Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 123
Filtrar
Más filtros

Intervalo de año de publicación
1.
Parasitology ; 151(2): 191-199, 2024 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-38116659

RESUMEN

Lice were collected from 579 hummingbirds, representing 49 species, in 19 locations in Brazil, Costa Rica, Honduras, Paraguay and Peru, at elevations 0­3000 m above sea level. The following variables were included in an ecological analysis (1) host species' mean body mass, sexual size dimorphism, sexual dichromatism, migratory behaviour and dominance behaviour; (2) mean elevation, mean and predictability of temperature, mean and predictability of precipitation of the host species' geographic area; (3) prevalence and mean abundance of species of lice as measures of infestation. Ordination methods were applied to evaluate data structure. Since the traits are expressed at different scales (nominal, interval and ratio), a principal component analysis based on d-correlations for the traits and a principal coordinates analysis based on the Gower index for species were applied. Lice or louse eggs were found on 80 (13.8%) birds of 22 species. A total of 267 lice of 4 genera, Trochiloecetes, Trochiliphagus, Myrsidea and Leremenopon, were collected, with a total mean intensity of 4.6. There were positive interactions between migration behaviour and infestation indices, with elevational migrants having a higher prevalence and abundance of lice than resident birds. Further, we found weak negative correlations between host body mass and infestation indices and positive correlations between mean elevation and prevalence and abundance of Trochiliphagus. Thus, formerly unknown differences in the ecological characteristics and infestation measures of Trochiliphagus and Trochiloecetes lice were revealed, which allows a better understanding of these associations and their potential impacts on hummingbirds.


Asunto(s)
Phthiraptera , Animales , Insectos , Aves , Brasil/epidemiología , Costa Rica
2.
Med Vet Entomol ; 37(2): 300-307, 2023 06.
Artículo en Inglés | MEDLINE | ID: mdl-36519496

RESUMEN

A total of 1185 passerine birds representing five species were examined for chewing lice in reed beds in southwestern Slovakia in spring (April) 2008, 2009 and 2016. Additional collecting focused only on chewing lice from Panurus biarmicus (Linnaeus, 1758) (Passeriformes: Panuridae) was carried out in spring (April), summer (July) and autumn (October) 2019. A total of 283 (24%) birds were parasitized by 10 species of chewing lice of four genera: Penenirmus, Menacanthus, Philopterus, and Brueelia. Most birds showed only very light (1-10 lice/host; 74%) to light infestations (11-20 lice/host; 16%). The authors found significantly higher prevalences and mean abundances of chewing lice on residents/short-distance migrants, that is, P. biarmicus, Acrocephalus melanopogon (Temminck, 1823) (Passeriformes: Acrocephalidae), than on long-distance migratory birds, that is, Acrocephalus scirpaceus (Hermann, 1804), Acrocephalus schoenobaenus (Linnaeus, 1758) (Passeriformes: Acrocephalidae), Locustella luscinioides (Savi, 1824) (Passeriformes: Locustellidae). No significant difference was found in the total mean intensity of chewing lice between these two groups of birds. Ischnoceran lice were more prevalent and abundant than amblyceran lice on residents and short-distance migrants, whereas the opposite was found on bird species that migrate long distances. A total of 146 (58%, n = 251) P. biarmicus were parasitized by 1490 chewing lice. Males of P. biarmicus showed higher prevalence and mean abundance than females with gradually descending values of prevalence, mean abundance and mean intensity from spring to autumn. The knowledge of the occurrence and population dynamics of lice on wild passerine birds can be useful in endangered species conservation programs and can also be applied to captive passerine birds, which may be analogous to resident birds in this sense.


Asunto(s)
Enfermedades de las Aves , Ischnocera , Infestaciones por Piojos , Passeriformes , Phthiraptera , Femenino , Masculino , Animales , Infestaciones por Piojos/epidemiología , Infestaciones por Piojos/veterinaria , Eslovaquia/epidemiología , Enfermedades de las Aves/epidemiología , Animales Salvajes
3.
Artículo en Inglés | MEDLINE | ID: mdl-33020161

