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1.
Mol Biol Evol ; 39(1)2022 01 07.
Artículo en Inglés | MEDLINE | ID: mdl-34730826

RESUMEN

Colonization of land from marine environments was a major transition for biological life on Earth, and intertidal adaptation was a key evolutionary event in the transition from marine- to land-based lifestyles. Multicellular intertidal red algae exhibit the earliest, systematic, and successful adaptation to intertidal environments, with Porphyra sensu lato (Bangiales, Rhodophyta) being a typical example. Here, a chromosome-level 49.67 Mb genome for Neoporphyra haitanensis comprising 9,496 gene loci is described based on metagenome-Hi-C-assisted whole-genome assembly, which allowed the isolation of epiphytic bacterial genome sequences from a seaweed genome for the first time. The compact, function-rich N. haitanensis genome revealed that ancestral lineages of red algae share common horizontal gene transfer events and close relationships with epiphytic bacterial populations. Specifically, the ancestor of N. haitanensis obtained unique lipoxygenase family genes from bacteria for complex chemical defense, carbonic anhydrases for survival in shell-borne conchocelis lifestyle stages, and numerous genes involved in stress tolerance. Combined proteomic, transcriptomic, and metabolomic analyses revealed complex regulation of rapid responses to intertidal dehydration/rehydration cycling within N. haitanensis. These adaptations include rapid regulation of its photosynthetic system, a readily available capacity to utilize ribosomal stores, increased methylation activity to rapidly synthesize proteins, and a strong anti-oxidation system to dissipate excess redox energy upon exposure to air. These novel insights into the unique adaptations of red algae to intertidal lifestyles inform our understanding of adaptations to intertidal ecosystems and the unique evolutionary steps required for intertidal colonization by biological life.


Asunto(s)
Proteómica , Rhodophyta , Aclimatación/genética , Adaptación Fisiológica/genética , Ecosistema , Rhodophyta/genética
2.
BMC Plant Biol ; 22(1): 168, 2022 Apr 04.
Artículo en Inglés | MEDLINE | ID: mdl-35369869

RESUMEN

BACKGROUND: Seaweeds in the upper intertidal zone experience extreme desiccation during low tide, followed by rapid rehydration during high tide. Porphyra sensu lato are typical upper intertidal seaweeds. Therefore, it is valuable to investigate the adaptive mechanisms of seaweed in response to dehydration-rehydration stress. RESULTS: A reduction in photosynthetic capacity and cell shrinkage were observed when N. haitanensis was dehydrated, and such changes were ameliorated once rehydrated. And the rate and extent of rehydration were affected by the air flow speed, water content before rehydration, and storage temperature and time. Rapid dehydration at high air-flow speed and storage at - 20 °C with water content of 10% caused less damage to N. haitanensis and better-protected cell activity. Moreover, proteomic and metabolomic analyses revealed the abundance members of the differentially expressed proteins (DEPs) and differentially abundant metabolites (DAMs) mainly involved in antioxidant system and osmotic regulation. The ascorbic acid-glutathione coupled with polyamine antioxidant system was enhanced in the dehydration response of N. haitanensis. The increased soluble sugar content, the accumulated polyols, but hardly changed (iso)floridoside and insignificant amount of sucrose during dehydration indicated that polyols as energetically cheaper organic osmolytes might help resist desiccation. Interestingly, the recovery of DAMs and DEPs upon rehydration was fast. CONCLUSIONS: Our research results revealed that rapid dehydration and storage at - 20 °C were beneficial for recovery of N. haitanensis. And the strategy to resist dehydration was strongly directed toward antioxidant activation and osmotic regulation. This work provided valuable insights into physiological changes and adaptative mechanism in desiccation, which can be applied for seaweed farming.


Asunto(s)
Deshidratación , Rhodophyta , Fluidoterapia , Fotosíntesis/fisiología , Proteómica , Rhodophyta/fisiología
3.
BMC Plant Biol ; 22(1): 114, 2022 Mar 14.
Artículo en Inglés | MEDLINE | ID: mdl-35287582

