development and progression. This modern drug designing modeling in silico approach, therefore, identifies the potential leads against over expressed tumours.


Asunto(s)
Antineoplásicos Fitogénicos/aislamiento & purificación , Evaluación Preclínica de Medicamentos/métodos , Receptores Activados del Proliferador del Peroxisoma/antagonistas & inhibidores , Fitoquímicos/aislamiento & purificación , Antineoplásicos Fitogénicos/metabolismo , Antineoplásicos Fitogénicos/farmacología , Simulación del Acoplamiento Molecular/métodos , Receptores Activados del Proliferador del Peroxisoma/química , Receptores Activados del Proliferador del Peroxisoma/metabolismo , Fitoquímicos/metabolismo , Fitoquímicos/farmacología , Unión Proteica/fisiología , Estructura Secundaria de Proteína , Estructura Terciaria de Proteína
8.
Lipids Health Dis ; 17(1): 155, 2018 Jul 18.
Artículo en Inglés | MEDLINE | ID: mdl-30021629

RESUMEN

BACKGROUND: Obesity is a complex disorder, the development of which is modulated by a multitude of environmental, behavioral and genetic factors. The common forms of obesity are polygenic in nature which means that many variants in the same or different genes act synergistically and affect the body weight quantitatively. The aim of the current study was to use information from many common variants previously identified to affect body weight to construct a gene score and observe whether it improves the associations observed. The SNPs selected were G2548A in leptin (LEP) gene, Gln223Arg in leptin receptor (LEPR) gene, Ala54Thr in fatty acid binding protein 2 (FABP2) gene, rs1121980 in fat mass and obesity associated (FTO) gene, rs3923113 in Growth Factor Receptor Bound Protein 14 (GRB14), rs16861329 in Beta-galactoside alpha-2,6-sialyltransferase 1 (ST6GAL1), rs1802295 in Vacuolar protein sorting-associated protein 26A (VPS26A), rs7178572 in high mobility group 20A (HMG20A), rs2028299 in adaptor-related protein complex 3 (AP3S2), and rs4812829 in Hepatocyte Nuclear Factor 4 Alpha (HNF4A). METHODS: A total of 475 subjects were genotyped for the selected SNPs in different genes using different genotyping techniques. The study subjects' age, weight, height, BMI, waist and hip circumference, serum total cholesterol, triglycerides, LDL and HDL were measured. A summation term, genetic risk score (GRS), was calculated using SPSS. RESULTS: The results showed a significantly higher mean gene score in obese cases than in non-obese controls (9.1 ± 2.26 vs 8.35 ± 2.07, p = 2 × 10- 4). Among the traits tested for association, gene score appeared to significantly affect BMI, waist circumference, and all lipid traits. CONCLUSION: In conclusion, the use of gene score is a better way to calculate the overall genetic risk from common variants rather than individual risk variants.


Asunto(s)
Regulación de la Expresión Génica , Predisposición Genética a la Enfermedad , Herencia Multifactorial , Obesidad/genética , Polimorfismo de Nucleótido Simple , Proyectos de Investigación , Complejo 3 de Proteína Adaptadora/sangre , Complejo 3 de Proteína Adaptadora/genética , Proteínas Adaptadoras Transductoras de Señales/sangre , Proteínas Adaptadoras Transductoras de Señales/genética , Adulto , Dioxigenasa FTO Dependiente de Alfa-Cetoglutarato/sangre , Dioxigenasa FTO Dependiente de Alfa-Cetoglutarato/genética , Antígenos CD/sangre , Antígenos CD/genética , Estatura , Peso Corporal , Estudios de Casos y Controles , Proteínas de Unión a Ácidos Grasos/sangre , Proteínas de Unión a Ácidos Grasos/genética , Femenino , Factor Nuclear 4 del Hepatocito/sangre , Factor Nuclear 4 del Hepatocito/genética , Proteínas del Grupo de Alta Movilidad/sangre , Proteínas del Grupo de Alta Movilidad/genética , Humanos , Leptina/sangre , Leptina/genética , Lipoproteínas HDL/sangre , Lipoproteínas LDL/sangre , Masculino , Persona de Mediana Edad , Obesidad/sangre , Obesidad/diagnóstico , Obesidad/patología , Receptores de Leptina/sangre , Receptores de Leptina/genética , Riesgo , Sialiltransferasas/sangre , Sialiltransferasas/genética , Triglicéridos/sangre , Proteínas de Transporte Vesicular/sangre , Proteínas de Transporte Vesicular/genética , Circunferencia de la Cintura
9.
Hemoglobin ; 42(5-6): 320-325, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-30700180

