Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 37
Filtrar
Más filtros

Banco de datos
Tipo del documento
Intervalo de año de publicación
1.
Nature ; 599(7883): 41-46, 2021 11.
Artículo en Inglés | MEDLINE | ID: mdl-34671160

RESUMEN

We are a group of archaeologists, anthropologists, curators and geneticists representing diverse global communities and 31 countries. All of us met in a virtual workshop dedicated to ethics in ancient DNA research held in November 2020. There was widespread agreement that globally applicable ethical guidelines are needed, but that recent recommendations grounded in discussion about research on human remains from North America are not always generalizable worldwide. Here we propose the following globally applicable guidelines, taking into consideration diverse contexts. These hold that: (1) researchers must ensure that all regulations were followed in the places where they work and from which the human remains derived; (2) researchers must prepare a detailed plan prior to beginning any study; (3) researchers must minimize damage to human remains; (4) researchers must ensure that data are made available following publication to allow critical re-examination of scientific findings; and (5) researchers must engage with other stakeholders from the beginning of a study and ensure respect and sensitivity to stakeholder perspectives. We commit to adhering to these guidelines and expect they will promote a high ethical standard in DNA research on human remains going forward.


Asunto(s)
Cadáver , ADN Antiguo/análisis , Guías como Asunto , Genética Humana/ética , Internacionalidad , Biología Molecular/ética , Indio Americano o Nativo de Alaska , Antropología/ética , Arqueología/ética , Relaciones Comunidad-Institución , Humanos , Pueblos Indígenas , Participación de los Interesados , Traducciones
2.
Chembiochem ; 22(6): 1072-1078, 2021 03 16.
Artículo en Inglés | MEDLINE | ID: mdl-33112485

RESUMEN

A novel class of nucleotide analogues with a dioxane ring as central scaffold has been developed. Synthetic routes in two diastereomeric series were realized, and the final thymidine analogues were synthesized with common functionalities for the automated oligonucleotide synthesis. The chemical space of the initially derived nucleotides was expanded by changing the central dioxane to analogous morpholine derivatives. This opens up the possibility for further derivatization by attaching different substituents at the morpholine nitrogen. The novel nucleotide building blocks were incorporated into double-stranded RNA sequences, and their hybridization properties investigated by melting-temperature analysis. Both scaffolds, dioxanes and morpholines, had an equal impact on double-strand stability, but Tm values differed depending on the chirality in the six-membered ring.


Asunto(s)
Dioxanos/química , Morfolinos/metabolismo , ARN Bicatenario/metabolismo , Morfolinos/síntesis química , Morfolinos/química , Hibridación de Ácido Nucleico , Estereoisomerismo , Timidina/química , Temperatura de Transición
3.
Mol Pharm ; 18(3): 1048-1060, 2021 03 01.
Artículo en Inglés | MEDLINE | ID: mdl-33444501

RESUMEN

Targeted extrahepatic delivery of siRNA remains a challenging task in the field of nucleic acid therapeutics. An ideal delivery tool must internalize siRNA exclusively into the cells of interest without affecting the silencing activity of siRNA. Here, we report the use of anti-EGFR Nanobodies (trademark of Ablynx N.V.) as tools for targeted siRNA delivery. A straightforward procedure for site-specific conjugation of siRNA to an engineered C-terminal cysteine residue on the Nanobody (trademark of Ablynx N.V.) is described. We show that siRNA-conjugated Nanobodies (Nb-siRNA) retain their binding to EGFR and enter EGFR-positive cells via receptor-mediated endocytosis. The activity of Nb-siRNAs was assessed by measuring the knockdown of a housekeeping gene (AHSA1) in EGFR-positive and EGFR-negative cells. We demonstrate that Nb-siRNAs are active in vitro and induce mRNA cleavage in the targeted cell line. In addition, we discuss the silencing activity of siRNA conjugated to fused Nbs with various combinations of EGFR-binding building blocks. Finally, we compare the performance of Nb-siRNA joined by four different linkers and discuss the advantages and limitations of using cleavable and noncleavable linkers in the context of Nanobody-mediated siRNA delivery.


