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1.
Hum Mol Genet ; 27(18): 3206-3217, 2018 09 15.
Artículo en Inglés | MEDLINE | ID: mdl-29901742

RESUMEN

Rare monogenic diseases affect millions worldwide; although over 4500 rare disease genotypes are known, disease-modifying drugs are available for only 5% of them. The sheer number of these conditions combined with their rarity precludes traditional costly drug discovery programs. An economically viable alternative is to repurpose established drugs for rare diseases. Many genetic diseases result from increased or decreased protein activity and identification of clinically approved drugs which moderate this pathogenic dosage holds therapeutic potential. To identify such agents for neurogenetic diseases, we have generated genome-wide transcriptome profiles of mouse primary cerebrocortical cultures grown in the presence of 218 blood-brain barrier (BBB) penetrant clinic-tested drugs. RNAseq and differential expression analyses were used to generate transcriptomic profiles; therapeutically relevant drug-gene interactions related to rare neurogenetic diseases identified in this fashion were further analyzed by quantitative reverse transcriptase-polymerase chain reaction, western blot and immunofluorescence. We have created a transcriptome-wide searchable database for easy access to the gene expression data resulting from the cerebrocortical drug screen (Neuron Screen) and have mined this data to identify a novel link between thyroid hormone and expression of the peripheral neuropathy associated gene Pmp22. Our results demonstrate the utility of cerebrocortical cultures for transcriptomic drug screening, and the database we have created will foster further discovery of novel links between over 200 clinic-tested BBB penetrant drugs and genes related to diverse neurologic conditions.


Asunto(s)
Corteza Cerebral/efectos de los fármacos , Evaluación Preclínica de Medicamentos , Enfermedades del Sistema Nervioso Periférico/tratamiento farmacológico , Transcriptoma/genética , Animales , Barrera Hematoencefálica/efectos de los fármacos , Corteza Cerebral/citología , Regulación de la Expresión Génica/efectos de los fármacos , Genoma Humano/efectos de los fármacos , Secuenciación de Nucleótidos de Alto Rendimiento , Humanos , Ratones , Enfermedades del Sistema Nervioso Periférico/patología
3.
J Water Health ; 17(2): 237-253, 2019 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-30942774

RESUMEN

Legionella pneumophila, found in engineered water systems such as HVAC cooling towers, poses a significant public health risk. Culture, though routinely used to quantify L. pneumophila, has several disadvantages including long turnaround time, low sensitivity, and inter-laboratory variability. In this study, we validated the performance of an on-site quantitative polymerase chain reaction (qPCR) detection system for L. pneumophila in accordance with International Standards Organization Technical Specification 12869:2012. We evaluated specificity, limit of detection and quantification, and calibration curve linearity. Additionally, we evaluated whole system recovery and robustness using samples taken from taps and evaporative cooling towers. We then compared the system's performance against laboratory culture and laboratory qPCR across 53 cooling towers in a 12-week in-field study. We found that concordance between on-site qPCR and culture was both laboratory- and site/sample-dependent. Comparison of laboratory qPCR with on-site qPCR revealed that laboratory results were highly variable and showed little concordance. Some discordance may be explained by time delay between sample collection and testing ('shipping effect') which may lead to inaccurate reporting. Overall, our study highlights the value of on-site qPCR detection of L. pneumophila, demonstrates that laboratories are prone to misreporting results due to shipping effects, and reveals significant discordance between laboratory qPCR and culture.


Asunto(s)
Aire Acondicionado , Legionella pneumophila , Reacción en Cadena en Tiempo Real de la Polimerasa/métodos , Microbiología del Agua , Recuento de Colonia Microbiana , Legionella , Sensibilidad y Especificidad
4.
Dev Biol ; 411(1): 85-100, 2016 Mar 01.
Artículo en Inglés | MEDLINE | ID: mdl-26795056

RESUMEN

Neurogenesis is regulated by the dynamic and coordinated activity of several extracellular signalling pathways, but the basis for crosstalk between these pathways remains poorly understood. Here we investigated regulatory interactions between two pathways that are each required for neural progenitor cell maintenance in the postnatal retina; Hedgehog (Hh) and Notch signalling. Both pathways are activated in progenitor cells in the postnatal retina based on the co-expression of fluorescent pathway reporter transgenes at the single cell level. Disrupting Notch signalling, genetically or pharmacologically, induces a rapid downregulation of all three Gli proteins and inhibits Hh-induced proliferation. Ectopic Notch activation, while not sufficient to promote Hh signalling or proliferation, increases Gli2 protein. We show that Notch regulation of Gli2 in Müller glia renders these cells competent to proliferate in response to Hh. These data suggest that Notch signalling converges on Gli2 to prime postnatal retinal progenitor cells and Müller glia to proliferate in response to Hh.