RESUMEN

Compromised quality of life (QoL) has been reported in individuals suffering from ß-thalassemia major (ß-TM) in Pakistan. However, insufficient data of its associated psychosocial, physical and other disease-related determinants is available. In an observational analytical study, 200 subjects aged between 5-25 years, were examined using a transfusion-dependent QoL (TranQoL) questionnaire. Clinical records and other related data were also gathered from transfusion center databases. The TranQoL mean score was 48.33 ± 5.6, ranging from 53.86 ± 13.6 for family functioning and support domain to 39.70 ± 18.4 for school and career functioning domain. Age, income, education, pre transfusion hemoglobin (Hb), serum ferritin level, pain, death due to ß-thal, monetary issues and pain were significantly associated with TranQoL scores. It was not only the clinical conditions but life alterations, social relationship and psychological events also loomed in improvement of treatment outcomes. Therefore, a tetra-cone of patient, school representatives, family and physicians are needed for better patient prospective.


Asunto(s)
Calidad de Vida , Talasemia beta/psicología , Adolescente , Transfusión Sanguínea , Cuidadores , Niño , Preescolar , Humanos , Acontecimientos que Cambian la Vida , Pakistán , Grupos de Autoayuda , Encuestas y Cuestionarios , Adulto Joven , Talasemia beta/terapia
10.
Lipids Health Dis ; 15: 29, 2016 Feb 16.
Artículo en Inglés | MEDLINE | ID: mdl-26878843

RESUMEN

BACKGROUND: The FTO gene has recently become one of the most extensively investigated genes associated with body mass and has been shown to play a role in cardiovascular diseases as well. The aim of the current study was to investigate the effect of a common variant of FTO gene, rs9939609 in obese and coronary heart disease (CHD) patients of Pakistan and investigate whether it has any influence on the serum biochemical parameters. METHODS: A total of 970 samples (295 obese, 425 CHD and 250 controls) were genotyped using TaqMan allelic discrimination assay. Serum total cholesterol, HDL-C and triglycerides were measured using spectrophotometric methods. LDL-C was calculated by Friedwalds equation. Statistical analysis was done by SPSS version 22. RESULTS: Results showed moderately high minor allele frequency (MAF) in obese and CHD cases as compared to controls (obese = 0.381 CAD = 0.361 and controls = 0.286). The variant was significantly associated with obesity and CAD (obesity odds ratio (OR) = 1.54, confidence interval (CI) = 1.07-2.21, p = 0.0009; CHD OR = 1.43, CI = 1.02-2.01, p = 0.004) in Pakistan. The risk allele did not show a significant association with any of the lipid trait tested (p > 0.05) but a strong association was observed with plasma glucose levels (obese p = 0.001, CAD p = 0.014, controls p = 0.019). CONCLUSION: In conclusion, the variant was associated with obesity and CAD in the studied subjects and its possible effect may involve the blood sugar metabolism but not serum lipid chemistry.