Asunto(s)
Neoplasias/genética , Neoplasias/terapia , ARN Interferente Pequeño/genética , Anticuerpos de Dominio Único/genética , Línea Celular Tumoral , Receptores ErbB/genética , Silenciador del Gen/fisiología , Células Hep G2 , Humanos , Ácidos Nucleicos/genética
4.
Theor Appl Genet ; 132(4): 1089-1107, 2019 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-30547184

RESUMEN

KEY MESSAGE: Major resistance gene to rhynchosporium, Rrs18, maps close to the telomere on the short arm of chromosome 6H in barley. Rhynchosporium or barley scald caused by a fungal pathogen Rhynchosporium commune is one of the most destructive and economically important diseases of barley in the world. Testing of Steptoe × Morex and CIho 3515 × Alexis doubled haploid populations has revealed a large effect QTL for resistance to R. commune close to the telomere on the short arm of chromosome 6H, present in both populations. Mapping markers flanking the QTL from both populations onto the 2017 Morex genome assembly revealed a rhynchosporium resistance locus independent of Rrs13 that we named Rrs18. The causal gene was fine mapped to an interval of 660 Kb using Steptoe × Morex backcross 1 S2 and S3 lines with molecular markers developed from Steptoe exome capture variant calling. Sequencing RNA from CIho 3515 and Alexis revealed that only 4 genes within the Rrs18 interval were transcribed in leaf tissue with a serine/threonine protein kinase being the most likely candidate for Rrs18.


Asunto(s)
Ascomicetos/fisiología , Cromosomas de las Plantas/genética , Resistencia a la Enfermedad/genética , Hordeum/genética , Hordeum/microbiología , Enfermedades de las Plantas/genética , Enfermedades de las Plantas/microbiología , Ascomicetos/aislamiento & purificación , Cruzamientos Genéticos , Genes de Plantas , Marcadores Genéticos , Anotación de Secuencia Molecular , Mapeo Físico de Cromosoma , Polimorfismo de Nucleótido Simple/genética , Sitios de Carácter Cuantitativo/genética
5.
Oecologia ; 181(2): 369-79, 2016 06.
Artículo en Inglés | MEDLINE | ID: mdl-26875186

RESUMEN

Motivated by decreasing foliar phosphorus (P) concentrations in Fagus sylvatica L. forests, we studied P recycling depending on P fertilization in mesocosms with juvenile trees and soils of two contrasting F. sylvatica L. forests in a greenhouse. We hypothesized that forests with low soil P availability are better adapted to recycle P than forests with high soil P availability. The P resorption efficiency from senesced leaves was significantly higher at the P-poor site (70 %) than at the P-rich site (48 %). P fertilization decreased the resorption efficiency significantly at the P-poor site to 41 %, while it had no effect at the P-rich site. Both acid and alkaline phosphatase activity were higher in the rhizosphere of the P-poor than of the P-rich site by 53 and 27 %, respectively, while the activities did not differ in the bulk soil. Fertilization decreased acid phosphatase activity significantly at the P-poor site in the rhizosphere, but had no effect on the alkaline, i.e., microbial, phosphatase activity at any site. Acid phosphatase activity in the P-poor soil was highest in the rhizosphere, while in the P-rich soil, it was highest in the bulk soil. We conclude that F. sylvatica resorbed P more efficiently from senescent leaves at low soil P availability than at high P availability and that acid phosphatase activity in the rhizosphere but not in the bulk soil was increased at low P availability. Moreover, we conclude that in the P-rich soil, microbial phosphatases contributed more strongly to total phosphatase activity than plant phosphatases.


Asunto(s)
Fagus , Fósforo , Nitrógeno , Monoéster Fosfórico Hidrolasas , Suelo , Árboles
6.
Int Immunol ; 26(1): 35-46, 2014 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-24065781

RESUMEN

OBJECTIVES: The therapeutic application of small interfering RNAs (siRNAs) is limited by the induction of severe off-target effects, especially in the liver. Therefore, we assessed the potential of differently modified siRNAs to induce the hepatic innate immune system in vitro and in vivo. METHODS: Primary isolated liver cells were transfected with siRNAs against apolipoprotein B1 (APOB1), luciferase (LUC) or galactosidase (GAL). For in vivo use, siRNAs were formulated in lipid nanoparticles (LNPs) and administered intravenously to C57BL/6 mice. Liver tissue was collected 6-48 h after injection and knock-down efficiency or immune responses were determined by quantitative reverse-transcription-linked PCR. RESULTS: Unmodified GAL siRNA transiently induced the expression of TNF-α, IL-6, IL-10, IFN-ß and IFN-sensitive gene 15 in vivo, whereas a formulation of 2'-O-methylated-LUC siRNA had no such effects. Formulation of unmodified APOB1-specific siRNA suppressed APOB1 mRNA levels by ~80% in the liver 48h after application. The results were paralleled in vitro, where transfection of liver cells with unmodified siRNAs, but not with chemically modified siRNAs, led to cell-type-specific induction of immune genes. These immune responses were not observed in MYD88-deficient mice or in chloroquine-treated cells in vitro. CONCLUSIONS: Our data indicate that siRNAs activate endosomal Toll-like receptors in different liver-derived cell types to various degrees, in vitro. LNP-formulated siRNA selectively leads to hepatic knock-down of target genes in vivo. Here, off-target immune responses are restricted to non-parenchymal liver cells. However, 2'-O-methyl modifications of siRNA largely avoid immune-stimulatory effects, which is a crucial prerequisite for the development of safe and efficient RNA-interference-based therapeutics.