RESUMEN

Silver gulls carry phylogenetically diverse Escherichia coli, including globally dominant extraintestinal pathogenic E. coli (ExPEC) sequence types and pandemic ExPEC-ST131 clades; however, our large-scale study (504 samples) on silver gulls nesting off the coast of New South Wales identified E. coli ST457 as the most prevalent. A phylogenetic analysis of whole-genome sequences (WGS) of 138 ST457 samples comprising 42 from gulls, 2 from humans (Australia), and 14 from poultry farmed in Paraguay were compared with 80 WGS deposited in public databases from diverse sources and countries. E. coli ST457 strains are phylogenetic group F, carry fimH145, and partition into five main clades in accordance to predominant flagella H-antigen carriage. Although we identified considerable phylogenetic diversity among the 138 ST457 strains, closely related subclades (<100 SNPs) suggested zoonotic or zooanthroponosis transmission between humans, wild birds, and food-producing animals. Australian human clinical and gull strains in two of the clades were closely related (≤80 SNPs). Regarding plasmid content, country, or country/source, specific connections were observed, including I1/ST23, I1/ST314, and I1/ST315 disseminating blaCMY-2 in Australia, I1/ST113 carrying blaCTX-M-8 and mcr-5 in Paraguayan poultry, and F2:A-:B1 plasmids of Dutch origin being detected across multiple ST457 clades. We identified a high prevalence of nearly identical I1/ST23 plasmids carrying blaCMY-2 among Australian gull and clinical human strains. In summary, ST457 is a broad host range, geographically diverse E. coli lineage that can cause human extraintestinal disease, including urinary tract infection, and displays a remarkable ability to capture mobile elements that carry and transmit genes encoding resistance to critically important antibiotics.


Asunto(s)
Infecciones por Escherichia coli , Escherichia coli , Animales , Animales Salvajes , Antibacterianos/farmacología , Australia , Escherichia coli/genética , Infecciones por Escherichia coli/veterinaria , Humanos , Filogenia , Plásmidos/genética , beta-Lactamasas/genética , beta-Lactamas
4.
Artículo en Inglés | MEDLINE | ID: mdl-33139274

RESUMEN

Wild corvids were examined for the presence of carbapenemase-producing Gram-negative bacteria in the United States. A total of 13 isolates were detected among 590 fecal samples of American crow; 11 Providencia rettgeri isolates harboring blaIMP-27 on the chromosome as a class 2 integron gene cassette within the Tn7 transposon, 1 Klebsiella pneumoniae ST258 isolate carrying blaKPC-2 on a pKpQIL-like plasmid as a part of Tn4401a, and 1 Enterobacter bugandensis isolate with blaIMI-1 located within EcloIMEX-2.


Asunto(s)
Cuervos , Infecciones por Klebsiella , Animales , Antibacterianos/farmacología , Proteínas Bacterianas/genética , Enterobacter , Klebsiella pneumoniae/genética , Pruebas de Sensibilidad Microbiana , Plásmidos/genética , Providencia , Estados Unidos , beta-Lactamasas/genética
5.
Mol Ecol ; 29(3): 485-501, 2020 02.
Artículo en Inglés | MEDLINE | ID: mdl-31846173

RESUMEN

Birds are hosts for several zoonotic pathogens. Because of their high mobility, especially of longdistance migrants, birds can disperse these pathogens, affecting their distribution and phylogeography. We focused on Borrelia burgdorferi sensu lato, which includes the causative agents of Lyme borreliosis, as an example for tick-borne pathogens, to address the role of birds as propagation hosts of zoonotic agents at a large geographical scale. We collected ticks from passerine birds in 11 European countries. B. burgdorferi s.l. prevalence in Ixodes spp. was 37% and increased with latitude. The fieldfare Turdus pilaris and the blackbird T. merula carried ticks with the highest Borrelia prevalence (92 and 58%, respectively), whereas robin Erithacus rubecula ticks were the least infected (3.8%). Borrelia garinii was the most prevalent genospecies (61%), followed by B. valaisiana (24%), B. afzelii (9%), B. turdi (5%) and B. lusitaniae (0.5%). A novel Borrelia genospecies "Candidatus Borrelia aligera" was also detected. Multilocus sequence typing (MLST) analysis of B. garinii isolates together with the global collection of B. garinii genotypes obtained from the Borrelia MLST public database revealed that: (a) there was little overlap among genotypes from different continents, (b) there was no geographical structuring within Europe, and (c) there was no evident association pattern detectable among B. garinii genotypes from ticks feeding on birds, questing ticks or human isolates. These findings strengthen the hypothesis that the population structure and evolutionary biology of tick-borne pathogens are shaped by their host associations and the movement patterns of these hosts.


Asunto(s)
Borrelia/genética , Ixodes/microbiología , Enfermedad de Lyme/microbiología , Animales , Enfermedades de las Aves/microbiología , Europa (Continente) , Humanos , Tipificación de Secuencias Multilocus/métodos , Pájaros Cantores/microbiología
6.
Artículo en Inglés | MEDLINE | ID: mdl-31209001

RESUMEN

Wild animals foraging in the human-influenced environment are colonized by bacteria with clinically important antibiotic resistance. The occurrence of such bacteria in wildlife is influenced by various biological, ecological, and geographical factors which have not yet been fully understood. More research focusing on the human-animal-environmental interface and using novel approaches is required to understand the role of wild animals in the transmission of antibiotic resistance and to assess potential risks for the public health.