RESUMEN

BACKGROUND: Red algae Porphyra sensu lato grow naturally in the unfavorable intertidal environment, in which they are exposed to substantial temperature fluctuations. The strategies of Porphyra to tolerate cold stress are poorly understood. RESULTS: Herein, investigations revealed that chilling and freezing induced alterations in the physiological properties, gene transcriptional profiles and metabolite levels in the economically important red algae species, Neoporphyra haitanensis. Control samples (kept at 20 °C) were compared to chilled thalli (10 and 4 °C) and to thalli under - 4 °C conditions. Chilling stress did not affect the health or photosynthetic efficiency of gametophytes, but freezing conditions resulted in the arrest of growth, death of some cells and a decrease in photosynthetic activity as calculated by Fv/Fm. Transcriptome sequencing analysis revealed that the photosynthetic system was down-regulated along with genes associated with carbon fixation and primary metabolic biosynthesis. Adaptive mechanisms included an increase in unsaturated fatty acids levels to improve membrane fluidity, an increase in floridoside and isofloridoside content to enhance osmotic resistance, and an elevation in levels of some resistance-associated phytohormones (abscisic acid, salicylic acid, and methyl jasmonic acid). These physiochemical alterations occurred together with the upregulation of ribosome biogenesis. CONCLUSIONS: N. haitanensis adopts multiple protective mechanisms to maintain homeostasis of cellular physiology in tolerance to cold stress.


Asunto(s)
Respuesta al Choque por Frío , Rhodophyta , Frío , Perfilación de la Expresión Génica , Fotosíntesis , Rhodophyta/metabolismo
4.
Pharmacol Res ; 165: 105417, 2021 03.
Artículo en Inglés | MEDLINE | ID: mdl-33401003

RESUMEN

Carrageenan (CGN) is a common food additive, and questions have been raised regarding its safety for human consumption. The purpose of this study was to investigate the impact of κ-CGN on glucose intolerance and insulin resistance from the perspective that κ-CGN may interfere with insulin receptor function and affect insulin sensitivity and signaling, thereby leading to body weight loss. The health effects of κ-CGN on C57BL/6 mice were assessed over a 90-d period by monitoring changes in body weight, glucose tolerance, insulin tolerance, fasting glucose and insulin levels, and expression of insulin-pathway-related proteins. Furthermore, HepG2 cells were used to detect the binding of κ-CGN on insulin receptor and measure its effect on downstream signal transduction. In mice, κ-CGN treatment reduced weight gain without affecting food intake. Glucose and insulin tolerance tests revealed that κ-CGN treatment increased blood glucose levels and glycosylated hemoglobin levels, while hepatic and muscle glycogen levels were decreased, suggesting that κ-CGN affected glucose metabolism in mice. Interestingly, κ-CGN treatment did not cause typical diabetic symptoms in mice, as indicated by low levels of fasting and postprandial blood glucose, in addition to normal pancreatic tissue and insulin secretion. The binding studies revealed that κ-CGN could competitively bind to the insulin receptor with FITC-insulin and thereby disrupt PI3K and Akt activation, thus suppressing expression of glucose transporters and glycogen synthase. In summary, this study revealed that κ-CGN reduced weight gain without affecting food intake, but impaired glucose metabolism in mice by interfering with insulin binding to receptors, thereby affecting the sensitivity of insulin and inhibiting the insulin PI3K/AKT signaling pathway, causing non-diabetic weight gain reduction.


Asunto(s)
Carragenina/efectos adversos , Antagonistas de Insulina/efectos adversos , Insulina/metabolismo , Enfermedades Metabólicas/inducido químicamente , Animales , Western Blotting , Citometría de Flujo , Glucosa/metabolismo , Células Hep G2 , Humanos , Masculino , Ratones , Ratones Endogámicos C57BL , Fosfatidilinositol 3-Quinasas/metabolismo , Proteínas Proto-Oncogénicas c-akt/metabolismo , Reacción en Cadena en Tiempo Real de la Polimerasa , Transducción de Señal/efectos de los fármacos , Aumento de Peso/efectos de los fármacos
5.
BMC Plant Biol ; 19(1): 37, 2019 Jan 22.
Artículo en Inglés | MEDLINE | ID: mdl-30669983

RESUMEN

BACKGROUND: Short chain oxylipins in plants as the main volatile organic carbon have been speculated to playing an important role for plant innate immunity, however, not yet intensively studied and far away established as the fully recognized algae defense signals. RESULTS: The production of 1-octen-3-ol is self-amplified via the fatty acid-oxylipin metabolic cycle through positive feedback loop. Production of 1-octen-3-ol may act as a messenger that induces P. haitanensis to be in a "primed" state and ready for defense by upregulating the synthesis of methyl jasmonic acid, indole-3-acetic acid, and gibberellin A3. Production of these oxylipins also adjust the redox state in cells, resulting in host defense activation. CONCLUSIONS: We provide the first demonstration that 1-octen-3-ol from P. haitanensis, can act as a self-stimulating community messenger. The multiple effects of 1-octen-3-ol may explain why P. haitanensis, a very ancient lineage within plant kingdom, thrives in the niche of intertidal zones.