Asunto(s)
Hepatocitos/inmunología , Sistema Inmunológico/inmunología , Inmunidad Innata/inmunología , ARN Interferente Pequeño/química , ARN Interferente Pequeño/inmunología , Receptores Toll-Like/inmunología , Animales , Inmunidad Innata/genética , Interleucina-10/genética , Interleucina-10/inmunología , Interleucina-6/genética , Interleucina-6/inmunología , Hígado , Ratones , Ratones Endogámicos C57BL , ARN Mensajero/genética , ARN Mensajero/inmunología , ARN Interferente Pequeño/genética , Receptores Toll-Like/genética , Transfección/métodos , Factor de Necrosis Tumoral alfa/genética , Factor de Necrosis Tumoral alfa/inmunología
7.
Nucleic Acids Res ; 41(5): 3436-45, 2013 Mar 01.
Artículo en Inglés | MEDLINE | ID: mdl-23325848

RESUMEN

The retinoic acid inducible gene-I (RIG-I)-like family of receptors is positioned at the front line of our innate cellular defence system. RIG-I detects and binds to foreign duplex RNA in the cytoplasm of both immune and non-immune cells, and initiates the induction of type I interferons and pro-inflammatory cytokines. The mechanism of RIG-I activation by double-stranded RNA (dsRNA) involves a molecular rearrangement proposed to expose the N-terminal pair of caspase activation recruitment domains, enabling an interaction with interferon-beta promoter stimulator 1 (IPS-1) and thereby initiating downstream signalling. dsRNA is particularly stimulatory when longer than 20 bp, potentially through allowing binding of more than one RIG-I molecule. Here, we characterize full-length RIG-I and RIG-I subdomains combined with a stimulatory 29mer dsRNA using multi-angle light scattering and size-exclusion chromatography-coupled small-angle X-ray scattering, to build up a molecular model of RIG-I before and after the formation of a 2:1 protein:dsRNA assembly. We report the small-angle X-ray scattering-derived solution structure of the human apo-RIG-I and observe that on binding of RIG-I to dsRNA in a 2:1 ratio, the complex becomes highly extended and flexible. Hence, here we present the first model of the fully activated oligomeric RIG-I.


Asunto(s)
Apoproteínas/química , ARN Helicasas DEAD-box/química , ARN Bicatenario/química , Cromatografía en Gel , Proteína 58 DEAD Box , Humanos , Modelos Moleculares , Fragmentos de Péptidos/química , Unión Proteica , Estructura Cuaternaria de Proteína , Estructura Secundaria de Proteína , Estructura Terciaria de Proteína , Proteolisis , Receptores Inmunológicos , Dispersión del Ángulo Pequeño , Tripsina/química , Difracción de Rayos X
8.
Mol Ther ; 21(5): 973-85, 2013 May.
Artículo en Inglés | MEDLINE | ID: mdl-23439496

RESUMEN

RNA interference (RNAi)-based therapeutics have the potential to treat chronic hepatitis B virus (HBV) infection in a fundamentally different manner than current therapies. Using RNAi, it is possible to knock down expression of viral RNAs including the pregenomic RNA from which the replicative intermediates are derived, thus reducing viral load, and the viral proteins that result in disease and impact the immune system's ability to eliminate the virus. We previously described the use of polymer-based Dynamic PolyConjugate (DPC) for the targeted delivery of siRNAs to hepatocytes. Here, we first show in proof-of-concept studies that simple coinjection of a hepatocyte-targeted, N-acetylgalactosamine-conjugated melittin-like peptide (NAG-MLP) with a liver-tropic cholesterol-conjugated siRNA (chol-siRNA) targeting coagulation factor VII (F7) results in efficient F7 knockdown in mice and nonhuman primates without changes in clinical chemistry or induction of cytokines. Using transient and transgenic mouse models of HBV infection, we show that a single coinjection of NAG-MLP with potent chol-siRNAs targeting conserved HBV sequences resulted in multilog repression of viral RNA, proteins, and viral DNA with long duration of effect. These results suggest that coinjection of NAG-MLP and chol-siHBVs holds great promise as a new therapeutic for patients chronically infected with HBV.