Asunto(s)
Células Ependimogliales/citología , Proteínas Hedgehog/metabolismo , Factores de Transcripción de Tipo Kruppel/metabolismo , Células-Madre Neurales/citología , Neurogénesis/fisiología , Receptores Notch/metabolismo , Animales , Proliferación Celular/fisiología , Femenino , Factores de Transcripción de Tipo Kruppel/genética , Masculino , Ratones , Ratones Endogámicos C57BL , Ratones Noqueados , Células-Madre Neurales/metabolismo , Proteínas Nucleares/genética , ARN Mensajero/genética , Receptores Notch/genética , Retina/citología , Retina/embriología , Transducción de Señal , Factores de Transcripción/genética , Proteína con Dedos de Zinc GLI1 , Proteína Gli2 con Dedos de Zinc
5.
Am J Med Genet A ; 170A(1): 11-8, 2016 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-26373900

RESUMEN

PDAC (also termed Matthew Wood) syndrome is a rare, autosomal recessive disorder characterized by pulmonary hypoplasia/aplasia, diaphragmatic defects, bilateral anophthalmia, and cardiac malformations. The disorder is caused by mutations in STRA6, an important regulator of vitamin A and retinoic acid metabolism. We describe six cases from four families of Hmong ancestry, seen over a 30 years period in California. These include: (i) consanguineous siblings with a combination of bilateral anophthalmia, diaphragmatic abnormalities, truncus arteriosus, and/or pulmonary agenesis/hypoplasia; (ii) a singleton fetus with bilateral anophthalmia, pulmonary agenesis, cardiac malformation, and renal hypoplasia; (iii) a sibling pair with a combination of antenatal contractures, camptodactyly, fused palpebral fissures, pulmonary agenesis, and/or truncus arteriosus; (iv) a fetus with bilateral anophthalmia, bushy eyebrows, pulmonary agenesis, heart malformation, and abnormal hand positioning. The phenotypic spectrum of PDAC syndrome has until now not included contractures or camptodactyly. Sequencing of STRA6 in unrelated members of families three and four identified a novel, shared homozygous splice site alteration (c.113 + 3_4delAA) that is predicted to be pathogenic. We hypothesize this may represent a unique disease allele in the Hmong. We also provide a focused review of all published PDAC syndrome cases with confirmed or inferred STRA6 mutations, illustrating the phenotypic and molecular variability that characterizes this disorder.


Asunto(s)
Anomalías Múltiples/genética , Empalme Alternativo/genética , Anoftalmos/genética , Contractura/genética , Deformidades Congénitas de la Mano/genética , Enfermedades Pulmonares/genética , Pulmón/anomalías , Proteínas de la Membrana/genética , Microftalmía/genética , Mutación/genética , Anomalías Múltiples/patología , Anoftalmos/patología , California , Consanguinidad , Contractura/patología , Femenino , Edad Gestacional , Deformidades Congénitas de la Mano/patología , Cardiopatías Congénitas/genética , Cardiopatías Congénitas/patología , Homocigoto , Humanos , Recién Nacido , Pulmón/patología , Enfermedades Pulmonares/patología , Masculino , Microftalmía/patología , Linaje , Embarazo , Pronóstico , Síndrome
6.
Dev Biol ; 395(2): 199-208, 2014 Nov 15.
Artículo en Inglés | MEDLINE | ID: mdl-25251699

RESUMEN

Retinoic acid is required for diverse ontogenic processes and as such identification of the genes and pathways affected by retinoic acid is critical to understanding these pleiotropic effects. The presomitic mesoderm of the E8.5 mouse embryo is composed of undifferentiated cells that are depleted of retinoic acid, yet are competent to respond to the retinoid signal. We have exploited these properties to use this tissue to identify novel retinoic acid-responsive genes, including candidate target genes, by treating E8.5 embryos with retinoic acid and assessing changes in gene expression in the presomitic mesoderm by microarray analysis. This exercise yielded a cohort of genes that were differentially expressed in response to exogenous retinoic acid exposure. Among these were a number of previously characterized retinoic acid targets, validating this approach. In addition, we recovered a number of novel candidate target genes which were confirmed as retinoic acid-responsive by independent analysis. Chromatin immunoprecipitation assays revealed retinoic acid receptor occupancy of the promoters of certain of these genes. We further confirmed direct retinoic acid regulation of the F11r gene, a new RA target, using tissue culture models. Our results reveal a significant number of potential RA targets implicated in embryonic development and offer a novel in vivo system for better understanding of retinoid-dependent transcription.