Asunto(s)
Dioxigenasa FTO Dependiente de Alfa-Cetoglutarato/genética , Enfermedad de la Arteria Coronaria/genética , Obesidad/etiología , Adulto , Anciano , Estudios de Casos y Controles , HDL-Colesterol/sangre , LDL-Colesterol/sangre , Enfermedad de la Arteria Coronaria/sangre , Femenino , Predisposición Genética a la Enfermedad/genética , Humanos , Masculino , Persona de Mediana Edad , Obesidad/sangre , Pakistán , Polimorfismo de Nucleótido Simple/genética , Triglicéridos/sangre
11.
Biol Res ; 49: 23, 2016 Apr 13.
Artículo en Inglés | MEDLINE | ID: mdl-27075752

RESUMEN

BACKGROUND: Obesity is a complex disorder and has been increasing globally at alarming rates including Pakistan. However, there is scarce research on understanding obesity genetics in Pakistan. Leptin is a hormone secreted by adipocytes in response to satiety and correlates with body weight. Any mutations in the LEP gene have an adverse effect on energy regulation pathway and lead to severe, early onset obesity. To date, only eight mutations have been described in the LEP gene of which p. N103K is one. METHODS: We aimed to analyze the prevalence of this mutation in Pakistani subjects. A total of 475 subjects were genotyped by PCR-RFLP analysis and their serum profiling was done. RESULTS: Results showed that this mutation was present only in one male child with early onset obesity (10 year). He had very low serum leptin levels suggestive of functional impact of the mutation. The prevalence of such mutations is, however, low due to the drastic effects on the energy regulation. CONCLUSION: In conclusion, LEP gene mutations contribute significantly to the monogenic forms of obesity and are important due to the availability of treatment options. Such mutations may exert their effect by directly affecting energy regulation pathway and are more prominent in the early stages of life only.


Asunto(s)
Leptina/genética , Mutación , Obesidad/genética , Adulto , Edad de Inicio , Antropometría , Estudios de Casos y Controles , Ensayo de Inmunoadsorción Enzimática , Femenino , Genotipo , Humanos , Leptina/sangre , Masculino , Persona de Mediana Edad , Obesidad/sangre , Pakistán , Reacción en Cadena de la Polimerasa , Polimorfismo de Longitud del Fragmento de Restricción , Índice de Severidad de la Enfermedad
12.
Biochem Genet ; 54(1): 1-28, 2016 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-26581848

RESUMEN

Obesity has been designated as a global epidemic by WHO as its prevalence has increased at an alarming rate in the last few decades worldwide. It is a risk factor for diabetes, hypertension, cardiovascular problems, etc. The contribution of genes to the development of obesity was confirmed in late twentieth century. The concept of monogenic obesity came with the identification of leptin, and mutations in its gene, followed by the discovery of more single gene mutations. However, the recent explosion of obesity could not be explained on the basis of these rare mutations and it was after the first genome-wide association study in 2007 that made possible the identification of different effect size variants in many candidate and non-candidate genes acting in a quantitative way to add to body weight. These studies laid down the basis for polygenic cause of common forms of obesity. The role of epigenetic regulation in the modulation of energy regulation pathway was another important explanation put forward in the latter half of the past decade. Taking into account the quantitative contribution of different variants has given the concept of obesity risk scoring in order to score individuals into different risk groups so as to decide for treatment options.


Asunto(s)
Obesidad/genética , Anorexia/fisiopatología , Índice de Masa Corporal , Predisposición Genética a la Enfermedad , Conductas Relacionadas con la Salud , Humanos , Estilo de Vida , Obesidad/fisiopatología , Relación Cintura-Cadera
13.
Biochem Genet ; 54(5): 676-84, 2016 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-27263109