Asunto(s)
Virus de la Hepatitis B/genética , Hepatitis B Crónica/genética , Hepatocitos/metabolismo , Interferencia de ARN , Acetilgalactosamina/análogos & derivados , Acetilgalactosamina/química , Secuencia de Aminoácidos , Animales , Sitios de Unión , Colesterol/química , Sistemas de Liberación de Medicamentos , Femenino , Técnicas de Silenciamiento del Gen , Terapia Genética , Genotipo , Hepatitis B Crónica/terapia , Hepatocitos/virología , Humanos , Macaca fascicularis , Masculino , Ratones , Péptidos/química , ARN Interferente Pequeño/administración & dosificación , ARN Interferente Pequeño/efectos adversos , ARN Interferente Pequeño/química , ARN Interferente Pequeño/genética , ARN Viral/química , ARN Viral/genética
9.
Theor Appl Genet ; 126(12): 3091-102, 2013 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-24068343

RESUMEN

KEY MESSAGE: In two Spanish barley landraces with outstanding resistance to scald, the Rrs1 Rh4 locus was fine mapped including all known markers used in previous studies and closely linked markers were developed. Scald, caused by Rhynchosporium commune, is one of the most prevalent barley diseases worldwide. A search for new resistance sources revealed that Spanish landrace-derived lines SBCC145 and SBCC154 showed outstanding resistance to scald. They were crossed to susceptible cultivar Beatrix to create large DH-mapping populations of 522 and 416 DH lines that were scored for disease resistance in the greenhouse using two R. commune isolates. To ascertain the pattern of resistance, parents and reference barley lines with known scald resistance were phenotyped with a panel of differential R. commune isolates. Subpopulations were genotyped with the Illumina GoldenGate 1,536 SNP Assay and a large QTL in the centromeric region of chromosome 3H, known to harbour several scald resistance genes and/or alleles, was found in both populations. Five SNP markers closest to the QTL were converted into CAPS markers. These CAPS markers, together with informative SSR markers used in other scald studies, confirmed the presence of the Rrs1 locus. The panel of differential scald isolates indicated that the allele carried by both donors was Rrs1 Rh4 . The genetic distance between Rrs1 and its flanking markers was 1.2 cM (11_0010) proximally and 0.9 cM (11_0823) distally, which corresponds to a distance of just below 9 Mbp. The number and nature of scald resistance genes on chromosome 3H are discussed. The effective Rrs1 allele found and the closely linked markers developed are already useful tools for molecular breeding programs and provide a good step towards the identification of candidate genes.


Asunto(s)
Ascomicetos/patogenicidad , Mapeo Cromosómico , Resistencia a la Enfermedad/genética , Genes de Plantas/genética , Genética de Población , Hordeum/genética , Inmunidad Innata/genética , Enfermedades de las Plantas/genética , Ascomicetos/clasificación , Cromosomas de las Plantas/genética , ADN de Plantas/genética , Marcadores Genéticos/genética , Hordeum/inmunología , Hordeum/microbiología , Repeticiones de Microsatélite/genética , Enfermedades de las Plantas/inmunología , Enfermedades de las Plantas/microbiología
10.
Mol Ther ; 20(1): 91-100, 2012 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-21988874

RESUMEN

We have designed a series of versatile lipopolyamines which are amenable to chemical modification for in vivo delivery of small interfering RNA (siRNA). This report focuses on one such lipopolyamine (Staramine), its functionalized derivatives and the lipid nanocomplexes it forms with siRNA. Intravenous (i.v.) administration of Staramine/siRNA nanocomplexes modified with methoxypolyethylene glycol (mPEG) provides safe and effective delivery of siRNA and significant target gene knockdown in the lungs of normal mice, with much lower knockdown in liver, spleen, and kidney. Although siRNA delivered via Staramine is initially distributed across all these organs, the observed clearance rate from the lung tissue is considerably slower than in other tissues resulting in prolonged siRNA accumulation on the timescale of RNA interference (RNAi)-mediated transcript depletion. Complete blood count (CBC) analysis, serum chemistry analysis, and histopathology results are all consistent with minimal toxicity. An in vivo screen of mPEG modified Staramine nanocomplexes-containing siRNAs targeting lung cell-specific marker proteins reveal exclusive transfection of endothelial cells. Safe and effective delivery of siRNA to the lung with chemically versatile lipopolyamine systems provides opportunities for investigation of pulmonary cell function in vivo as well as potential treatments of pulmonary disease with RNAi-based therapeutics.