Asunto(s)
Moléculas de Adhesión Celular/metabolismo , Embrión de Mamíferos/metabolismo , Regulación de la Expresión Génica/efectos de los fármacos , Mesodermo/metabolismo , Receptores de Superficie Celular/metabolismo , Tretinoina/metabolismo , Animales , Moléculas de Adhesión Celular/genética , Inmunoprecipitación de Cromatina , Cartilla de ADN/genética , Ensayo de Cambio de Movilidad Electroforética , Hibridación in Situ , Ratones , Análisis por Micromatrices , Receptores de Superficie Celular/genética , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Tretinoina/farmacología
7.
Breast Cancer Res ; 17: 7, 2015 Jan 16.
Artículo en Inglés | MEDLINE | ID: mdl-25592291

RESUMEN

INTRODUCTION: Periostin (Postn) is a secreted cell adhesion protein that activates signaling pathways to promote cancer cell survival, angiogenesis, invasion, and metastasis. Interestingly, Postn is frequently overexpressed in numerous human cancers, including breast, lung, colon, pancreatic, and ovarian cancer. METHODS: Using transgenic mice expressing the Neu oncogene in the mammary epithelium crossed into Postn-deficient animals, we have assessed the effect of Postn gene deletion on Neu-driven mammary tumorigenesis. RESULTS: Although Postn is exclusively expressed in the stromal fibroblasts of the mammary gland, Postn deletion does not affect mammary gland outgrowth during development or pregnancy. Furthermore, we find that loss of Postn in the mammary epithelium does not alter breast tumor initiation or growth in mouse mammary tumor virus (MMTV)-Neu expressing mice but results in an apocrine-like tumor phenotype. Surprisingly, we find that tumors derived from Postn-null animals express low levels of Notch protein and Hey1 mRNA but increased expression of androgen receptor (AR) and AR target genes. We show that tumor cells derived from wild-type animals do not proliferate when transplanted in a Postn-null environment but that this growth defect is rescued by the overexpression of active Notch or the AR target gene prolactin-induced protein (PIP/GCDFP-15). CONCLUSIONS: Together our data suggest that loss of Postn in an ErbB2/Neu/HER2 overexpression model results in apocrine-like tumors that activate an AR-dependent pathway. This may have important implications for the treatment of breast cancers involving the therapeutic targeting of periostin or Notch signaling.


Asunto(s)
Moléculas de Adhesión Celular/deficiencia , Receptor ErbB-2/genética , Receptor ErbB-2/metabolismo , Receptor Notch1/metabolismo , Receptores Androgénicos/metabolismo , Neoplasias de las Glándulas Sudoríparas/genética , Neoplasias de las Glándulas Sudoríparas/metabolismo , Animales , Glándulas Apocrinas/metabolismo , Glándulas Apocrinas/patología , Neoplasias de la Mama/genética , Neoplasias de la Mama/metabolismo , Neoplasias de la Mama/patología , Moléculas de Adhesión Celular/genética , Moléculas de Adhesión Celular/metabolismo , Transformación Celular Neoplásica/genética , Transformación Celular Neoplásica/metabolismo , Modelos Animales de Enfermedad , Femenino , Expresión Génica , Genotipo , Humanos , Inmunohistoquímica , Glándulas Mamarias Animales/metabolismo , Ratones , Ratones Noqueados , Ratones Transgénicos , Fenotipo , Neoplasias de las Glándulas Sudoríparas/mortalidad , Neoplasias de las Glándulas Sudoríparas/patología , Carga Tumoral
8.
Hum Mol Genet ; 22(5): 1005-16, 2013 Mar 01.
Artículo en Inglés | MEDLINE | ID: mdl-23201751

RESUMEN

Norrie disease (ND) is a congenital disorder characterized by retinal hypovascularization and cognitive delay. ND has been linked to mutations in 'Norrie Disease Protein' (Ndp), which encodes the secreted protein Norrin. Norrin functions as a secreted angiogenic factor, although its role in neural development has not been assessed. Here, we show that Ndp expression is initiated in retinal progenitors in response to Hedgehog (Hh) signaling, which induces Gli2 binding to the Ndp promoter. Using a combination of genetic epistasis and acute RNAi-knockdown approaches, we show that Ndp is required downstream of Hh activation to induce retinal progenitor proliferation in the retina. Strikingly, Ndp regulates the rate of cell-cycle re-entry and not cell-cycle kinetics, thereby uncoupling the self-renewal and cell-cycle progression functions of Hh. Taken together, we have uncovered a cell autonomous function for Ndp in retinal progenitor proliferation that is independent of its function in the retinal vasculature, which could explain the neural defects associated with ND.