Asunto(s)
Octanoles/metabolismo , Oxilipinas/metabolismo , Rhodophyta/metabolismo , Transducción de Señal , Bacterias/metabolismo , Ácidos Grasos no Esterificados/metabolismo , Expresión Génica , Metabolismo de los Lípidos , Lipooxigenasa/genética , Lipooxigenasa/metabolismo , Oxidación-Reducción , Fosfolipasas/metabolismo , Rhodophyta/genética , Rhodophyta/inmunología , Rhodophyta/microbiología
6.
BMC Plant Biol ; 19(1): 325, 2019 Jul 19.
Artículo en Inglés | MEDLINE | ID: mdl-31324146

RESUMEN

BACKGROUND: The heteroside floridoside is a primary photosynthetic product that is known to contribute to osmotic acclimation in almost all orders of Rhodophyta. However, the encoding genes and enzymes responsible for the synthesis of floridoside and its isomeric form, L- or D-isofloridoside, are poorly studied. RESULTS: Here, four putative trehalose-6-phosphate synthase (TPS) genes, designated as PhTPS1, PhTPS2, PhTPS3, and PhTPS4, were cloned and characterized from the red alga Pyropia haitanensis (Bangiophyceae). The deduced amino acid sequence is similar to the annotated TPS proteins of other organisms, especially the UDP-galactose substrate binding sites of PhTPS1, 2, which are highly conserved. Of these, PhTPS1, 4 are involved in the biosynthesis of floridoside and isofloridoside, with isofloridoside being the main product. PhTPS3 is an isofloridoside phosphate synthase, while PhTPS2 exhibits no activity. When challenged by desiccation, high temperature, and salt stress, PhTPS members were expressed to different degrees, but the responses to thermal stress and desiccation were stronger. CONCLUSIONS: Thus, in P. haitanensis, PhTPSs encode the enzymatical activity of floridoside and isofloridoside phosphate synthase and are crucial for the abiotic stress defense response.


Asunto(s)
Proteínas Algáceas/metabolismo , Glucosiltransferasas/metabolismo , Glicerol/análogos & derivados , Rhodophyta/fisiología , Trehalosa/biosíntesis , Proteínas Algáceas/genética , Proteínas Algáceas/fisiología , Glucosiltransferasas/genética , Glicerol/metabolismo , Filogenia , Rhodophyta/enzimología , Rhodophyta/genética , Rhodophyta/metabolismo , Alineación de Secuencia , Estrés Fisiológico
7.
Mar Drugs ; 15(8)2017 Aug 19.
Artículo en Inglés | MEDLINE | ID: mdl-28825620

RESUMEN

Abstract: A new cyclopentenone, 5-hydroxycyclopeni cillone (1), was isolated together with three known compounds, ar-turmerone (2), citreoisocoumarin (3), and 6-O-methyl-citreoisocoumarin (4), from a culture of the sponge-derived fungus Trichoderma sp. HPQJ-34. The structures of 1-4 were characterized using comprehensive spectroscopic analyses. The absolute configuration of 1 was determined by comparison of electronic circular dichroism (ECD) spectra with literature values used for the reported analogue, cyclopenicillone (5), which was not isolated in this research. Compound 1 was shown to scavenge 2,2-diphenyl-1-picrylhydrazyl free radicals, and decrease ß-amyloid (Aß) fibrillization in vitro. Moreover, 1 significantly reduced H2O2-induced neurotoxicity in SH-SY5Y cells. These findings suggested that compound 1, a newly discovered cyclopentenone, has moderate anti-oxidative, anti-Aß fibrillization properties and neuroprotective effects, and might be a good free radical scavenger.