Asunto(s)
Poliaminas Biogénicas/química , Pulmón/metabolismo , ARN Interferente Pequeño/administración & dosificación , Animales , Poliaminas Biogénicas/síntesis química , Poliaminas Biogénicas/metabolismo , Recuento de Células Sanguíneas , Femenino , Silenciador del Gen , Inyecciones Intravenosas , Pulmón/patología , Ratones , Ratones Endogámicos ICR , Ratones Transgénicos , Nanoconjugados/administración & dosificación , Nanoconjugados/efectos adversos , Nanoconjugados/química , Polietilenglicoles/química , ARN Interferente Pequeño/síntesis química , ARN Interferente Pequeño/metabolismo , Mucosa Respiratoria/efectos de los fármacos , Mucosa Respiratoria/metabolismo , Transfección
11.
Clin Lab ; 58(5-6): 515-25, 2012.
Artículo en Inglés | MEDLINE | ID: mdl-22783583

RESUMEN

BACKGROUND: In the second generation of the point-of-care (POC) assay Roche CARDIAC proBNP, the upper limit of the measuring range was extended from 3000 to 9000 ng/L. METHODS: A thirteen-site multicentre evaluation was carried out to assess the analytical performance of the POC NT-proBNP assay and to compare it with a laboratory N-terminal pro-brain natriuretic peptide (NT-proBNP) assay. RESULTS: In method comparisons of six lots of POC NT-proBNP with the lab reference method (Elecsys proBNP) mean bias ranged from -10 to +17%. In lot-to-lot comparisons all six investigated lots of POC NT-proBNP showed excellent agreement, with mean bias between -7% and +2%. The majority of all coefficients of variation obtained from ten-fold measurements using 56 native blood samples were below 8%. No interference was observed with hemolytic blood (hemoglobin concentrations up to 0.12 mmol/L), lipemic blood (triglyceride concentrations up to 14.0 mmol/L) nor icteric blood (bilirubin concentrations up to 63 micromol/L). Hematocrit values between 24% and 51% had no influence on the assay result. High NT-proBNP concentrations above the measuring range of POC NT-proBNP did not lead to false low results due to potential high-dose hook effect. Results with POC NT-proBNP were not influenced by different ambient temperatures (18 degrees C to 32 degrees C), the sample material used, nor by over- or underdosing by 15 microL compared to the regular sample volume of 150 microL. CONCLUSIONS: The POC NT-proBNP assay showed an excellent analytical performance including a good agreement with the laboratory method. The assay is therefore suitable for its intended use in point-of-care settings.


Asunto(s)
Factor Natriurético Atrial/sangre , Técnicas de Diagnóstico Cardiovascular/instrumentación , Sistemas de Atención de Punto , Precursores de Proteínas/sangre , Técnicas de Diagnóstico Cardiovascular/normas , Humanos , Sistemas de Atención de Punto/normas , Control de Calidad , Reproducibilidad de los Resultados , Temperatura
12.
Nucleic Acids Res ; 38(20): 7320-31, 2010 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-20610434

RESUMEN

During RNA-induced silencing complex (RISC) assembly the guide (or antisense) strand has to separate from its complementary passenger (or sense) strand to generate the active RISC complex. Although this process was found to be facilitated through sense strand cleavage, there is evidence for an alternate mechanism, in which the strands are dissociated without prior cleavage. Here we show that the potency of siRNA can be improved by modulating the internal thermodynamic stability profile with chemical modifications. Using a model siRNA targeting the firefly luciferase gene with subnanomolar IC50, we found that placement of thermally destabilizing modifications, such as non-canonical bases like 2,4-difluorotoluene or single base pair mismatches in the central region of the sense strand (9-12 nt), significantly improve the potency. For this particular siRNA, the strongest correlation between the decrease in thermal stability and the increase in potency was found at position 10. Controls with stabilized sugar-phosphate backbone indicate that enzymatic cleavage of the sense strand prior to strand dissociation is not required for silencing activity. Similar potency-enhancing effects were observed as this approach was applied to other functional siRNAs targeting a different site on the firefly luciferase transcript or endogenously expressed PTEN.