Asunto(s)
Ceguera/congénito , Proteínas del Ojo/genética , Factores de Transcripción de Tipo Kruppel/genética , Proteínas del Tejido Nervioso/genética , Enfermedades del Sistema Nervioso/genética , Retina/metabolismo , Espasmos Infantiles/genética , Vía de Señalización Wnt , Animales , Ceguera/genética , Ceguera/metabolismo , Ciclo Celular/genética , Proliferación Celular , Epistasis Genética , Proteínas del Ojo/metabolismo , Regulación del Desarrollo de la Expresión Génica , Enfermedades Genéticas Ligadas al Cromosoma X , Proteínas Hedgehog/metabolismo , Humanos , Factores de Transcripción de Tipo Kruppel/metabolismo , Ratones , Ratones Transgénicos , Mutación , Neovascularización Fisiológica , Proteínas del Tejido Nervioso/metabolismo , Enfermedades del Sistema Nervioso/metabolismo , Unión Proteica , Retina/crecimiento & desarrollo , Degeneración Retiniana , Vasos Retinianos/crecimiento & desarrollo , Vasos Retinianos/metabolismo , Espasmos Infantiles/metabolismo , Vía de Señalización Wnt/genética , Proteína Gli2 con Dedos de Zinc
9.
J Med Genet ; 51(7): 470-4, 2014 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-24706940

RESUMEN

BACKGROUND: Sedaghatian-type spondylometaphyseal dysplasia (SSMD) is a neonatal lethal form of spondylometaphyseal dysplasia characterised by severe metaphyseal chondrodysplasia with mild limb shortening, platyspondyly, cardiac conduction defects, and central nervous system abnormalities. As part of the FORGE Canada Consortium we studied two unrelated families to identify the genetic aetiology of this rare disease. METHODS AND RESULTS: Whole exome sequencing of a child affected with SSMD and her unaffected parents identified two rare variants in GPX4. The first (c.587+5G>A) was inherited from the mother, and the second (c.588-8_588-4del) was de novo (NM_001039848.1); both were predicted to impact splicing of GPX4. In vitro studies confirmed the mutations spliced out part of exon 4 and skipped exon 5, respectively, with both resulting in a frameshift and premature truncation of GPX4. Subsequently, a second child with SSMD was identified; although DNA from the child was not available, the two unaffected parents were found by Sanger sequencing to each carry the same heterozygous stop mutation in exon 3 of GPX4, c.381C>A, p.Tyr127* (NM_001039848.1). CONCLUSIONS: Our identification of truncating mutations in GPX4 in two families affected with SSMD supports the pathogenic role of mutated GPX4 in this very rare disease. GPX4 is a member of the glutathione peroxidase family of antioxidant defence enzymes and protects cells against membrane lipid peroxidation. GPX4 is essential for early embryo development, regulating anti-oxidative and anti-apoptotic activities. Our findings highlight the importance of this enzyme in development of the cardiac, nervous, and skeletal systems.


Asunto(s)
Mutación del Sistema de Lectura , Glutatión Peroxidasa/genética , Osteocondrodisplasias/diagnóstico por imagen , Osteocondrodisplasias/genética , Secuencia de Aminoácidos , Secuencia de Bases , Codón sin Sentido , Consanguinidad , Análisis Mutacional de ADN , Resultado Fatal , Femenino , Estudios de Asociación Genética , Predisposición Genética a la Enfermedad , Células HEK293 , Humanos , Recién Nacido , Masculino , Datos de Secuencia Molecular , Osteocondrodisplasias/enzimología , Linaje , Fosfolípido Hidroperóxido Glutatión Peroxidasa , Polimorfismo de Nucleótido Simple , Radiografía
10.
Dev Biol ; 361(1): 1-11, 2012 Jan 01.
Artículo en Inglés | MEDLINE | ID: mdl-22015720

RESUMEN

Vertebrate Cdx genes encode homeodomain transcription factors related to caudal in Drosophila. The murine Cdx homologues Cdx1, Cdx2 and Cdx4 play important roles in anterior-posterior patterning of the embryonic axis and the intestine, as well as axial elongation. While our understanding of the ontogenic programs requiring Cdx function has advanced considerably, the molecular bases underlying these functions are less well understood. In this regard, Cdx1-Cdx2 conditional mutants exhibit abnormal somite formation, while loss of Cdx1-Cdx2 in the intestinal epithelium results in a shift in differentiation toward the Goblet cell lineage. The aim of the present study was to identify the Cdx-dependent mechanisms impacting on these events. Consistent with prior work implicating Notch signaling in these pathways, we found that expression of the Notch ligand Dll1 was reduced in Cdx mutants in both the intestinal epithelium and paraxial mesoderm. Cdx members occupied the Dll1 promoter both in vivo and in vitro, while genetic analysis indicated interaction between Cdx and Dll1 pathways in both somitogenesis and Goblet cell differentiation. These findings suggest that Cdx members operate upstream of Dll1 to convey different functions in two distinct lineages.