Asunto(s)
Animales Salvajes/microbiología , Antibacterianos/farmacología , Animales , Bacterias/efectos de los fármacos , Bacterias/enzimología , Bacterias/genética , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Farmacorresistencia Bacteriana , Humanos , Pruebas de Sensibilidad Microbiana , beta-Lactamasas/genética , beta-Lactamasas/metabolismo
7.
Artículo en Inglés | MEDLINE | ID: mdl-31307988

RESUMEN

The gene mcr-1 conferring resistance to last-line antibiotic colistin has been reported globally. Here, we describe the first detection of plasmid-mediated colistin resistance in Russian wildlife, an isolate of Escherichia coli sequence type 2280 from a black kite (Milvus migrans) scavenging raptor. Whole-genome sequencing and plasmid transferability experiments revealed that mcr-1.1 was located on conjugative IncI2 plasmid pDR164 (59891 bp). Migratory black kites may contribute to the global spread of mobile colistin resistance.


Asunto(s)
Farmacorresistencia Bacteriana/genética , Infecciones por Escherichia coli/veterinaria , Proteínas de Escherichia coli/genética , Escherichia coli/genética , Rapaces/microbiología , Migración Animal , Animales , Antibacterianos/metabolismo , Antibacterianos/farmacología , Colistina/metabolismo , Colistina/farmacología , Escherichia coli/efectos de los fármacos , Escherichia coli/enzimología , Escherichia coli/aislamiento & purificación , Infecciones por Escherichia coli/epidemiología , Infecciones por Escherichia coli/microbiología , Infecciones por Escherichia coli/transmisión , Pruebas de Sensibilidad Microbiana , Plásmidos/química , Plásmidos/metabolismo , Federación de Rusia/epidemiología , Secuenciación Completa del Genoma
8.
Artículo en Inglés | MEDLINE | ID: mdl-30885899

RESUMEN

The pathogenic extended-spectrum-beta-lactamase (ESBL)-producing Escherichia coli lineage ST648 is increasingly reported from multiple origins. Our study of a large and global ST648 collection from various hosts (87 whole-genome sequences) combining core and accessory genomics with functional analyses and in vivo experiments suggests that ST648 is a nascent and generalist lineage, lacking clear phylogeographic and host association signals. By including large numbers of ST131 (n = 107) and ST10 (n = 96) strains for comparative genomics and phenotypic analysis, we demonstrate that the combination of multidrug resistance and high-level virulence are the hallmarks of ST648, similar to international high-risk clonal lineage ST131. Specifically, our in silico, in vitro, and in vivo results demonstrate that ST648 is well equipped with biofilm-associated features, while ST131 shows sophisticated signatures indicative of adaption to urinary tract infection, potentially conveying individual ecological niche adaptation. In addition, we used a recently developed NFDS (negative frequency-dependent selection) population model suggesting that ST648 will increase significantly in frequency as a cause of bacteremia within the next few years. Also, ESBL plasmids impacting biofilm formation aided in shaping and maintaining ST648 strains to successfully emerge worldwide across different ecologies. Our study contributes to understanding what factors drive the evolution and spread of emerging international high-risk clonal lineages.


Asunto(s)
Farmacorresistencia Bacteriana Múltiple/genética , Escherichia coli/genética , Factores de Virulencia/genética , Virulencia/genética , Animales , Antibacterianos/farmacología , Bacteriemia/tratamiento farmacológico , Bacteriemia/microbiología , Biopelículas/efectos de los fármacos , Pollos/microbiología , Escherichia coli/efectos de los fármacos , Infecciones por Escherichia coli/tratamiento farmacológico , Infecciones por Escherichia coli/microbiología , Genómica/métodos , Humanos , Tipificación de Secuencias Multilocus/métodos , Plásmidos/genética , Infecciones Urinarias/tratamiento farmacológico , Infecciones Urinarias/microbiología , Secuenciación Completa del Genoma/métodos , beta-Lactamasas/genética
9.
PLoS Genet ; 12(9): e1006280, 2016 09.
Artículo en Inglés | MEDLINE | ID: mdl-27618184

RESUMEN

The use of whole-genome phylogenetic analysis has revolutionized our understanding of the evolution and spread of many important bacterial pathogens due to the high resolution view it provides. However, the majority of such analyses do not consider the potential role of accessory genes when inferring evolutionary trajectories. Moreover, the recently discovered importance of the switching of gene regulatory elements suggests that an exhaustive analysis, combining information from core and accessory genes with regulatory elements could provide unparalleled detail of the evolution of a bacterial population. Here we demonstrate this principle by applying it to a worldwide multi-host sample of the important pathogenic E. coli lineage ST131. Our approach reveals the existence of multiple circulating subtypes of the major drug-resistant clade of ST131 and provides the first ever population level evidence of core genome substitutions in gene regulatory regions associated with the acquisition and maintenance of different accessory genome elements.


