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1.
Photosynth Res ; 2024 Jun 21.
Artículo en Inglés | MEDLINE | ID: mdl-38907135

RESUMEN

The ring-like peripheral light-harvesting complex 2 (LH2) expressed by many phototrophic purple bacteria is a popular model system in biological light-harvesting research due to its robustness, small size, and known crystal structure. Furthermore, the availability of structural variants with distinct electronic structures and optical properties has made this group of light harvesters an attractive testing ground for studies of structure-function relationships in biological systems. LH2 is one of several pigment-protein complexes for which a link between functionality and effects such as excitonic coherence and vibronic coupling has been proposed. While a direct connection has not yet been demonstrated, many such interactions are highly sensitive to resonance conditions, and a dependence of intra-complex dynamics on detailed electronic structure might be expected. To gauge the sensitivity of energy-level structure and relaxation dynamics to naturally occurring structural changes, we compare the photo-induced dynamics in two structurally distinct LH2 variants. Using polarization-controlled 2D electronic spectroscopy at cryogenic temperatures, we directly access information on dynamic and static disorder in the complexes. The simultaneous optimal spectral and temporal resolution of these experiments further allows us to characterize the ultrafast energy relaxation, including exciton transport within the complexes. Despite the variations in PPC molecular structure manifesting as clear differences in electronic structure and disorder, the energy-transport and-relaxation dynamics remain remarkably similar. This indicates that the light-harvesting functionality of purple bacteria within a single LH2 complex is highly robust to structural perturbations and likely does not rely on finely tuned electronic- or electron-vibrational resonance conditions.

2.
J Phys Chem A ; 128(19): 3830-3839, 2024 May 16.
Artículo en Inglés | MEDLINE | ID: mdl-38709806

RESUMEN

As important naturally occurring chromophores, photophysical/chemical properties of quinoid flavins have been extensively studied both experimentally and theoretically. However, little is known about the transition dipole moment (TDM) orientation of excited-state absorption transitions of these important compounds. This aspect is of high interest in the fields of photocatalysis and quantum control studies. In this work, we employ polarization-associated spectra (PAS) to study the excited-state absorption transitions and the underlying TDM directions of a standard quinoid flavin compound. As compared to transient absorption anisotropy (TAA), an analysis based on PAS not only avoids diverging signals but also retrieves the relative angle for ESA transitions with respect to known TDM directions. Quantum chemical calculations of excited-state properties lead to good agreement with TA signals measured in magic angle configuration. Only when comparing experiment and theory for TAA spectra and PAS, do we find deviations when and only when the S0 → S1 of flavin is used as a reference. We attribute this to the vibronic coupling of this transition to a dark state. This effect is only observed in the employed polarization-controlled spectroscopy and would have gone unnoticed in conventional TA.

3.
J Chem Phys ; 159(7)2023 Aug 21.
Artículo en Inglés | MEDLINE | ID: mdl-37581414

RESUMEN

We propose a novel UV/Vis femtosecond spectroscopic technique, two-dimensional fluorescence-excitation (2D-FLEX) spectroscopy, which combines spectral resolution during the excitation process with exclusive monitoring of the excited-state system dynamics at high time and frequency resolution. We discuss the experimental feasibility and realizability of 2D-FLEX, develop the necessary theoretical framework, and demonstrate the high information content of this technique by simulating the 2D-FLEX spectra of a model four-level system and the Fenna-Matthews-Olson antenna complex. We show that the evolution of 2D-FLEX spectra with population time directly monitors energy transfer dynamics and can thus yield direct qualitative insight into the investigated system. This makes 2D-FLEX a highly efficient instrument for real-time monitoring of photophysical processes in polyatomic molecules and molecular aggregates.