Asunto(s)
Amiloide/efectos de los fármacos , Compuestos de Bifenilo/química , Ciclopentanos/farmacología , Depuradores de Radicales Libres/farmacología , Picratos/química , Poríferos/microbiología , Trichoderma , Animales , Línea Celular/efectos de los fármacos , Dicroismo Circular , Ciclopentanos/química , Depuradores de Radicales Libres/química , Humanos , Fitoterapia
8.
J Phycol ; 51(2): 321-31, 2015 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-26986527

RESUMEN

Glycerol-3-phosphate (G3P) has been suggested as a novel regulator of plant defense signaling, however, its role in algal resistance remains largely unknown. The glycerol kinase (also designated as NHO1) and NAD-dependent G3P dehydrogenase (GPDH) are two key enzymes involved in the G3P biosynthesis. In our study, we cloned the full-length cDNA of NHO1 (NHO1Ph ) and GPDH (GPDHP h ) from the red alga Pyropia haitanensis (denoted as NHO1Ph and GPDHP h ) and examined their expression level under flagellin peptide 22 (flg22) stimulation or heat stress. We also measured the level of G3P and floridoside (a downstream product of G3P in P. haitanensis) under flg22 stimulation or heat stress. Both NHO1Ph and GPDHP h shared high sequence identity and structural conservation with their orthologs from different species, especially from red algae. Phylogenetic analysis showed that NHO1s and GPDHs from red algae were closely related to those from animals. Under flg22 stimulation or heat stress, the expression levels of NHO1Ph and GPDHP h were up-regulated, G3P levels increased, and the contents of floridoside decreased. But the floridoside level increased in the recovery period after heat stress. Taken together, we found that G3P metabolism was associated with the flg22-induced defense response and heat stress response in P. haitanensis, indicating the general conservation of defense response in angiosperms and algae. Furthermore, floridoside might also participate in the stress resistance of P. haitanensis.

9.
Molecules ; 20(4): 7048-58, 2015 Apr 20.
Artículo en Inglés | MEDLINE | ID: mdl-25903362

RESUMEN

Lignans, which are recognized as main constituents in Justicia procumbens, have attracted considerable attention due to their pharmacological activities, including antitumor, anti-hepatitic, cytotoxic, anti-microbial, and anti-virus properties. Preparative high-speed counter-current chromatography (HSCCC) was successfully applied to the isolation and purification of four lignans (justicidin B (1), justicidin A (2), 6'-hydroxyjusticidin C (3) and lignan J1 (4)) from J. procumbens using stepwise elution with a pair of two-phase solvent systems composed of n-hexane-ethyl acetate-methanol-water at (1.3:1:1.3:1, v/v) and (2.5:1:2.5:1, v/v). The preparative HSCCC separation was performed on 300 mg of crude sample yielding compounds 1 (19.7 mg), 2 (9.86 mg), 3 (11.26 mg), and 4 (2.54 mg) in a one-step separation, with purities over 95% as determined by HPLC. The structures of these compounds were identified by MS, 1H-NMR and 13C-NMR. This is the first report on the application of HSCCC to the efficient separation of lignans from J. procumbens.


Asunto(s)
Distribución en Contracorriente/métodos , Género Justicia/química , Lignanos/química , Lignanos/aislamiento & purificación , Cromatografía Líquida de Alta Presión , Estructura Molecular
10.
Front Plant Sci ; 15: 1379428, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38533401

RESUMEN

The Bangiales represent an ancient lineage within red algae that are characterized by a life history featuring a special transitional stage from diploid to haploid known as the conchosporangia stage. However, the regulatory mechanisms governing the initiation of this stage by changes in environmental conditions are not well understood. This study analyzed the changes in phytohormones and H2O2 content during the development of conchosporangia. It also compared the gene expression changes in the early development of conchosporangia through transcriptome analysis. The findings revealed that H2O2 was shown to be the key signal initiating the transition from conchocelis to conchosporangia in Pyropia haitanensis. Phytohormone analysis showed a significant increase in 1-aminocylopropane-1-carboxylic acid (ACC) levels during conchosporangia maturation, while changes in environmental conditions were found to promote the rapid release of H2O2. H2O2 induction led to conchosporangia development, and ACC enhanced both H2O2 production and conchosporangia development. This promotive effect was inhibited by the NADPH oxidase inhibitor diphenylene iodonium and the H2O2 scavenger N, N'-dimethylthiourea. The balance of oxidative-antioxidative mechanisms was maintained by regulating the activities and transcriptional levels of enzymes involved in H2O2 production and scavenging. Transcriptome analysis in conjunction with evaluation of enzyme and transcription level changes revealed upregulation of protein and sugar synthesis along with modulation of energy supply under the conditions that induced maturation, and exogenous ACC was found to enhance the entire process. Overall, this study demonstrates that ACC enhances H2O2 promotion of the life cycle switch responsible for the transition from a vegetative conchocelis to a meiosis-preceding conchosporangia stage in Bangiales species.