Asunto(s)
ARN Interferente Pequeño/química , Termodinámica , Disparidad de Par Base , Células HeLa , Humanos , Interferencia de ARN , Estabilidad del ARN
13.
J Med Chem ; 65(20): 13736-13752, 2022 10 27.
Artículo en Inglés | MEDLINE | ID: mdl-36223135

RESUMEN

To expand the applicability of recently developed dioxane- and morpholino-based nucleotide analogues, their seed region destabilizing properties in small interfering RNAs (siRNAs) were investigated in order to improve potential off-target profiles. For this purpose, the corresponding adenosine analogues were synthesized in two diastereomeric series as building blocks for the automated oligonucleotide synthesis. The obtained nucleotide precursors were integrated at position 7 of an siRNA antisense strand, targeting transthyretin messenger RNA. Evaluation of the melting temperatures revealed significant differences in the obtained duplex stabilities between the two diastereomeric series, while the influence of the central scaffold was small. All siRNAs containing these novel nucleotide structures showed improved off-target profiles in vitro compared to their parent sequence with the common 2'-OMe-modified adenosine at the same position. In contrast, in vivo potencies were highly dependent on the chirality within the six-membered nucleotide scaffolds and showed high mRNA downregulations for the (2R,6R)-configured diastereomers.


Asunto(s)
Nucleótidos , Prealbúmina , ARN Interferente Pequeño/genética , ARN Interferente Pequeño/química , Interferencia de ARN , Prealbúmina/genética , Morfolinos/farmacología , ARN Mensajero/genética , Dioxanos , Adenosina
14.
Anal Biochem ; 414(1): 47-57, 2011 Jul 01.
Artículo en Inglés | MEDLINE | ID: mdl-21376008

RESUMEN

Small interfering RNAs (siRNAs) are emerging as a novel therapeutic modality for the specific inhibition of target gene expression. The development of siRNA-based therapeutics requires in-depth knowledge of the manufacturing process as well as adequate analytical methods to characterize this class of molecules. Here the impurity formation during the annealing of siRNA was investigated. Two siRNAs containing common chemical RNA modifications (2'-O-methyl, 2'-deoxy-2'-fluoro, 2'-deoxy-ribose, and phosphorothioate linkages) were used to determine major side reactions-such as 2',3'-isomerization, strand scission, and HF elimination-depending on annealing parameters such as RNA concentration, presence of cations, temperature, and time. Individual impurities were characterized using analytical size exclusion chromatography, denaturing and nondenaturing ion-pair reversed-phase high-performance liquid chromatography, differential scanning calorimetry, and ultraviolet spectrometry. The degradation pathways described in this work can lead to significantly reduced product quality and compromised drug activity. The data reported here provide background to successfully address challenges associated with the manufacture of siRNAs and other nucleic acid therapeutics such as aptamers, spiegelmers, and decoy and antisense oligonucleotides.


Asunto(s)
ARN Interferente Pequeño/química , Ribosa/análogos & derivados , Cromatografía en Gel , Cromatografía Líquida de Alta Presión , Calor , Espectrometría de Masas , Conformación de Ácido Nucleico , Oligonucleótidos/química
15.
J Med Chem ; 64(10): 6838-6855, 2021 05 27.
Artículo en Inglés | MEDLINE | ID: mdl-33950677

RESUMEN

A morpholine-based nucleotide analog was developed as a building block for hepatic siRNA targeting and stabilization. Attachment of an asialoglycoprotein-binding GalNAc ligand at the morpholine nitrogen was realized with different linkers. The obtained morpholino GalNAc scaffolds were coupled to the sense strand of a transthyretin-targeting siRNA and tested for their knockdown potency in vitro and in vivo. A clear structure-activity relationship was developed with regard to the linker type and length as well as the attachment site of the morpholino GalNAc moieties at the siRNA sense strand. Further, simple alkylation of the morpholine nitrogen led to a nucleotide analog, which increased siRNA stability, when used as a double 3'-overhang at the sense strand sequence. Combination of the best morpholino GalNAc building blocks as targeting nucleotides with an optimized stabilizing alkyl-substituted morpholine as 3'-overhangs resulted in siRNAs without any phosphorothioate stabilization in the sense strand and clearly improved the duration of action in vivo.