4.
J Chem Phys ; 158(14): 144201, 2023 Apr 14.
Artículo en Inglés | MEDLINE | ID: mdl-37061463

RESUMEN

We present a hollow-core fiber (HCF) based transient absorption experiment, with capabilities beyond common titanium:sapphire based setups. By spectral filtering of the HCF spectrum, we provide pump pulses centered at 425 nm with several hundred nJ of pulse energy at the sample position. By employing the red edge of the HCF output for seeding CaF2, we obtain smooth probing spectra in the range between 320 and 900 nm. We demonstrate the capabilities of our experiment by following the ultrafast relaxation dynamics of a radical cationic photocatalyst to prove its pre-association with an arene substrate, a phenomenon that was not detectable previously by steady-state spectroscopic techniques. The detected preassembly rationalizes the successful participation of radical ionic photocatalysts in single electron transfer reactions, a notion that has been subject to controversy in recent years.

5.
Angew Chem Int Ed Engl ; 62(29): e202304088, 2023 Jul 17.
Artículo en Inglés | MEDLINE | ID: mdl-37102264

RESUMEN

C60 donor dyads in which the carbon cage is covalently linked to an electron-donating unit have been discussed as one possibility for an electron-transfer system, and it has been shown that spherical [Ge9 ] cluster anions show a close relation to fullerenes with respect to their electronic structure. However, the optical properties of these clusters and of functionalized cluster derivatives are almost unknown. We now report on the synthesis of the intensely red [Ge9 ] cluster linked to an extended π-electron system. [Ge9 {Si(TMS)3 }2 {CH3 C=N}-DAB(II)Dipp ]- (1- ) is formed upon the reaction of [Ge9 {Si(TMS)3 }2 ]2- with bromo-diazaborole DAB(II)Dipp -Br in CH3 CN (TMS=trimethylsilyl; DAB(II)=1,3,2-diazaborole with an unsaturated backbone; Dipp=2,6-di-iso-propylphenyl). Reversible protonation of the imine entity in 1- yields the deep green, zwitterionic cluster [Ge9 {Si(TMS)3 }2 {CH3 C=N(H)}-DAB(II)Dipp ] (1-H) and vice versa. Optical spectroscopy combined with time-dependent density functional theory suggests a charge-transfer excitation between the cluster and the antibonding π* orbital of the imine moiety as the cause of the intense coloration. An absorption maximum of 1-H in the red region of the electromagnetic spectrum and the corresponding lowest-energy excited state at λ=669 nm make the compound an interesting starting point for further investigations targeting the design of photo-active cluster compounds.

6.
J Am Chem Soc ; 144(11): 4721-4726, 2022 03 23.
Artículo en Inglés | MEDLINE | ID: mdl-35259294

RESUMEN

Flavoenzymes mediate a multitude of chemical reactions and are catalytically active both in different oxidation states and in covalent adducts with reagents. The transfer of such reactivity to the organic laboratory using simplified molecular flavins is highly desirable, and such applications in (photo)oxidation reactions are already established. However, molecular flavins have not been used for the reduction of organic substrates yet, although this activity is known and well-studied for DNA photolyase enzymes. We report a catalytic method using reduced molecular flavins as photoreductants and γ-terpinene as a sacrificial reductant. Additionally, we present our design for air-stable, reduced flavin catalysts, which is based on a conformational bias strategy and circumvents the otherwise rapid reduction of O2 from air. Using our catalytic strategy, we were able to replace superstoichiometric amounts of the rare-earth reductant SmI2 in a 5-exo-trig cyclization of substituted barbituric acid derivatives. Such flavin-catalyzed reductions are anticipated to be beneficial for other transformations as well and their straightforward synthesis indicates future use in stereo- as well as site-selective transformations.