Asunto(s)
Tipificación del Cuerpo/genética , Diferenciación Celular/genética , Proteínas de Homeodominio/metabolismo , Péptidos y Proteínas de Señalización Intercelular/metabolismo , Mucosa Intestinal/embriología , Somitos/embriología , Factores de Transcripción/metabolismo , Animales , Tipificación del Cuerpo/fisiología , Factor de Transcripción CDX2 , Proteínas de Unión al Calcio , Inmunoprecipitación de Cromatina , Ensayo de Cambio de Movilidad Electroforética , Células Caliciformes/citología , Técnicas Histológicas , Proteínas de Homeodominio/genética , Hibridación in Situ , Mesodermo/embriología , Ratones , Ratones Noqueados , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Transducción de Señal/genética , Transducción de Señal/fisiología , Somitos/metabolismo , Factores de Transcripción/genética
11.
BMC Neurosci ; 13: 152, 2012 Dec 15.
Artículo en Inglés | MEDLINE | ID: mdl-23241222

RESUMEN

BACKGROUND: The rd1 mouse retina is a well-studied model of retinal degeneration where rod photoreceptors undergo cell death beginning at postnatal day (P) 10 until P21. This period coincides with photoreceptor terminal differentiation in a normal retina. We have used the rd1 retina as a model to investigate early molecular defects in developing rod photoreceptors prior to the onset of degeneration. RESULTS: Using a microarray approach, we performed gene profiling comparing rd1 and wild type (wt) retinas at four time points starting at P2, prior to any obvious biochemical or morphological differences, and concluding at P8, prior to the initiation of cell death. Of the 143 identified differentially expressed genes, we focused on Rab acceptor 1 (Rabac1), which codes for the protein Prenylated rab acceptor 1 (PRA1) and plays an important role in vesicular trafficking. Quantitative RT-PCR analysis confirmed reduced expression of PRA1 in rd1 retina at all time points examined. Immunohistochemical observation showed that PRA1-like immunoreactivity (LIR) co-localized with the cis-Golgi marker GM-130 in the photoreceptor as the Golgi translocated from the perikarya to the inner segment during photoreceptor differentiation in wt retinas. Diffuse PRA1-LIR, distinct from the Golgi marker, was seen in the distal inner segment of wt photoreceptors starting at P8. Both plexiform layers contained PRA1 positive punctae independent of GM-130 staining during postnatal development. In the inner retina, PRA1-LIR also colocalized with the Golgi marker in the perinuclear region of most cells. A similar pattern was seen in the rd1 mouse inner retina. However, punctate and significantly reduced PRA1-LIR was present throughout the developing rd1 inner segment, consistent with delayed photoreceptor development and abnormalities in Golgi sorting and vesicular trafficking. CONCLUSIONS: We have identified genes that are differentially regulated in the rd1 retina at early time points, which may give insights into developmental defects that precede photoreceptor cell death. This is the first report of PRA1 expression in the retina. Our data support the hypothesis that PRA1 plays an important role in vesicular trafficking between the Golgi and cilia in differentiating and mature rod photoreceptors.


Asunto(s)
Proteínas de la Membrana/fisiología , Células Fotorreceptoras de Vertebrados/fisiología , Transporte de Proteínas/fisiología , Animales , Autoantígenos/metabolismo , Modelos Animales de Enfermedad , Perfilación de la Expresión Génica/métodos , Regulación del Desarrollo de la Expresión Génica/genética , Regulación del Desarrollo de la Expresión Génica/fisiología , Aparato de Golgi/metabolismo , Proteínas de la Membrana/biosíntesis , Proteínas de la Membrana/genética , Proteínas de la Membrana/metabolismo , Ratones , Ratones Endogámicos C57BL , Ratones Mutantes , Células Fotorreceptoras de Vertebrados/metabolismo , Transporte de Proteínas/genética , Retina/crecimiento & desarrollo , Retina/metabolismo , Degeneración Retiniana/genética , Degeneración Retiniana/metabolismo
12.
Mol Vis ; 18: 645-56, 2012.
Artículo en Inglés | MEDLINE | ID: mdl-22509096