Asunto(s)
Morfolinas/química , Nucleótidos/química , ARN Interferente Pequeño/metabolismo , Acetilgalactosamina/química , Animales , Células Cultivadas , Femenino , Hepatocitos/citología , Hepatocitos/metabolismo , Ligandos , Ratones , Ratones Endogámicos C57BL , Nucleótidos/síntesis química , Nucleótidos/metabolismo , Prealbúmina/antagonistas & inhibidores , Prealbúmina/genética , Prealbúmina/metabolismo , Interferencia de ARN , Estabilidad del ARN , ARN Interferente Pequeño/química
16.
Med Sci Monit ; 15(11): MT143-6, 2009 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-19865062

RESUMEN

BACKGROUND: Knee wear simulator studies are performed to evaluate the wear behavior of implants. These wear studies simulate in vivo situations as closely as possible. Simulation of the human gait cycle is often carried out continuously according to international standards. However, implants are not loaded continuously in vivo, so it might be advisable to implement resting periods in which no motion occurs. MATERIAL/METHODS: In the present study the influence of resting periods on the wear behavior of a commercial implant was analyzed using a force-controlled AMTI knee simulator. RESULTS: The wear rates were 2.27+/-0.23 mg/10(6) cycles for a simulation with resting periods and 2.85+/-0.27 mg/10(6) cycles for a reference simulation without resting periods. There was no significant difference (p=0.22) in wear behavior between these two tests. CONCLUSIONS: The present study shows that continuous simulation without the implementation of resting periods is a valid approach for assessing the wear of knee implants.


Asunto(s)
Simulación por Computador , Prótesis de la Rodilla , Polietileno/química , Descanso/fisiología , Marcha , Humanos
17.
PLoS One ; 14(12): e0225835, 2019.
Artículo en Inglés | MEDLINE | ID: mdl-31794591

RESUMEN

Systemic inhibition of dipeptidyl peptidase 4 (dpp4) represents an effective and established treatment option for type 2 diabetes (T2D). The current study investigated in mice if a liver selective knock-down of dpp4 by therapeutic siRNAs could be a novel, similarly effective treatment option for T2D. Furthermore, the potential effects on hepatic steatosis, inflammation and lipid metabolism were investigated after hepato-selective knock-down of dpp4. The knock-down efficiency and IC50 values of siRNAs targeting dpp4 were analyzed in PC3 cells. In two independent studies, either db/db mice or C57BL/6J mice were injected intravenously with a liposomal formulation of siRNAs targeting either dpp4 or a non-targeting control, followed by metabolically characterization. In comparator groups, additional cohorts of mice were treated with an oral dpp4 inhibitor. In both animal studies, we observed a robust knock-down (~75%) of hepatic dpp4 with a potent siRNA. Hepatic dpp4 knockdown did not significantly affect glucose metabolism or circulating incretin concentrations in both animal studies. However, in obese and diabetic db/db mice hepatic steatosis was reduced and hepatic mRNA expression of acaca, scd1, fasn and pparg was significantly lower after siRNA treatment. Systemic inhibition of the enzymatic dpp4 activity by an oral dpp4 inhibitor significantly improved glucose handling in db/db mice but did not affect hepatic endpoints. These data demonstrate that a targeted reduction of dpp4 expression in the liver may not be sufficient to improve whole-body glucose metabolism in obese and diabetic mice but may improve hepatic lipid metabolism.


Asunto(s)
Diabetes Mellitus Experimental/metabolismo , Técnicas de Silenciamiento del Gen , Glucosa/metabolismo , Metabolismo de los Lípidos , Hígado/metabolismo , ARN Interferente Pequeño/metabolismo , Animales , Línea Celular Tumoral , Dipeptidil Peptidasa 4/metabolismo , Femenino , Regulación de la Expresión Génica , Silenciador del Gen , Humanos , Hiperglucemia/metabolismo , Inflamación/genética , Inflamación/patología , Hígado/patología , Ratones Endogámicos C57BL , Mitocondrias/metabolismo , Especificidad de Órganos
18.
Hepatol Commun ; 3(9): 1221-1234, 2019 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-31497743

RESUMEN

Nonalcoholic steatohepatitis (NASH) is emerging as a major public health issue and is associated with significant liver-related morbidity and mortality. At present, there are no approved drug therapies for NASH. The transcriptional coactivator with PDZ-binding motif (TAZ; encoded by WW domain-containing transcription regulator 1 [WWTR1]) is up-regulated in hepatocytes in NASH liver from humans and has been shown to causally promote inflammation and fibrosis in mouse models of NASH. As a preclinical test of targeting hepatocyte TAZ to treat NASH, we injected stabilized TAZ small interfering RNA (siRNA) bearing the hepatocyte-specific ligand N-acetylgalactosamine (GalNAc-siTAZ) into mice with dietary-induced NASH. As a preventative regimen, GalNAc-siTAZ inhibited inflammation, hepatocellular injury, and the expression of profibrogenic mediators, accompanied by decreased progression from steatosis to NASH. When administered to mice with established NASH, GalNAc-siTAZ partially reversed hepatic inflammation, injury, and fibrosis. Conclusion: Hepatocyte-targeted siTAZ is potentially a novel and clinically feasible treatment for NASH.