Asunto(s)
Desoxirribodipirimidina Fotoliasa , Flavinas , Electrones , Flavinas/metabolismo , Oxidación-Reducción , Sustancias Reductoras
7.
J Am Chem Soc ; 144(41): 18927-18937, 2022 10 19.
Artículo en Inglés | MEDLINE | ID: mdl-36205547

RESUMEN

In concert with carbonyl compounds, Lewis acids have been identified as a versatile class of photocatalysts. Thus far, research has focused on activation of the substrate, either by changing its photophysical properties or by modifying its photochemistry. In this work, we expand the established mode of action by demonstrating that UV photoexcitation of a Lewis acid-base complex can lead to homolytic cleavage of a covalent bond in the Lewis acid. In a study on the complex of benzaldehyde and the Lewis acid BCl3, we found evidence for homolytic B-Cl bond cleavage leading to formation of a borylated ketyl radical and a free chlorine atom only hundreds of femtoseconds after excitation. Both time-dependent density functional theory and transient absorption experiments identify a benzaldehyde-BCl2 cation as the dominant species formed on the nanosecond time scale. The experimentally validated B-Cl bond homolysis was synthetically exploited for a BCl3-mediated hydroalkylation reaction of aromatic aldehydes (19 examples, 42-76% yield). It was found that hydrocarbons undergo addition to the C═O double bond via a radical pathway. The photogenerated chlorine radical abstracts a hydrogen atom from the alkane, and the resulting carbon-centered radical either recombines with the borylated ketyl radical or adds to the ground-state aldehyde-BCl3 complex, releasing a chlorine atom. The existence of a radical chain was corroborated by quantum yield measurements and by theory. The photolytic mechanism described here is based on electron transfer between a bound chlorine and an aromatic π-system on the substrate. Thereby, it avoids the use of redox-active transition metals.


Asunto(s)
Benzaldehídos , Ácidos de Lewis , Cloro , Aldehídos , Cloruros , Carbono/química , Hidrógeno , Alcanos
8.
Phys Chem Chem Phys ; 24(44): 27212-27223, 2022 Nov 18.
Artículo en Inglés | MEDLINE | ID: mdl-36321567

RESUMEN

The ultrafast relaxation within the Q-bands of chlorophyll plays a crucial role in photosynthetic light-harvesting. Yet, despite being the focus of many experimental and theoretical studies, it is still not fully understood. In this paper we look at the relaxation process from the perspective of non-adiabatic wave packet dynamics. For this purpose, we identify vibrational degrees of freedom which contribute most to the non-adiabatic coupling. Using a selection of normal modes, we construct four reduced-dimensional coordinate spaces and investigate the wave packet dynamics on XMS-CASPT2 potential energy surfaces. In this context, we discuss the associated computational challenges, as many quantum chemical methods overestimate the Qx-Qy energy gap. Our results show that the Qx and Qy potential energy surfaces do not cross in an energetically accessible region of the vibrational space. Instead, non-adiabatic coupling facilitates ultrafast population transfer across the potential energy surface. Moreover, we can identify the excited vibrational eigenstates that take part in the relaxation process. We conclude that the Q-band system of chlorophyll a should be viewed as a strongly coupled system, where population is easily transferred between the x and y-polarized electronic states. This suggests that both orientations may contribute to the electron transfer in the reaction center of photosynthetic light-harvesting systems.


Asunto(s)
Clorofila , Vibración , Clorofila A , Fotosíntesis
9.
J Chem Phys ; 156(8): 084114, 2022 Feb 28.
Artículo en Inglés | MEDLINE | ID: mdl-35232180

RESUMEN

Correlated spectral fluctuations were suggested to coordinate excitation transport inside natural light harvesting complexes. We demonstrate the capacities of 2D line shapes from fifth-order coherent electronic signals (R5-2D) to report on such fluctuations in molecular aggregates and present a stochastic approach to fluctuations in correlated site and bi-exciton binding energies in the optical dynamics of Frenkel excitons. The model is applied to R5-2D line shapes of a homodimer, and we show that the peak tilt dynamics are a measure for site energy disorder, inter-site correlation, and the strength of bi-exciton binding energy fluctuations.