Asunto(s)
Farmacorresistencia Microbiana/genética , Infecciones por Escherichia coli/tratamiento farmacológico , Escherichia coli/genética , Evolución Molecular , Escherichia coli/patogenicidad , Infecciones por Escherichia coli/genética , Genoma Bacteriano/efectos de los fármacos , Humanos , Filogenia , Secuencias Reguladoras de Ácidos Nucleicos/genética , Análisis de Secuencia de ADN
10.
Artículo en Inglés | MEDLINE | ID: mdl-30061277

RESUMEN

Escherichia coli sequence type 131 (ST131) is currently one of the leading causes of multidrug-resistant extraintestinal infections globally. Here, we analyzed the phenotypic and genotypic characteristics of 169 ST131 isolates from various sources (wildlife, wastewater, companion animals, community, and hospitals) to determine whether wildlife and the environment share similar strains with humans, supporting transmission of ST131 between different ecological niches. Susceptibility to 32 antimicrobials was tested by disc diffusion and broth microdilution. Antibiotic resistance genes, integrons, plasmid replicons, 52 virulence genes, and fimH-based subtypes were detected by PCR and DNA sequencing. Genomic relatedness was determined by pulsed-field gel electrophoresis (PFGE). The genetic context and plasmid versus chromosomal location of extended-spectrum beta-lactamase and AmpC beta-lactamase genes was determined by PCR and probe hybridization, respectively. The 169 ST131 study isolates segregated predominantly into blaCTX-M-15H30Rx (60%) and blaCTX-M-27H30R1 (25%) subclones. Within each subclone, isolates from different source groups were categorized into distinct PFGE clusters; genotypic characteristics were fairly well conserved within each major PFGE cluster. Irrespective of source, the blaCTX-M-15H30Rx isolates typically exhibited virotype A (89%), an F2:A1:B- replicon (84%), and a 1.7-kb class 1 integron (92%) and had diverse structures upstream of the blaCTX-M region. In contrast, the blaCTX-M-27H30R1 isolates typically exhibited virotype C (86%), an F1:A2:B20 replicon (76%), and a conserved IS26-ΔISEcp1-blaCTX-M-like structure. Despite considerable overall genetic diversity, our data demonstrate significant commonality between E. coli ST131 isolates from diverse environments, supporting transmission between different sources, including humans, environment, and wildlife.


Asunto(s)
Escherichia coli/genética , beta-Lactamasas/genética , Animales , Antibacterianos/farmacología , Infecciones Comunitarias Adquiridas/genética , Infecciones Comunitarias Adquiridas/microbiología , Farmacorresistencia Bacteriana Múltiple/genética , Electroforesis en Gel de Campo Pulsado , Escherichia coli/efectos de los fármacos , Infecciones por Escherichia coli/genética , Infecciones por Escherichia coli/microbiología , Proteínas de Escherichia coli/genética , Humanos , Plásmidos/genética
11.
Folia Parasitol (Praha) ; 652018 Nov 12.
Artículo en Inglés | MEDLINE | ID: mdl-30482889

RESUMEN

The chiggers (Acari: Trombiculidae) Blankaartia sinnamaryi (Floch et Fauran, 1956), Parasecia soucouyanti (Brennan et Yunker, 1966), Eutrombicula lipovskyana (Wolfenbarger, 1952) and Neoschoengastia dalmati Brennan, 1951 were found in Honduras on a total of twelve bird species. Parasecia soucouyanti was recorded parasitising birds for the first time. All these mites are here reported from Honduras for the first time.


Asunto(s)
Enfermedades de las Aves/epidemiología , Aves , Infestaciones por Ácaros/veterinaria , Trombiculidae/fisiología , Animales , Enfermedades de las Aves/parasitología , Honduras/epidemiología , Larva/fisiología , Infestaciones por Ácaros/epidemiología , Infestaciones por Ácaros/prevención & control , Prevalencia , Trombiculidae/crecimiento & desarrollo
12.
Environ Microbiol ; 19(5): 2025-2036, 2017 05.
Artículo en Inglés | MEDLINE | ID: mdl-28276133