RESUMEN

Coronary artery disease (CAD) is one of the leading public health problems associated with mortality and morbidity in the world. It is a complex disorder influenced by both genetic and environmental factors. Atherosclerosis and elevated levels of plasma cholesterol contribute to increased risk for CAD. Other risk factors include age, hypertension, obesity, diabetes, smoking, and family history. Previous genetic studies have identified multiple polymorphisms in various genes to be associated with the risk of CAD in different populations. We aimed to examine the association of MRAS/rs9818870 and C12orf43/rs2258287 polymorphisms with the risk of CAD in a Pakistani sample. A total of 200 samples (100 cases and 100 controls) was analyzed by Allele-specific PCR. Genotypes were determined by agarose gel electrophoresis. In the current study, locus C12orf43/rs2258287 was found to be associated with the risk of CAD in the studied Pakistani cohort (OR 0.18; CI 0.08-0.37; p = 0.0001) while no association was observed for MRAS/rs9818870 (OR 1.34; CI 0.65-2.76; p = 0.42). In conclusion, the rs2258287 SNP may play an important role in the progression of CAD in the Pakistani subjects. However, future studies should be done on a larger sample size to fully establish its exact role in CAD.


Asunto(s)
Enfermedad de la Arteria Coronaria/genética , Polimorfismo de Nucleótido Simple , Proteínas/genética , Adulto , Progresión de la Enfermedad , Femenino , Frecuencia de los Genes , Predisposición Genética a la Enfermedad , Humanos , Masculino , Persona de Mediana Edad , Pakistán , Proteínas ras/genética
14.
Chromatographia ; 79(21): 1527-1532, 2016.
Artículo en Inglés | MEDLINE | ID: mdl-27867207

RESUMEN

Bacillus subtilis strain BIA was used for the production of bioactive lipopeptides. Different extraction and purification methods were assayed as liquid-liquid extraction, and acid and ammonium sulfate precipitation followed by TLC, SPE, and gel filtration. Active fractions were further purified using RP-HPLC. The molecular mass of the purified product from HPLC was determined through Tris-Tricine SDS-PAGE and MALDI-TOF-MS. The results revealed that Bacillus subtilis strain BIA produced surfactin and iturin like compounds. Coproduction of surfactin and iturin like compounds by this strain is a remarkable trait for a potential biocontrol agent. This paper also includeds techniques that have been developed for the optimal and convenient extraction of bioactive lipopeptides from microbial origin.

15.
J Pak Med Assoc ; 66(10): 1258-1261, 2016 10.
Artículo en Inglés | MEDLINE | ID: mdl-27686299

RESUMEN

Objective: To find the bacterial and biochemical details of bags used in platelet transfusion. Methods: This cross-sectional study was carried out at a tertiary care hospital of Saudi Arabia (King Khalid Hospital, Najran) from January to June 2012, and comprised platelet bags. Samples for bacterial detection and biochemical testing of platelet bags were taken from blood bags on Day 6 of donation. Bacterial detection was done by using aerobic culture bottle, different gram stain, cultures and analytical profile index strips. Glucose, pH and protein measurements were done by Multistix dipstick method. SPSS 16 was used for data analysis. RESULTS: Of the 352 platelet bags, 1(0.28%) showed bacterial growth on Day 6 of collection. That bacterium was Staphylococcus epidermidis. Glucose content and pH of that platelet bag was 144.14mg/dl and 5, respectively. The overall mean pH of platelet bags was 6.69±0.55 (range: 3-7). Moreover, 255(72.4%) bags showed pH of 7, 90(25.5%) of 6, 5(1.4%) of 5 and 2(0.57%) showed pH of 3 on Day 6. The overall mean protein level was 6.162±0.204g/dl (range: 5.8-6.6). Pearson bivariate correlation between platelet bag's pH and glucose content was 0.707 (p=0.001). CONCLUSIONS: Positive correlation was found between platelet bag's glucose and pH levels.