RESUMEN

PURPOSE: During mammalian eye development, the restriction of Wnt/ß-catenin signaling at the junction of the neural retina and the retinal pigment epithelium in the peripheral eyecup is required for the development of the ciliary margin, a non-neural region of the eyecup that is the precursor of the ciliary body and iris of the adult eye. METHODS: To identify genes that are modulated by ß-catenin activity in the embryonic retina, we performed gene expression profiling in Li(+)-treated retinal explants, a pharmacological model of ß-catenin activation. The Li(+)-modulated gene data set was searched for ß-catenin/T-cell specific transcription factor binding sites. RESULTS: Functional annotations of this data set revealed significant enrichments for genes involved in chromatin organization, neurogenesis, and cell motion/migration. Quantitative real-time polymerase chain reaction (qRT-PCR) analysis confirmed the modulation of 12 genes in Li(+)-treated explants and retinas of mice with Cre-mediated induction of constitutively active ß-catenin (ß-cat(act)). In situ hybridization revealed ß-catenin-specific upregulation of cyclin-dependent kinase inhibitor 1A (P21) [Cdkn1a] and tumor necrosis factor receptor superfamily, member 19 (Tnfrsf19) in the developing retina consistent with the antineurogenic and proliferation changes associated with ectopic Wnt/ß-catenin signaling in the eyecup. CONCLUSIONS: This data set of Li(+)-modulated genes provides a valuable resource for characterizing the Wnt/ ß-catenin regulated gene network in eyecup patterning.


Asunto(s)
Regulación del Desarrollo de la Expresión Génica/efectos de los fármacos , Receptores del Factor de Necrosis Tumoral/metabolismo , Epitelio Pigmentado de la Retina/metabolismo , Proteínas Wnt/metabolismo , beta Catenina/metabolismo , Quinasas p21 Activadas/metabolismo , Animales , Embrión de Mamíferos , Femenino , Perfilación de la Expresión Génica , Cloruro de Litio/farmacología , Ratones , Ratones Transgénicos , Receptores del Factor de Necrosis Tumoral/genética , Epitelio Pigmentado de la Retina/efectos de los fármacos , Técnicas de Cultivo de Tejidos , Regulación hacia Arriba , Proteínas Wnt/genética , Vía de Señalización Wnt/efectos de los fármacos , beta Catenina/genética , Quinasas p21 Activadas/genética
13.
Nat Commun ; 11(1): 1990, 2020 04 24.
Artículo en Inglés | MEDLINE | ID: mdl-32332749

RESUMEN

Up-regulation of utrophin in muscles represents a promising therapeutic strategy for the treatment of Duchenne Muscular Dystrophy. We previously demonstrated that eEF1A2 associates with the 5'UTR of utrophin A to promote IRES-dependent translation. Here, we examine whether eEF1A2 directly regulates utrophin A expression and identify via an ELISA-based high-throughput screen, FDA-approved drugs that upregulate both eEF1A2 and utrophin A. Our results show that transient overexpression of eEF1A2 in mouse muscles causes an increase in IRES-mediated translation of utrophin A. Through the assessment of our screen, we reveal 7 classes of FDA-approved drugs that increase eEF1A2 and utrophin A protein levels. Treatment of mdx mice with the 2 top leads results in multiple improvements of the dystrophic phenotype. Here, we report that IRES-mediated translation of utrophin A via eEF1A2 is a critical mechanism of regulating utrophin A expression and reveal the potential of repurposed drugs for treating DMD via this pathway.


Asunto(s)
Distrofia Muscular de Duchenne/tratamiento farmacológico , Factor 1 de Elongación Peptídica/antagonistas & inhibidores , Biosíntesis de Proteínas/efectos de los fármacos , Utrofina/genética , Regiones no Traducidas 5'/genética , Animales , Betaxolol/farmacología , Betaxolol/uso terapéutico , Línea Celular , Modelos Animales de Enfermedad , Evaluación Preclínica de Medicamentos , Reposicionamiento de Medicamentos , Humanos , Sitios Internos de Entrada al Ribosoma/genética , Ratones , Ratones Endogámicos mdx , Ratones Noqueados , Distrofia Muscular de Duchenne/genética , Mioblastos , Factor 1 de Elongación Peptídica/genética , Factor 1 de Elongación Peptídica/metabolismo , Pravastatina/farmacología , Pravastatina/uso terapéutico , Biosíntesis de Proteínas/genética , Regulación hacia Arriba/efectos de los fármacos , Utrofina/metabolismo
14.
J Neurochem ; 108(1): 91-101, 2009 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-19014374