11.
Wei Sheng Wu Xue Bao ; 53(10): 1087-102, 2013 Oct 04.
Artículo en Zh | MEDLINE | ID: mdl-24409765

RESUMEN

OBJECTIVE: Pyropia haitanensis is of great commercial importance and wildly cultivated in Zhejiang and Fujian provinces. To observe the characteristics and changes of phycosphere microbial communities during cultivation can help us monitor the potential pathogens and microbial factors affecting the health of cultivated seaweeds. METHODS: The morphological characteristics and the diversity of phycosphere and surrounding seawater microbes were studied by pure culture method and polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE). Similarity analysis was carried out online with the 16S rDNA (bacteria) and 18S rDNA (fungi) sequences in GenBank. The phycosphere microbial diversity during different growth stages, cultivated areas and periods was studied. RESULTS: Totally 467 bacteria and 55 fungi were isolated during P. haitanensis cultivation. The diversity of fungi was smaller than that of bacteria. The bacteria were classified into 41 genera, belonging to Alphaproteobacteria, Gammaproteobacteria, Actinobacteria, Firmicutes and Bacteroidetes. The dominant bacterial communities were Alphaproteobacteria and Gammaproteobacteria. Most of the fungi were classified into Ascomycota, only one strain belonging to the Basidiomycota, Agaricomycetes. Bacteria of 19 specific genera were isolated from P. haitanensis while 13 specific genera were isolated from the surrounding seawater. Most actinomycetes and fungi were isolated from the conchocelis cultured indoors, which was different from the microbial communities of the thalli in intertidal zone. Within the isolated microbes, we found that some strains had very high similarity with those pathogens such as Cobetia marina (C. marina, P. haitanensis red-rotting disease), Phoma porphyrae (P. yezoensis disease) and saprotrophic fungi Fusarium sp. and Aspergillus sp.. CONCLUSION: The diversity of Pyropia phycoshpere microbes during cultivation was affected by the seaweed morphology, culture time and environmental factors. The strains that shared high similarity with Pyropia pathogens were found in this study, which would cause our great attention to these potential pathogens for Pyropia diseases.


Asunto(s)
Bacterias/aislamiento & purificación , Biodiversidad , Hongos/aislamiento & purificación , Rhodophyta/microbiología , Bacterias/clasificación , Bacterias/genética , Hongos/clasificación , Hongos/genética , Datos de Secuencia Molecular , Filogenia , Rhodophyta/crecimiento & desarrollo
12.
Mol Biotechnol ; 65(8): 1378-1386, 2023 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-36611100

RESUMEN

Sargassum hemiphyllum and Sargassum fusiforme are important benthic seaweeds that grow along the southeastern coast of China. The content of carotenoids in each population was detected by ultra-high performance liquid chromatography (UHPLC). The research results will enrich the theoretical basis and data support concerning the influencing factors of carotenoids in Sargassum. The inter-simple sequence repeat (ISSR) technique was used to study the genetic diversity of four S. hemiphyllum and two S. fusiforme populations, and the results provide a reference for the artificial cultivation of Sargassum. The total carotenoid content of Sargassum ranged from 161.79 ± 4.22 to 269.47 ± 6.15 µg/g. Among the carotenoids, ß-carotene and fucoxanthin accounted for 80%, and levels in S. hemiphyllum were generally higher than those in S. fusiforme. The carotenoid contents of S. hemiphyllum from different areas were significantly different (P < 0.05), and the total carotenoids content decreased toward the southern region. The average heterozygosity H ranged from 0.29 to 0.49, and the Shannon diversity index I ranged from 0.44 to 0.69. The polymorphic loci, genetic diversity, and other indicators of S. hemiphyllum populations were higher than those of S. fusiforme, and the diversity of cultivated populations was not significantly lower. The results showed that the genetic variation of Sargassum is limited, and thus, more sexual reproduction can be attempted in breeding. Considering morphological indicators, genetic diversity indexes, and carotenoid content, S. hemiphyllum appears to have a higher commercial development value.