19.
Diabetes ; 68(3): 527-542, 2019 03.
Artículo en Inglés | MEDLINE | ID: mdl-30552109

RESUMEN

Antisense oligonucleotide knockdown (ASO-KD) of nicotinamide N-methyltransferase (NNMT) in high-fat diet (HFD)-fed mice has been reported to reduce weight gain and plasma insulin levels and to improve glucose tolerance. Using NNMT-ASO-KD or NNMT knockout mice (NNMT-/-), we tested the hypothesis that Nnmt deletion protects against diet-induced obesity and its metabolic consequences in males and females on obesity-inducing diets. We also examined samples from a human weight reduction (WR) study for adipose NNMT (aNNMT) expression and plasma 1-methylnicotinamide (MNAM) levels. In Western diet (WD)-fed female mice, NNMT-ASO-KD reduced body weight, fat mass, and insulin level and improved glucose tolerance. Although NNMT-/- mice fed a standard diet had no obvious phenotype, NNMT-/- males fed an HFD showed strongly improved insulin sensitivity (IS). Furthermore, NNMT-/- females fed a WD showed reduced weight gain, less fat, and lower insulin levels. However, no improved glucose tolerance was observed in NNMT-/- mice. Although NNMT expression in human fat biopsy samples increased during WR, corresponding plasma MNAM levels significantly declined, suggesting that other mechanisms besides aNNMT expression modulate circulating MNAM levels during WR. In summary, upon NNMT deletion or knockdown in males and females fed different obesity-inducing diets, we observed sex- and diet-specific differences in body composition, weight, and glucose tolerance and estimates of IS.


Asunto(s)
Intolerancia a la Glucosa/metabolismo , Resistencia a la Insulina/fisiología , Nicotinamida N-Metiltransferasa/metabolismo , Obesidad/metabolismo , Animales , Composición Corporal/genética , Composición Corporal/fisiología , Peso Corporal/genética , Peso Corporal/fisiología , Dieta Alta en Grasa/efectos adversos , Intolerancia a la Glucosa/genética , Resistencia a la Insulina/genética , Masculino , Ratones , Ratones Endogámicos C57BL , Ratones Noqueados , Nicotinamida N-Metiltransferasa/genética , Obesidad/genética
20.
Mol Cancer Ther ; 18(12): 2343-2356, 2019 12.
Artículo en Inglés | MEDLINE | ID: mdl-31515294

RESUMEN

The pattern recognition receptor RIG-I plays an important role in the recognition of nonself RNA and antiviral immunity. RIG-I's natural ligand, triphosphate RNA (ppp-RNA), is proposed to be a valuable addition to the growing arsenal of cancer immunotherapy treatment options. In this study, we present comprehensive data validating the concept and utility of treatment with synthetic RIG-I agonist ppp-RNA for the therapy of human cancer, with melanoma as potential entry indication amenable to intratumoral treatment. Using mRNA expression data of human tumors, we demonstrate that RIG-I expression is closely correlated to cellular and cytokine immune activation in a wide variety of tumor types. Furthermore, we confirm susceptibility of cancer cells to ppp-RNA treatment in different cellular models of human melanoma, revealing unexpected heterogeneity between cell lines in their susceptibility to RNA agonist features, including sequence, secondary structures, and presence of triphosphate. Cellular responses to RNA treatment (induction of type I IFN, FasR, MHC-I, and cytotoxicity) were demonstrated to be RIG-I dependent using KO cells. Following ppp-RNA treatment of a mouse melanoma model, we observed significant local and systemic antitumor effects and survival benefits. These were associated with type I IFN response, tumor cell apoptosis, and innate and adaptive immune cell activation. For the first time, we demonstrate systemic presence of tumor antigen-specific CTLs following treatment with RIG-I agonists. Despite potential challenges in the generation and formulation of potent RIG-I agonists, ppp-RNA or analogues thereof have the potential to play an important role for cancer treatment in the next wave of immunotherapy.


Asunto(s)
Proteína 58 DEAD Box/uso terapéutico , Melanoma/tratamiento farmacológico , Melanoma/genética , Polifosfatos/uso terapéutico , ARN/metabolismo , Animales , Línea Celular Tumoral , Proteína 58 DEAD Box/farmacología , Humanos , Melanoma/patología , Ratones , Polifosfatos/farmacología , Receptores Inmunológicos , Transducción de Señal , Transfección
SELECCIÓN DE REFERENCIAS
DETALLE DE LA BÚSQUEDA