Asunto(s)
Bacterias/aislamiento & purificación , Bancos de Sangre , Plaquetas , Centros de Atención Terciaria , Conservación de la Sangre , Estudios Transversales , Glucosa/análisis , Humanos , Concentración de Iones de Hidrógeno , Arabia Saudita
16.
J Basic Microbiol ; 55(9): 1064-74, 2015 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-25871833

RESUMEN

Indigenous Cr(VI) reducing bacterial strains Pseudomonas aeruginosa Rb-1 and Ochrobactrum intermedium Rb-2 were evaluated for EPS production under Cr(VI) challenged and free conditions. Strain Rb-2 was more efficient in total EPS production (13.63 mg g(-1)) than Rb-1 (4.15 mg g(-1)) under Cr(VI) stress. Thick covering of capsular material around the cells of both bacterial strains was detected by electron microscopy. Transmission electron micrographs showed the appearance of pilli like structures under chromium stress by two bacteria suggested the possible involvement of this in exchange of hereditary material to increase their chances of survival under stress conditions. FTIR study showed involvement of sulphonate and hydroxyl groups in the binding with Cr(VI) ions. Solid-state (13) C NMR spectra revealed that EPS produced by both strains exhibited structural similarity with the glucan. The partial psl gene sequences of Rb-1 and Rb-2 showed homology with psl gene of Pseudomonas aeruginosa PAO1 and capsular polysaccharide biosynthesis protein of various strains of Pseudomonas. This is the first report on the identification of psl gene from Ochrobacterum in NCBI GenBank database up to our knowledge.


Asunto(s)
Biopolímeros/biosíntesis , Cromo/metabolismo , Residuos Industriales , Ochrobactrum/metabolismo , Pseudomonas aeruginosa/metabolismo , Aguas Residuales/microbiología , Biopolímeros/metabolismo , Genes Bacterianos , Espectroscopía de Resonancia Magnética , Microscopía Electrónica de Rastreo , Microscopía Electrónica de Transmisión , Ochrobactrum/aislamiento & purificación , Pseudomonas aeruginosa/aislamiento & purificación , Espectroscopía Infrarroja por Transformada de Fourier , Aguas Residuales/química
17.
Pak J Pharm Sci ; 28(5): 1573-81, 2015 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-26408866

RESUMEN

Camellia sinensisis traditionally used in many polyherbal preparations for the treatment of different diseases and infections. Its action has been associated with its antioxidant activities. In this study, antioxidant effect of Camellia sinensis on hydrogen peroxide-induced human lymphocyte cell cultures was estimated. Camellia sinensis showed high contents of ascorbic acid, phenols, flavonoids, and flavonols. Good scavenging activity was evident by scavenging assays e.g. 2,2-DiPhenyl-2-Picrylhydrazyl Hydrate (DPPH), 2,2-Azinobis (3-ethyl-BenzoThiazoline-6-Sulfonic acid (ABTS) radical assay and reducing power assay. Moreover, High Performance Liquid Chromatography (HPLC-UV) chromatographs showed many notable peaks of unidentified bioactive compounds. In vitro antioxidant actions were determined by the activities of catalase (ELISA kit method), superoxide dismutase, lipid peroxidation and total protein contents on lymphocyte cell cultures. In vitro experimental trial showed strong antioxidant repair mechanism of plant against oxidative stress. Results of extraction with solvent methanol showed the highest antioxidant activity. Camellia sinensis is promising source of natural antioxidants and further studies might be a likely source of its use in remedy of different diseases.


Asunto(s)
Antioxidantes/farmacología , Camellia sinensis , Extractos Vegetales/farmacología , Camellia sinensis/química , Células Cultivadas , Cromatografía Líquida de Alta Presión , Linfocitos/efectos de los fármacos , Linfocitos/metabolismo
18.
Biotechnol Lett ; 36(4): 767-73, 2014 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-24375232