RESUMEN

American crow (Corvus brachyrhynchos) faeces were tested for Escherichia coli with plasmid-mediated quinolone resistance (PMQR), extended-spectrum beta-lactamases (ESBL) and AmpC beta-lactamases. A total of 590 faecal samples were collected at four roosting sites in the USA and cultivated on selective media. Pulsed-field gel electrophoresis (PFGE) and multi-locus sequence typing (MLST) were performed to assess clonality. Transferability of resistance genes was studied using conjugation and transformation bioassays. In total, 78 (13%, n = 590) cefotaxime-resistant isolates were obtained, of which 66 and 12 displayed AmpC and ESBL phenotypes, respectively. Fifty-four AmpC-producing isolates carried blaCMY-2 . Isolates producing ESBLs contained genes blaCTX-M-27 (5 isolates), blaCTX-M-15 (4), blaCTX-M-14 (2) and blaCTX-M-1 (1). Ninety isolates (15%, n = 590) with reduced susceptibility to ciprofloxacin were obtained, among which 14 harboured PMQR genes aac(6')-Ib-cr (4 isolates), qnrB19 (3), qnrS1 (2), qnrA1 (2), qnrB2 (1), qnrB6 (1) and qnrD3 (1). High genetic diversity was revealed by PFGE and MLST. Epidemiologically important E. coli clones (e.g., ST131, ST405) were identified. Plasmids carrying blaCMY-2 were assigned predominantly to IncA/C (8 plasmids), IncI1/ST23 (5) and IncI1/ST12 (3). The study demonstrates a widespread occurrence of E. coli with ESBL, AmpC and PMQR genes associated with clinically important multidrug-resistant clones and epidemic plasmids, in American crows.


Asunto(s)
Proteínas Bacterianas/genética , Cefotaxima/farmacología , Ciprofloxacina/farmacología , Cuervos/microbiología , Proteínas de Escherichia coli/genética , Escherichia coli/efectos de los fármacos , Escherichia coli/genética , beta-Lactamasas/genética , Animales , Antibacterianos , Enfermedades de las Aves/microbiología , Electroforesis en Gel de Campo Pulsado , Infecciones por Escherichia coli , Humanos , Pruebas de Sensibilidad Microbiana , Tipificación de Secuencias Multilocus , Plásmidos/genética , Estados Unidos
13.
J Antimicrob Chemother ; 71(1): 63-70, 2016 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-26472769

RESUMEN

OBJECTIVES: The objective of this study was to investigate the silver gull as an indicator of environmental contamination by salmonellae and carbapenemase-producing Enterobacteriaceae (CPE) in south-east Australia. METHODS: A total of 504 cloacal samples were collected from gull chicks at three nesting colonies in New South Wales, Australia [White Bay (n = 144), Five Islands (n = 200) and Montague Island (n = 160)] and were examined for salmonellae and CPE. Isolates were tested for carbapenemase genes and susceptibility to 14 antibiotics. Clonality was determined by PFGE and MLST. Genetic context and conjugative transfer of the carbapenemase gene were determined. RESULTS: A total of 120 CPE of 10 species, mainly Escherichia coli (n = 85), carrying the gene blaIMP-4, blaIMP-38 or blaIMP-26 were obtained from 80 (40%) gulls from Five Islands. Thirty percent of birds from this colony were colonized by salmonellae. Most isolates contained the gene within a class 1 integron showing a blaIMP-4-qacG-aacA4-catB3 array. The blaIMP gene was carried by conjugative plasmids of variable sizes (80-400 kb) and diverse replicons, including HI2-N (n = 30), HI2 (11), A/C (17), A/C-Y (2), L/M (5), I1 (1) and non-typeable (6). Despite the overall high genetic variability, common clones and plasmid types were shared by different birds and bacterial isolates, respectively. CONCLUSIONS: Our data demonstrate a large-scale transmission of carbapenemase-producing bacteria into wildlife, likely as a result of the feeding habits of the birds at a local waste depot. The isolates from gulls showed significant similarities with clinical isolates from Australia, suggesting the human origin of the isolates. The sources of CPE for gulls on Five Islands should be explored and proper measures applied to stop the transmission into the environment.


Asunto(s)
Proteínas Bacterianas/análisis , Enfermedades de las Aves/epidemiología , Enfermedades de las Aves/microbiología , Charadriiformes/microbiología , Infecciones por Enterobacteriaceae/veterinaria , Enterobacteriaceae/enzimología , Enterobacteriaceae/aislamiento & purificación , beta-Lactamasas/análisis , Animales , Antibacterianos/farmacología , Proteínas Bacterianas/genética , Aves , Cloaca/microbiología , Infecciones por Enterobacteriaceae/epidemiología , Infecciones por Enterobacteriaceae/microbiología , Genotipo , Humanos , Islas/epidemiología , Pruebas de Sensibilidad Microbiana , Epidemiología Molecular , Tipificación Molecular , Nueva Gales del Sur/epidemiología , Prevalencia , beta-Lactamasas/genética
14.
Parasitol Res ; 115(5): 2011-6, 2016 May.
Artículo en Inglés | MEDLINE | ID: mdl-26847630