RESUMEN

Color vision is supported by retinal cone photoreceptors that, in most mammals, express two photopigments sensitive to short (S-opsin) or middle (M-opsin) wavelengths. Expression of the Opn1sw and Opn1mw genes, encoding S-opsin and M-opsin, respectively, is under the control of nuclear receptors, including thyroid hormone receptor beta2 (TRbeta2), retinoid X receptor gamma (RXRgamma), and RORbeta, a member of the retinoic acid receptor-related orphan receptor (ROR) family. We now demonstrate that RORalpha, another member of the ROR family, regulates Opn1sw, Opn1mw, as well as Arr3 (cone arrestin) in the mouse retina. RORalpha expression is detected in cones by postnatal day 3 and maintained through adulthood. The retinas of staggerer mice, carrying a null mutation of RORalpha, show significant down-regulation of Opn1sw, Opn1mw, and Arr3. RORalpha acts in synergy with cone-rod homeobox transcription factor (Crx), to activate the Opn1sw promoter in vitro. Chromatin immunoprecipitation assays reveal that RORalpha directly binds to the Opn1sw promoter, Opn1mw locus control region, and the Arr3 promoter in vivo. Our data suggest that RORalpha plays a crucial role in cone development by directly regulating multiple cone genes.


Asunto(s)
Regulación hacia Abajo/fisiología , Regulación del Desarrollo de la Expresión Génica/fisiología , Receptores Citoplasmáticos y Nucleares/fisiología , Retina , Células Fotorreceptoras Retinianas Conos/metabolismo , Transactivadores/fisiología , Animales , Animales Recién Nacidos , Arrestinas/metabolismo , Factores de Transcripción con Cremalleras de Leucina de Carácter Básico/deficiencia , Inmunoprecipitación de Cromatina/métodos , Embrión de Mamíferos , Proteínas del Ojo , Proteínas de Homeodominio , Ratones , Ratones Endogámicos C57BL , Ratones Noqueados , Ratones Mutantes Neurológicos , Miembro 1 del Grupo F de la Subfamilia 1 de Receptores Nucleares , Retina/citología , Retina/embriología , Retina/crecimiento & desarrollo , Opsinas de Bastones/metabolismo , Transfección
15.
Brain Res ; 1135(1): 1-11, 2007 Mar 02.
Artículo en Inglés | MEDLINE | ID: mdl-17214977

RESUMEN

Cortical spreading depression (CSD) induces waves of neuronal depolarization that confer neuroprotection to subsequent ischemic events in the rat brain. To gain insights into the molecular mechanisms elicited by CSD, we used representational difference analysis (RDA) to identify mRNAs induced by potassium depolarization in vivo. Using this approach, we have isolated a cDNA encoding the SIM2-related bHLH-PAS protein Nxf. Our results confirm that Nxf mRNA and protein are rapidly and transiently expressed in cortical neurons following CSD. Reporter assays show that Nxf is a transcriptional activator that associates with the bHLH-PAS sub-class co-factor ARNT2. Adenovirus-mediated expression of epitope-tagged Nxf results in cell death and the direct activation of the Bax gene in cultured cells. However, RNA interference studies show that endogenous Nxf is required for optimal neuroprotection by preconditioning in cultured F-11 cells. Together, our data indicate that Nxf is a novel bHLH-PAS transactivator transiently induced by preconditioning and that its sustained expression is detrimental. The identification of Nxf may represent an important step in our understanding of the molecular mechanisms of brain preconditioning and injury.


Asunto(s)
Factores de Transcripción con Motivo Hélice-Asa-Hélice Básico/metabolismo , Depresión de Propagación Cortical/fisiología , Expresión Génica/fisiología , Neuronas/fisiología , Animales , Animales Recién Nacidos , Translocador Nuclear del Receptor de Aril Hidrocarburo/metabolismo , Factores de Transcripción con Motivo Hélice-Asa-Hélice Básico/genética , Encéfalo/citología , Encéfalo/efectos de los fármacos , Muerte Celular/fisiología , Células Cultivadas , Depresión de Propagación Cortical/efectos de los fármacos , Ganglios Espinales/citología , Expresión Génica/efectos de los fármacos , Regulación de la Expresión Génica/fisiología , Ratones , Neuroblastoma , Neuronas/efectos de los fármacos , Fosfopiruvato Hidratasa/metabolismo , Potasio/farmacología , Ratas , Factores de Tiempo , Transactivadores/fisiología , Transfección/métodos , Proteína X Asociada a bcl-2/metabolismo
16.
Sci Rep ; 6: 22867, 2016 03 11.
Artículo en Inglés | MEDLINE | ID: mdl-26965927