Asunto(s)
Sargassum , Sargassum/genética , Sargassum/química , Variación Genética , Carotenoides
13.
AMB Express ; 13(1): 128, 2023 Nov 17.
Artículo en Inglés | MEDLINE | ID: mdl-37975935

RESUMEN

Disease is a major concern in Porphyra aquaculture, particularly during the early shell-borne conchocelis (SBC) seedling stage. To explore prevention strategies for Porphyra diseases, this study explored the potential of using oligoagars (OA) and microbial agents (MA) to treat SBC of Neoporphyra haitanensis in an aquaculture environment. The impact of these treatments on the phycosphere microbial community was analyzed, and the resistance of the treated Porphyra conchocelis to the pathogenic bacterium Vibrio mediterranei 117-T6 (which causes yellow spot disease) was tested in the lab. Results showed that OA reduced α-diversity while enriching Rhodobacteriaceae, and MA increased stability and relative abundance of Bacteroidetes (including Flavobacteria). Furthermore, compared to the control group, the abundance of pathogenic microorganisms and virulence functional genes decreased while defense-related functional gene abundance increased significantly in the groups treated with OA and MA. Most importantly, the OA and MA treatments improved resistance to Vm117-T6, with survival rates of 70% (OA) and 80% (MA), compared to 15% in the control group. Overall, the findings suggest that OA and MA treatments have great potential for preventing Porphyra disease, as they improve phycosphere microorganisms and increase algae resistance to pathogenic bacteria.

14.
Zhongguo Zhong Yao Za Zhi ; 37(19): 2898-901, 2012 Oct.
Artículo en Zh | MEDLINE | ID: mdl-23270229

RESUMEN

Chemical constituents in ethyl acetate and butanol fractions of ethanol extracts from Acorus tatarinowii were separated by column chromatography. Bufo skeletal muscle fatigue model was established to study the anti-fatigue activity of separated compounds. Five compounds were separated and identified by spectroscopic analysis as acoramone(1),cycloartenone(2),2,4,5-trimethoxyl-2'-butoxy-1,2-phenyl propandiol(3),5-hydroxymethyl furfural(4), and 5-butoxymethyl furfural(5). Compound 3 was a new compound, and compounds 2 and 5 were separated from this plant for the first time. Compound 4 exhibited a notable anti-fatigue activity.


Asunto(s)
Acorus/química , Extractos Vegetales/química , Extractos Vegetales/farmacología , Animales , Bufonidae , Fatiga/tratamiento farmacológico , Músculo Esquelético/efectos de los fármacos
15.
Polymers (Basel) ; 14(3)2022 Jan 21.
Artículo en Inglés | MEDLINE | ID: mdl-35160426

RESUMEN

Owing to the increasing environmental concerns and requirements for high-quality foods, edible films and coatings (based on proteins, polysaccharides, natural phenolic active substances, etc.) are being developed as effective alternatives to traditional plastic packaging. Gelatin is extracted from collagen. It is an ideal material for food packaging due to its versatile advantages such as low price, polymerization, biodegradability, good antibacterial and antioxidant properties, etc. However, gelatin film exists poor waterproof and mechanical properties, which limit its developments and applications in food packaging. Previous studies show that pure gelatin can be modified by adding active ingredients and incorporating them with bio-polymers to improve its mechanical properties, aiming to achieve the desirable effect of preservation. This review mainly shows the preparation and molding ways of gelatin-based edible films and the applications of gelatin modified with other biopolymers. Furthermore, this review provides the latest advances in gelatin-based biodegradable packaging and food applications that exhibit outstanding advantages in food preservation.

16.
Genes (Basel) ; 13(1)2021 12 23.
Artículo en Inglés | MEDLINE | ID: mdl-35052381

RESUMEN

Chrysotila is a genus of coccolithophores. Together with Emiliania, it is one of the representative genera in the Haptophyta which have been extensively studied. They are photosynthetic unicellular marine algae sharing the common characteristic of the production of CaCO3 platelets (coccoliths) on the surface of their cells and are crucial contributors to global biogeochemical cycles. Here, we report the genome assembly of Chrysotila roscoffensis. The assembled genome size was ~636 Mb distributed across 769 scaffolds with N50 of 1.63 Mb, and maximum contig length of ~2.6 Mb. Repetitive elements accounted for approximately 59% of the genome. A total of 23,341 genes were predicted from C. roscoffensis genome. The divergence time between C. roscoffensis and Emiliania huxleyi was estimated to be around 537.6 Mya. Gene families related to cytoskeleton, cellular motility and morphology, and ion transport were expanded. The genome of C. roscoffensis will provide a foundation for understanding the genetic and phenotypic diversification and calcification mechanisms of coccolithophores.