10.
Proc Natl Acad Sci U S A ; 116(10): 4064-4069, 2019 03 05.
Artículo en Inglés | MEDLINE | ID: mdl-30770446

RESUMEN

Single-molecule spectroscopy (SMS) provides a detailed view of individual emitter properties and local environments without having to resort to ensemble averaging. While the last several decades have seen substantial refinement of SMS techniques, recording excitation spectra of single emitters still poses a significant challenge. Here we address this problem by demonstrating simultaneous collection of fluorescence emission and excitation spectra using a compact common-path interferometer and broadband excitation, which is implemented as an extension of a standard SMS microscope. We demonstrate the technique by simultaneously collecting room-temperature excitation and emission spectra of individual terrylene diimide molecules and donor-acceptor dyads embedded in polystyrene. We analyze the resulting spectral parameters in terms of optical lineshape theory to obtain detailed information on the interactions of the emitters with their nanoscopic environment. This analysis finally reveals that environmental fluctuations between the donor and acceptor in the dyads are not correlated.

11.
J Chem Phys ; 154(4): 045102, 2021 Jan 28.
Artículo en Inglés | MEDLINE | ID: mdl-33514092

RESUMEN

Over the last several decades, the light-harvesting protein complexes of purple bacteria have been among the most popular model systems for energy transport in excitonic systems in the weak and intermediate intermolecular coupling regime. Despite this extensive body of scientific work, significant questions regarding the excitonic states and the photo-induced dynamics remain. Here, we address the low-temperature electronic structure and excitation dynamics in the light-harvesting complex 2 of Rhodopseudomonas acidophila by two-dimensional electronic spectroscopy. We find that, although at cryogenic temperature energy relaxation is very rapid, exciton mobility is limited over a significant range of excitation energies. This points to the presence of a sub-200 fs, spatially local energy-relaxation mechanism and suggests that local trapping might contribute substantially more in cryogenic experiments than under physiological conditions where the thermal energy is comparable to or larger than the static disorder.


Asunto(s)
Beijerinckiaceae/química , Complejos de Proteína Captadores de Luz/química , Teoría Cuántica , Electrones , Transferencia de Energía , Análisis Espectral , Temperatura
12.
Angew Chem Int Ed Engl ; 60(18): 10155-10163, 2021 Apr 26.
Artículo en Inglés | MEDLINE | ID: mdl-33595902

RESUMEN

Lewis acids have recently been recognized as catalysts enabling enantioselective photochemical transformations. Mechanistic studies on these systems are however rare, either due to their absorption at wavelengths shorter than 260 nm, or due to the limitations of theoretical dynamic studies for larger complexes. In this work, we overcome these challenges and employ sub-30-fs transient absorption in the UV, in combination with a highly accurate theoretical treatment on the XMS-CASPT2 level. We investigate 2-cyclohexenone and its complex to boron trifluoride and analyze the observed dynamics based on trajectory calculations including non-adiabatic coupling and intersystem crossing. This approach explains all ultrafast decay pathways observed in the complex. We show that the Lewis acid remains attached to the substrate in the triplet state, which in turn explains why chiral boron-based Lewis acids induce a high enantioselectivity in photocycloaddition reactions.

13.
J Chem Phys ; 152(8): 084201, 2020 Feb 28.
Artículo en Inglés | MEDLINE | ID: mdl-32113347

RESUMEN

The study and manipulation of low dipole moment quantum states have been challenging due to their inaccessibility by conventional spectroscopic techniques. Controlling the spin in such states requires unfeasible strong magnetic fields to overcome typical decoherence rates. However, the advent of terahertz technology and its application in magnetic pulses opens up a new scenario. In this article, we focus on an electron-hole pair model to demonstrate that it is possible to control the precession of the spins and to modify the transition rates to different spin states. Enhancing transitions from a bright state to a dark state with different spins means that the latter can be revealed by ordinary spectroscopy. We propose a modification of the standard two-dimensional spectroscopic scheme in which a three pulse sequence is encased in a magnetic pulse. Its role is to drive transitions between a bright and a dark spin state, making the latter susceptible to spectroscopic investigation.