RESUMEN

Wild birds are common hosts of ticks and can transport them for long distances, contributing to the spreading of tick-borne pathogens. The information about ticks on birds and tick-borne pathogens in Greece is limited. The present study aimed to evaluate the prevalence and species of ticks infesting wild resident birds (mostly small passerines) in Greece, and to assess Borrelia and Rickettsia infection in the collected ticks. Detection of Borrelia burgdorferi s.l. was performed by nested PCR targeting the flaB gene. Rickettsia spp. were detected by PCR targeting the gltA and ompA genes. Seven (2 %) out of 403 birds examined in northern Greece in 2013 were infested with 15 ticks, identified as Ixodes frontalis, Ixodes acuminatus, Hyalomma marginatum, Hyalomma aegyptium and Hyalomma sp. All ticks were negative for Borrelia spp. while four of them were positive for rickettsiae (Rickettsia aeschlimannii in H. aegyptium and Rickettsia sp. in I. frontalis, H. aegyptium and H. marginatum). Ixodes acuminatus is reported for the first time in Greece and Sylvia borin is reported as a new host record for I. acuminatus.


Asunto(s)
Animales Salvajes , Enfermedades de las Aves/parasitología , Borrelia/aislamiento & purificación , Ixodidae/microbiología , Rickettsia/aislamiento & purificación , Infestaciones por Garrapatas/veterinaria , Animales , Enfermedades de las Aves/epidemiología , Enfermedades de las Aves/microbiología , Aves , Grecia/epidemiología , Passeriformes , Infestaciones por Garrapatas/epidemiología , Infestaciones por Garrapatas/parasitología
15.
Appl Environ Microbiol ; 81(2): 648-57, 2015 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-25381245

RESUMEN

Extended-spectrum-beta-lactamase (ESBL)-producing, AmpC beta-lactamase-producing, and plasmid-mediated quinolone resistance (PMQR) gene-positive strains of Escherichia coli were investigated in wintering rooks (Corvus frugilegus) from eight European countries. Fecal samples (n = 1,073) from rooks wintering in the Czech Republic, France, Germany, Italy, Poland, Serbia, Spain, and Switzerland were examined. Resistant isolates obtained from selective cultivation were screened for ESBL, AmpC, and PMQR genes by PCR and sequencing. Pulsed-field gel electrophoresis and multilocus sequence typing were performed to reveal their clonal relatedness. In total, from the 1,073 samples, 152 (14%) cefotaxime-resistant E. coli isolates and 355 (33%) E. coli isolates with reduced susceptibility to ciprofloxacin were found. Eighty-two (54%) of these cefotaxime-resistant E. coli isolates carried the following ESBL genes: blaCTX-M-1 (n = 39 isolates), blaCTX-M-15 (n = 25), blaCTX-M-24 (n = 4), blaTEM-52 (n = 4), blaCTX-M-14 (n = 2), blaCTX-M-55 (n = 2), blaSHV-12 (n = 2), blaCTX-M-8 (n = 1), blaCTX-M-25 (n = 1), blaCTX-M-28 (n = 1), and an unspecified gene (n = 1). Forty-seven (31%) cefotaxime-resistant E. coli isolates carried the blaCMY-2 AmpC beta-lactamase gene. Sixty-two (17%) of the E. coli isolates with reduced susceptibility to ciprofloxacin were positive for the PMQR genes qnrS1 (n = 54), qnrB19 (n = 4), qnrS1 and qnrB19 (n = 2), qnrS2 (n = 1), and aac(6')-Ib-cr (n = 1). Eleven isolates from the Czech Republic (n = 8) and Serbia (n = 3) were identified to be CTX-M-15-producing E. coli clone B2-O25b-ST131 isolates. Ninety-one different sequence types (STs) among 191 ESBL-producing, AmpC-producing, and PMQR gene-positive E. coli isolates were determined, with ST58 (n = 15), ST10 (n = 14), and ST131 (n = 12) predominating. The widespread occurrence of highly diverse ESBL- and AmpC-producing and PMQR gene-positive E. coli isolates, including the clinically important multiresistant ST69, ST95, ST117, ST131, and ST405 clones, was demonstrated in rooks wintering in various European countries.


Asunto(s)
Antibacterianos/farmacología , Cefalosporinas/farmacología , Cuervos/microbiología , Farmacorresistencia Bacteriana , Escherichia coli/clasificación , Escherichia coli/efectos de los fármacos , Fluoroquinolonas/farmacología , Animales , Electroforesis en Gel de Campo Pulsado , Escherichia coli/genética , Escherichia coli/aislamiento & purificación , Europa (Continente) , Genes Bacterianos , Genotipo , Tipificación de Secuencias Multilocus , Plásmidos , Reacción en Cadena de la Polimerasa
16.
Antonie Van Leeuwenhoek ; 107(5): 1281-9, 2015 May.
Artículo en Inglés | MEDLINE | ID: mdl-25772302