RESUMEN

Endophytic actinomycetes from five Asteraceae plants were isolated and evaluated for their bioactivities. From Parthenium hysterophorus, Ageratum conyzoides, Sonchus oleraceus, Sonchus asper and Hieracium canadense, 42, 45, 90, 3, and 2 isolates, respectively, were obtained. Of the isolates, 86 (47.2 %) showed antimicrobial activity. Majority of the isolates were recovered from the roots (n = 127, 69.7 %). The dominant genus was Streptomyces (n = 96, 52.7 %), while Amycolatopsis, Pseudonocardia, Nocardia and Micromonospora were also recovered. Overall, 36 of the 86 isolates were significantly bioactivity while 18 (20.9 %) showed strong bioactivity. In total, 52.1 and 66.6 % showed potent cytotoxicity and antioxidant activities. The LC50 for 15 strains was <20 µg/ml. Compared to the ascorbate standard (EC50 0.34 µg/ml), all isolates gave impressive results with notable EC50 values of 0.65, 0.67, 0.74 and 0.79 µg/ml.


Asunto(s)
Actinobacteria/aislamiento & purificación , Asteraceae/microbiología , Biotecnología/métodos , Endófitos/aislamiento & purificación , Actinobacteria/clasificación , Actinobacteria/fisiología , Antibiosis , Biodiversidad , Endófitos/clasificación , Endófitos/fisiología
19.
Pol J Microbiol ; 63(3): 261-6, 2014.
Artículo en Inglés | MEDLINE | ID: mdl-25546935

RESUMEN

Plant growth promoting rhizobacteria (PGPR) promote plant growth by various mechanisms such as phytohormone production, enhanced water and nutrient uptake, improved nitrogen availability in the soil, production of ACC-deaminase for ethylene breakdown, phosphate solubilization, siderophore production etc. Microbial auxin production is the major factor not only responsible for strengthening the plant-microbe relationship but it also promotes plant growth and development in a positive manner. Thus, bacterial auxin production potential can be exploited for plant growth improvement that may be effective in reducing the hazardous effects of chemical fertilizers on the ecosystem used to obtain higher yields. The present review gives a better understanding of various factors and mechanisms involved in auxin production by PGPR that may be helpful in proper exploitation of these natural resources in a beneficial way.


Asunto(s)
Ácidos Indolacéticos/farmacología , Desarrollo de la Planta/efectos de los fármacos , Plantas/microbiología , Rhizobium/fisiología
20.
Rev Biol Trop ; 62(3): 1251-60, 2014 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-25412549

RESUMEN

The genus Leptolyngbya comprises filamentous cyanobacteria that are important in rice fields. In the rhizosphere, cyanobacteria produce a variety of secondary metabolites such as auxins that are important in agriculture soil performance. To assess this, Leptolyngbya strain MMG-1, was isolated from the rhizosphere of rice plants and described. For this, the morphology of this strain was studied by light microscopy as well as by confocal laser scanning microscopy. Besides, the ability of this strain to synthesize an auxin-like bioactive com- pound was demonstrated under various culture conditions (different amounts of tryptophan; pH; different alter- nating light:dark periods; duration of the incubation). The auxin-like compound was extracted from the culture of Leptolyngbya strain MMG-1 and identified as indole-3-acetic acid (IAA) by thin layer chromatography (TLC) as well as by high performance liquid chromatography (HPLC). Our results showed that the strain required the precursor L-tryptophan for the synthesis of IAA. Leptolyngbya strain MMG-1 accumulated IAA intracellularly. The IAA secreted by Leptolyngbya strain MMG-1 was significantly correlated with the initial concentration of L-tryptophan in the medium, as well as with the duration of the incubation. The bioactivity of the secreted IAA was determined by its effect on the rooting pattern of Pisum sativum seedlings. The culture supernatant of Leptolyngbya strain MMG-1 stimulated the seedling lateral rooting, while it decreased root length. Hence, rhizospheric Leptolyngbya produced auxin under different conditions and affected the plants rooting pattern.


Asunto(s)
Cianobacterias/fisiología , Ácidos Indolacéticos/aislamiento & purificación , Oryza/microbiología , Cianobacterias/química , Cianobacterias/clasificación , Cianobacterias/aislamiento & purificación
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