Asunto(s)
Genoma/genética , Haptophyta/genética , Calcificación Fisiológica/genética , Transporte Iónico/genética , Secuencias Repetitivas de Ácidos Nucleicos/genética
17.
J Photochem Photobiol B ; 194: 76-83, 2019 May.
Artículo en Inglés | MEDLINE | ID: mdl-30933874

RESUMEN

The toxic dinoflagellate Karlodinium veneficum is widely distributed in cosmopolitan estuaries and is responsible for massive fish mortality worldwide. Intraspecific biodiversity is important for the spread to various habitats, interspecific competition to dominate a population, and bloom formation and density maintenance. Strategies for light adaptation may help determine the ecological niches of different ecotypes. However, the mechanism of phenotypic biodiversity is still unclear. In this study, intraspecific differences in genetic regulatory mechanisms in response to varied light intensities and qualities were comparatively researched on two different strains isolated from coastal areas of the East China Sea, namely, GM2 and GM3. In GM2, the expression of genes in the Calvin cycle, namely, rbcL and SBPase, and a light-related gene that correlated with cellular motility, rhodopsin, were significantly inhibited under high light intensities. Thus, this strain was adapted to low light. In contrast, the gene expression levels were promoted by high light conditions in GM3. These upregulated genes in the GM3 strain probably compensated for the negative effects on the maximum quantum yields of PSII (Fv/Fm) under high light stress, which inhibited both strains, enabling GM3 to maintain a constant growth rate. Thus, this strain was adapted to high light. Compared with white light, monochromatic blue light had negative effects on Fv/Fm and the relative electron transfer rate (ETR) in both strains. Under blue light, gene expression levels of rbcL and SBPase in GM2 were inhibited; in contrast, the levels of these genes, especially rbcL, were promoted in GM3. rbcL was significantly upregulated in the blue light groups. Monochromatic red light promoted rhodopsin gene expression in the two strains in a similar manner. These intraspecific diverse responses to light play important roles in the motor characteristics, diel vertical migration, interspecific relationships and photosynthetic or phagotrophic activities of K. veneficum and can determine the population distribution, population maintenance and bloom formation.


Asunto(s)
Dinoflagelados/genética , Dinoflagelados/efectos de la radiación , Regulación de la Expresión Génica/efectos de la radiación , Luz , Dinoflagelados/metabolismo , Relación Dosis-Respuesta en la Radiación , Fotosíntesis/efectos de la radiación , Porfirinas/metabolismo , Rodopsina/genética , Especificidad de la Especie
18.
Harmful Algae ; 49: 50-57, 2015 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-31093028

RESUMEN

The dinoflagellate Prorocentrum donghaiense is a dominant harmful algal bloom (HAB) species on the East China Sea (ECS) coast. The co-occurrence of Karlodinium veneficum with P. donghaiense is often observed and can later develop into dense blooms. However, the role of K. veneficum in P. donghaiense population dynamics is unknown. In the current study, three K. veneficum (GM1, GM2, and GM3) strains were isolated from the ECS with one (GM1) from a mixed, dense bloom of P. donghaiense and other HAB species. All three isolates had identical ITS sequences that were concordant with the species designation. Unique karlotoxin congeners were isolated from one strain (GM2). The sterol compositions of P. donghaiense and K. veneficum were consistent with sensitivity to karlotoxin in the former and insensitivity in the latter. Additional experimentation showed that: (1)in monocultures, higher growth rate of P. donghaiense than K. veneficum is observed in nutrient-enriched and nutrient-depleted media. In co-cultures, the growth of P. donghaiense is inhibited; (2) feeding on P. donghaiense by K. veneficum is clearly demonstrated by fluorescent dye tracking; and (3) the isolated karlotoxin is lethal to P. donghaiense in a concentration-dependent manner. From these studies we propose that K. veneficum may play a negative role in P. donghaiense bloom maintenance and that P. donghaiense may in turn be a bloom initiator as a prey item for K. veneficum.