RESUMEN

Coraciiform birds hoopoe (Upupa epops), common kingfisher (Alcedo atthis) and European roller (Coracius garrulus) were examined for enterococci in their cloacae and uropygial glands. The enterococcal isolates were identified at the species level using several genomic and proteomic methods, screened for antibiotic susceptibility and genotyped by pulsed-field gel electrophoresis (PFGE). Clonality of isolates from the common kingfisher was also assessed by multi-locus sequence typing (MLST). Using selective media, putative enterococcal isolates (n = 117) were recovered from 74% (32 out of a total of 43) of the bird samples and 114 isolates were confirmed as enterococci. Overall, among the total of 6 different species detected, Enterococcus faecalis was dominant (59%) in all three bird species. The second most frequently isolated species was Enterococcus casseliflavus (32%). PFGE revealed great diversity of strains from different bird species and anatomic location. Closely related strains were found only from nestlings from the same nest. No genes conferring resistance to vancomycin (vanA, vanB, vanC1 and van C2/C3) or erythromycin (erm A, ermB and mefA/E) were detected. MLST analysis and eBURST clustering revealed that sequence types of E. faecalis from the common kingfisher were identical to those of isolates found previously in water, chickens, and humans.


Asunto(s)
Biodiversidad , Aves/microbiología , Enterococcus/aislamiento & purificación , Animales , Antibacterianos/farmacología , Electroforesis en Gel de Campo Pulsado , Enterococcus/clasificación , Enterococcus/efectos de los fármacos , Enterococcus/genética , Pruebas de Sensibilidad Microbiana , Datos de Secuencia Molecular , Tipificación de Secuencias Multilocus , Filogenia , Prevalencia
17.
Environ Microbiol ; 16(4): 939-49, 2014 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-23919480

RESUMEN

We studied the vanA-carrying vancomycin-resistant enterococci (VRE) isolated from American crows in the United States during the winter 2011/2012. Faecal samples from crows were cultured selectively for VRE and characterized. Pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing (MLST) were used to examine epidemiological relationships of vanA-containing VRE. Isolates were tested in vitro for their ability to horizontally transfer the vancomycin resistance trait. VRE with the vanA gene were found in 15 (2.5%) of 590 crows samples, from which we obtained 22 different isolates. Enterococcal species were Enterococcus faecium (14) and E. faecalis (8). One, two and 19 isolates originated from Kansas, New York State and Massachusetts, respectively. Based on MLST analysis, E. faecium isolates were grouped as ST18 (6 isolates), ST555 (2), and novel types ST749 (1), ST750 (3), ST751 (1), ST752 (1). Enterococcus faecalis isolates belonged to ST6 (1), ST16 (3) and ST179 (4). All isolates were able to transfer the vancomycin resistance trait via filter mating with very high transfer range. Clinically important enterococci with the vanA gene occur in faeces of wild American crows throughout the United States. These migrating birds may contribute to the dissemination of VRE in environment over large distances. [Correction added after first online publication on 06 August 2013: The number of E. faecium ST752 isolate is now amended to '1', consistent with that shown in the 'Results' section and Figure 2.].


Asunto(s)
Proteínas Bacterianas/genética , Ligasas de Carbono-Oxígeno/genética , Cuervos/microbiología , Enterococcus faecalis/genética , Enterococcus faecium/genética , Resistencia a la Vancomicina/genética , Animales , Enterococcus faecalis/aislamiento & purificación , Enterococcus faecium/aislamiento & purificación , Heces/microbiología , Transferencia de Gen Horizontal , Tipificación de Secuencias Multilocus , Estados Unidos
19.
Parasitol Res ; 113(9): 3211-20, 2014 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-24958271

RESUMEN

Collyriclum faba (Plagiochiida: Collyriclidae) adults occur in pairs within subcutaneous cysts. Here, we tested the extensive C. faba infrapopulation for five DNA loci known to display variability among Central European C. faba individuals. The infrapopulation tested shared 100% similarity in four of the five mitochondrial and nuclear DNA loci tested. Contrariwise, the internal transcribed spacer 1 (ITS1) loci in all but one individual differed from each other. We found only 0.0-1.5 base substitutions per 1,000 sites within the cysts, while we found 0.7-9.0 substitutions between the cysts of the single host and 3.0-9.0 substitutions when comparing C. faba individuals isolated from different host individuals. We observed the most of the ITS1 variability within 48 bp repetitive sequences featured by the chi-like sequence 5'-GCTTGTCTGCC-3' at their beginning. Similarly to the extensive C. faba infrapopulation examined, we determined the presence of highly variable number of repetitive sequences within the ITS1 locus of C. faba isolated from multiple host species and from various geographic locations. While similar variability was observed earlier in mutually unrelated specimens of several Schistosomatidae and Microphallidae species, here, we for the first time document it among multiple individuals of a single infracommunity possessing single mitochondrial haplotype. Lower ITS1 evolutionary divergence rates observed between individuals within the cysts when compared to those between the cysts suggest that the recombination occurs at multiple stages of the life cycle. We propose DNA recombination involving chi-like sequences to serve as a general feature shared by multiple families of digenetic trematodes to increase genetic diversity of their polyembryonic populations infecting their definitive hosts.