14.
Photosynth Res ; 135(1-3): 55-64, 2018 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-28741055

RESUMEN

Carotenoids are fundamental building blocks of natural light harvesters with convoluted and ultrafast energy deactivation networks. In order to disentangle such complex relaxation dynamics, several studies focused on transient absorption measurements and their dependence on the pump wavelength. However, such findings are inconclusive and sometimes contradictory. In this study, we compare internal conversion dynamics in [Formula: see text]-carotene, pumped at the first, second, and third vibronic progression peak. Instead of employing data fitting algorithms based on global analysis of the transient absorption spectra, we apply a fully quantum mechanical model to treat the high-frequency symmetric carbon-carbon (C=C and C-C) stretching modes explicitly. This model successfully describes observed population dynamics as well as spectral line shapes in their time-dependence and allows us to reach two conclusions: Firstly, the broadening of the induced absorption upon excess excitation is an effect of vibrational cooling in the first excited state ([Formula: see text]). Secondly, the internal conversion rate between the second excited state ([Formula: see text]) and [Formula: see text] crucially depends on the relative curve displacement. The latter point serves as a new perspective on solvent- and excitation wavelength-dependent experiments and lifts contradictions between several studies found in literature.


Asunto(s)
Carotenoides/química , Vibración , Ciclohexanos/química , Luz , Modelos Biológicos , Espectroscopía Infrarroja Corta
15.
Photosynth Res ; 135(1-3): 45-54, 2018 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-28523607

RESUMEN

The peripheral light-harvesting antenna complex (LH2) of purple photosynthetic bacteria is an ideal testing ground for models of structure-function relationships due to its well-determined molecular structure and ultrafast energy deactivation. It has been the target for numerous studies in both theory and ultrafast spectroscopy; nevertheless, certain aspects of the convoluted relaxation network of LH2 lack a satisfactory explanation by conventional theories. For example, the initial carotenoid-to-bacteriochlorophyll energy transfer step necessary on visible light excitation was long considered to follow the Förster mechanism, even though transfer times as short as 40 femtoseconds (fs) have been observed. Such transfer times are hard to accommodate by Förster theory, as the moderate coupling strengths found in LH2 suggest much slower transfer within this framework. In this study, we investigate LH2 from Phaeospirillum (Ph.) molischianum in two types of transient absorption experiments-with narrowband pump and white-light probe resulting in 100 fs time resolution, and with degenerate broadband 10 fs pump and probe pulses. With regard to the split Qx band in this system, we show that vibronically mediated transfer explains both the ultrafast carotenoid-to-B850 transfer, and the almost complete lack of transfer to B800. These results are beyond Förster theory, which predicts an almost equal partition between the two channels.


Asunto(s)
Bacterioclorofilas/metabolismo , Carotenoides/metabolismo , Transferencia de Energía , Complejos de Proteína Captadores de Luz/metabolismo , Proteobacteria/metabolismo , Análisis de Fourier , Rayos Láser , Espectrofotometría Ultravioleta , Factores de Tiempo
16.
Opt Express ; 26(3): 2270-2279, 2018 Feb 05.
Artículo en Inglés | MEDLINE | ID: mdl-29401767

RESUMEN

We introduce a broadband single-pixel spectro-temporal fluorescence detector, combining time-correlated single photon counting (TCSPC) with Fourier transform (FT) spectroscopy. A birefringent common-path interferometer (CPI) generates two time-delayed replicas of the sample's fluorescence. Via FT of their interference signal at the detector, we obtain a two-dimensional map of the fluorescence as a function of detection wavelength and emission time, with high temporal and spectral resolution. Our instrument is remarkably simple, as it only requires the addition of a CPI to a standard single-pixel TCSPC system, and it shows a readily adjustable spectral resolution with inherently broad bandwidth coverage.