19.
PLoS One ; 10(2): e0117351, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-25658744

RESUMEN

Lipoxygenases (LOXs) are key enzymes to regulate the production of hormones and defensive metabolites in plants, animals and algae. In this research, a full length LOX gene has been cloned and expressed from the red alga Pyropia haitanensis (Bangiales, Rhodophyta) gametophyte (PhLOX2). Subsequent phylogenetic analysis showed that such LOX enzymes are separated at the early stage of evolution, establishing an independent branch. The LOX activity was investigated at the optimal pH of 8.0. It appears that PhLOX2 is a multifunctional enzyme featuring both lipoxygenase and hydroperoxidase activities. Additionally, PhLOX2 exhibits remarkable substrate and position flexibility, and it can catalyze an array of chemical reactions involving various polyunsaturated fatty acids, ranging from C18 to C22. As a matter of fact, mono-hydroperoxy, di-hydroperoxy and hydroxyl products have been obtained from such transformations, and eicosapentaenoic acid seem to be the most preferred substrate. It was found that at least triple ethylenic bonds are required for PhLOX2 to function as a LOX, and the resulting hydroxy products should be originated from the PhLOX2 mediated reduction of mono-hydroperoxides, in which the hydrogen abstraction occurs on the carbon atom between the second and third double bond. Most of the di-hydroperoxides observed seem to be missing their mono-position precursors. The substrate and position flexibility, as well as the function versatility of PhLOXs represent the ancient enzymatic pathway for organisms to control intracellular oxylipins.


Asunto(s)
Etilenos/metabolismo , Ácidos Grasos Insaturados/metabolismo , Radicales Libres/metabolismo , Lipooxigenasa/metabolismo , Rhodophyta/enzimología , Secuencia de Aminoácidos , Biocatálisis , Dominio Catalítico , Cromatografía Líquida de Alta Presión , Ácido Eicosapentaenoico/análisis , Ácido Eicosapentaenoico/metabolismo , Etilenos/química , Evolución Molecular , Ácidos Grasos Insaturados/química , Radicales Libres/química , Hidrógeno/química , Hidrógeno/metabolismo , Concentración de Iones de Hidrógeno , Cinética , Lipooxigenasa/clasificación , Lipooxigenasa/genética , Espectrometría de Masas , Datos de Secuencia Molecular , Oxidación-Reducción , Filogenia , ARN Mensajero/metabolismo , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/química , Proteínas Recombinantes/aislamiento & purificación , Rhodophyta/metabolismo , Alineación de Secuencia , Especificidad por Sustrato
20.
Se Pu ; 32(8): 861-6, 2014 Aug.
Artículo en Zh | MEDLINE | ID: mdl-25434123

RESUMEN

A method for the simultaneous determination of indole-3-acetic acid, N6-(2-isopentenyl) adenosine, N6-(2-isopentenyl) adenine, trans-zeatin riboside, zeatin, strigolactone, abscisic acid, salicylic acid, gibberellin A3 and jasmonic acid in five different parts of main branch, lateral branch, primary leaf, secondary leaf and stem of Sargasum fusiforme (Hary.) Seichell was established by high performance liquid chromatography-triple quadrupole mass spectrometry (HPLC-TQMS). The samples were extracted with methanol/water/formic acid (15 : 4 :1, v/v/v) (containing 0.5% 2, 6-di-tert-butyl-4-methylphenol, BHT) after vacuum freeze-drying. The separation was performed on a Hypersil Gold C18 column by using methanol and water as mobile phases with gradient elution. The analytes were detected by tandem mass spectrometry in selected reaction monitoring (SRM) mode. The electrospray ionization (ESI) source was used for the quantitative analysis in the positive mode or negative mode. Under the optimized conditions, the correlation coefficients (r) of the ten phytohormones were from 0. 9989 to 1. 0000 in the linear ranges. The detection limits of the ten phytohormones were 0. 001 2-4. 651 2 µ/L. The average recoveries were 72. 24% -91. 31% with the relative standard deviations not more than 6. 59%. In the five parts of fresh Sargasum fusiforme (Hary.) Seichell samples, the contents of the ten phytohormones were from not detected to 4 041. 431 ng/g. This method has good sensitivity, precision, recovery, and can be used to simultaneously determine the phytohormones.


Asunto(s)
Reguladores del Crecimiento de las Plantas/análisis , Sargassum/química , Espectrometría de Masa por Ionización de Electrospray , Ácido Abscísico , Cromatografía Líquida de Alta Presión , Ciclopentanos , Giberelinas , Ácidos Indolacéticos , Isopenteniladenosina/análogos & derivados , Oxilipinas , Reproducibilidad de los Resultados , Espectrometría de Masas en Tándem
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