Asunto(s)
ADN de Helmintos/genética , ADN Intergénico/genética , Trematodos/genética , Animales , Secuencia de Bases , Enfermedades de las Aves/parasitología , Regulación de la Expresión Génica , Variación Genética , Masculino , Datos de Secuencia Molecular , Secuencias Repetitivas de Ácidos Nucleicos , Golondrinas , Trematodos/embriología , Infecciones por Trematodos/parasitología , Infecciones por Trematodos/veterinaria
20.
Parasite ; 31: 8, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38334688

RESUMEN

A total of 1,621 wild birds representing 34 species were examined for chewing lice in reed beds in southwestern Slovakia during the pre-breeding migration 2008-2009 and 2016-2019. A total of 377 (23.3%) birds representing 15 species were parasitized by 26 species of chewing lice of 12 genera. Dominant genera were Penenirmus (with dominance 32.6%) and Menacanthus (29.4%), followed by Brueelia (12.6%), Acronirmus (10.8%), Philopterus (7.7%), and Myrsidea (4.2%). We evaluated 33 host-louse associations including both 1) host-generalist, parasitizing more than one host species and host-specific lice, occurring only on a single host species, and 2) lice species with large range geographic distribution, reported across the range of the distribution of their hosts and lice species with only occasional records from a limited area within the range of their hosts. The Bearded Reedling, Panurus biarmicus (Linnaeus, 1758), was parasitized by two species of chewing lice, Menacanthus brelihi Balát, 1981 and Penenirmus visendus (Zlotorzycka, 1964), with conspicuously different prevalences (5.6% vs. 58.2%, respectively; n = 251). New material enabled us to redescribe both species of lice: the first one is resurrected from previous synonymy as a valid species. A fragment of the mitochondrial cytochrome oxidase I gene was sequenced from these two species in order to assess their relative phylogenetic position within their genera. Our study demonstrates the importance of an adequate identification of parasites, especially on rarely examined and endangered hosts.


Title: Mallophages de la Panure à moustaches (Panurus biarmicus) et diversité des associations mallophages-hôtes des oiseaux dans les roselières en Slovaquie. Abstract: Au total, 1 621 oiseaux sauvages représentant 34 espèces ont été examinés à la recherche de mallophages dans les roselières du sud-ouest de la Slovaquie au cours de la migration de pré-reproduction 2008­2009 et 2016­2019. Parmi ceux-ci, 377 oiseaux (23,3 %), représentant 15 espèces, étaient parasités par 26 espèces de mallophages de 12 genres. Les genres dominants étaient Penenirmus (avec une dominance de 32,6 %) et Menacanthus (29,4 %), suivis de Brueelia (12,6 %), Acronirmus (10,8 %), Philopterus (7,7 %) et Myrsidea (4,2 %). Nous avons évalué 33 associations mallophage-hôte comprenant à la fois 1) des espèces de mallophages généralistes, parasitant plus d'une espèce hôte, et des mallophages spécifiques, présents uniquement sur une seule espèce hôte et 2) des espèces de mallophages ayant une large répartition géographique, signalées à travers l'étendue de la répartition de leurs hôtes, et des espèces de mallophages avec seulement des observations occasionnelles dans une zone limitée à l'intérieur de l'aire de répartition de leurs hôtes. La Panure à moustaches, Panurus biarmicus (Linnaeus, 1758), était parasitée par deux espèces de mallophages, Menacanthus brelihi Balát, 1981 et Penenirmus visendus (Zlotorzycka, 1964), avec des prévalences nettement différentes (respectivement 5,6 % et 58,2 %, n = 251). Du nouveau matériel nous a permis de redécrire les deux espèces de mallophages, la première étant ressuscitée de la synonymie précédente en tant qu'espèce valide. Un fragment du gène mitochondrial de la cytochrome oxydase I a été séquencé à partir de ces deux espèces afin d'évaluer leur position phylogénétique relative au sein de leurs genres. Notre étude démontre l'importance d'une identification adéquate des parasites, en particulier sur les hôtes rarement examinés et menacés.


Asunto(s)
Amblycera , Enfermedades de las Aves , Ischnocera , Infestaciones por Piojos , Passeriformes , Animales , Infestaciones por Piojos/epidemiología , Infestaciones por Piojos/veterinaria , Infestaciones por Piojos/parasitología , Filogenia , Eslovaquia/epidemiología , Enfermedades de las Aves/epidemiología , Enfermedades de las Aves/parasitología , Passeriformes/parasitología
SELECCIÓN DE REFERENCIAS
DETALLE DE LA BÚSQUEDA