17.
Biochim Biophys Acta ; 1857(9): 1627-1640, 2016 09.
Artículo en Inglés | MEDLINE | ID: mdl-27372198

RESUMEN

While the majority of the photochemical states and pathways related to the biological capture of solar energy are now well understood and provide paradigms for artificial device design, additional low-energy states have been discovered in many systems with obscure origins and significance. However, as low-energy states are naively expected to be critical to function, these observations pose important challenges. A review of known properties of low energy states covering eight photochemical systems, and options for their interpretation, are presented. A concerted experimental and theoretical research strategy is suggested and outlined, this being aimed at providing a fully comprehensive understanding.


Asunto(s)
Fotosíntesis , Proteínas Bacterianas/química , Complejos de Proteína Captadores de Luz/química , Complejo de Proteína del Fotosistema I/química , Complejo de Proteína del Fotosistema II/química , Ficobilisomas/química
18.
Opt Express ; 25(12): A483-A490, 2017 Jun 12.
Artículo en Inglés | MEDLINE | ID: mdl-28788879

RESUMEN

The correlation of molecular excitation and emission events provides a powerful multidimensional spectroscopy tool, by relating transitions from electronic ground and excited states through two-dimensional excitation-emission maps. Here we present a compact, fast and versatile Fourier-transform spectrometer, combining absorption and excitation-emission fluorescence spectroscopy in the visible. We generate phase-locked excitation pulse pairs via an inherently stable birefringent wedge-based common-path interferometer, retaining all the advantages of Fourier-transform spectroscopy but avoiding active stabilization or auxiliary tracking beams. We employ both coherent and incoherent excitation sources on dye molecules in solution, with data acquisition times in the range of seconds and minutes, respectively.

19.
Phys Chem Chem Phys ; 19(36): 24752-24760, 2017 Sep 20.
Artículo en Inglés | MEDLINE | ID: mdl-28868559

RESUMEN

For the description of vibrational effects in electronic spectra, harmonic vibrations are a convenient and widespread model. However, spectra of larger organic molecules in solution usually exhibit signs of vibrational anharmonicity, as revealed by deviation from the mirror image symmetry between linear absorption and emission spectra of the harmonic case. For perylene and terylene, two molecules with rigid Pi-electron systems and strong vibrational-electronic coupling, we employ a simple but effective theoretical model, which introduces cubic anharmonicity in the potentials of electronic surfaces. Vibrational anharmonicity is then readily quantified based on the experimentally measured peak ratio of the first vibronic progression peaks in linear absorption and emission. This method is straightforward but not applicable if emission from the initially excited state is short lived. For such a case, we employ two-dimensional electronic spectroscopy in the visible as a comprehensive time-resolved technique for the experimental determination of the vibrational anharmonicity of pinacyanol iodide, a solvated dye molecule exhibiting ultrafast excited state isomerization. We show that the ratio between certain cross peak amplitudes in two-dimensional electronic spectra is a direct measure of vibrational anharmonicity.

20.
Phys Chem Chem Phys ; 17(29): 19491-9, 2015 Jul 15.
Artículo en Inglés | MEDLINE | ID: mdl-26146364

RESUMEN

Energy relaxation between two electronic states of a molecule is mediated by a set of relevant vibrational states. We describe this fundamental process in a fully quantum mechanical framework based on first principles. This approach explains population transfer rates as well as describes the entire transient absorption signal as vibronic transitions between electronic states. By applying this vibronic energy relaxation approach to carotenoids, we show that ß-carotene's transient absorption signal can be understood without invoking the intensely debated S* electronic state. For a carotenoid with longer chain length, we find that vibronic energy relaxation does not suffice to explain all features in the transient absorption spectra, which we relate to an increased ground state structural inhomogeneity. Our modeling approach is generally applicable to photophysical deactivation processes in molecules. As such, it represents a well-founded alternative to data fitting techniques such as global target analysis.


Asunto(s)
Carotenoides/química , Teoría Cuántica , Algoritmos , Estructura Molecular , Vibración , beta Caroteno/química
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