RESUMEN

We report successful retinal cone enrichment and transplantation using a novel cone-GFP reporter mouse line. Using the putative cone photoreceptor-enriched transcript Coiled-Coil Domain Containing 136 (Ccdc136) GFP-trapped allele, we monitored developmental reporter expression, facilitated the enrichment of cones, and evaluated transplanted GFP-labeled cones in wildtype and retinal degeneration mutant retinas. GFP reporter and endogenous Ccdc136 transcripts exhibit overlapping temporal and spatial expression patterns, both initiated in cone precursors of the embryonic retina and persisting to the adult stage in S and S/M opsin(+) cones as well as rod bipolar cells. The trapped allele does not affect cone function or survival in the adult mutant retina. When comparing the integration of GFP(+) embryonic cones and postnatal Nrl(-/-) 'cods' into retinas of adult wildtype and blind mice, both cell types integrated and exhibited a degree of morphological maturation that was dependent on donor age. These results demonstrate the amenability of the adult retina to cone transplantation using a novel transgenic resource that can advance therapeutic cone transplantation in models of age-related macular degeneration.

17.
Elife ; 52016 11 08.
Artículo en Inglés | MEDLINE | ID: mdl-27823583

RESUMEN

The tumor microenvironment is a critical modulator of carcinogenesis; however, in many tumor types, the influence of the stroma during preneoplastic stages is unknown. Here we explored the relationship between pre-tumor cells and their surrounding stroma in malignant progression of the cerebellar tumor medulloblastoma (MB). We show that activation of the vascular regulatory signalling axis mediated by Norrin (an atypical Wnt)/Frizzled4 (Fzd4) inhibits MB initiation in the Ptch+/- mouse model. Loss of Norrin/Fzd4-mediated signalling in endothelial cells, either genetically or by short-term blockade, increases the frequency of pre-tumor lesions and creates a tumor-permissive microenvironment at the earliest, preneoplastic stages of MB. This pro-tumor stroma, characterized by angiogenic remodelling, is associated with an accelerated transition from preneoplasia to malignancy. These data expose a stromal component that regulates the earliest stages of tumorigenesis in the cerebellum, and a novel role for the Norrin/Fzd4 axis as an endogenous anti-tumor signal in the preneoplastic niche.


Asunto(s)
Carcinogénesis , Proteínas del Ojo/metabolismo , Receptores Frizzled/metabolismo , Meduloblastoma/fisiopatología , Proteínas del Tejido Nervioso/metabolismo , Transducción de Señal , Animales , Modelos Animales de Enfermedad , Regulación de la Expresión Génica , Ratones
18.
J Neurosci ; 24(34): 7576-82, 2004 Aug 25.
Artículo en Inglés | MEDLINE | ID: mdl-15329405

RESUMEN

In mammalian retinas, rods and cones connect to distinct sets of bipolar cells. In the retina of Nrl (neural retina leucine zipper) knock-out mice, in which rods fail to form and all photoreceptors are cones, rod bipolar cells have normal morphology, pattern of staining, and lamination, but they form synaptic connections with cones. Hence, retinal interneurons are not entirely committed to the choice of their synaptic partners; also, their morphology and pattern of distribution of their processes in the synaptic layers of the retina are not instructed by the establishment of synaptic connections with cognate photoreceptor(s). These findings are of considerable relevance for our understanding of mechanisms responsible for cell recognition during development and in the context of using transplanted tissue to restore vision in retinal degeneration.


Asunto(s)
Células Fotorreceptoras Retinianas Conos/citología , Células Fotorreceptoras Retinianas Bastones/citología , Animales , Factores de Transcripción con Cremalleras de Leucina de Carácter Básico , Diferenciación Celular , Proteínas de Unión al ADN/genética , Proteínas del Ojo/genética , Interneuronas/citología , Interneuronas/fisiología , Ratones , Ratones Noqueados , Terminales Presinápticos/ultraestructura , Células Fotorreceptoras Retinianas Conos/fisiología , Células Fotorreceptoras Retinianas Conos/ultraestructura , Células Fotorreceptoras Retinianas Bastones/fisiología , Células Fotorreceptoras Retinianas Bastones/ultraestructura
19.
J Neurosci ; 23(14): 6152-60, 2003 Jul 09.
Artículo en Inglés | MEDLINE | ID: mdl-12853434

RESUMEN

The shutoff mechanisms of the rod visual transduction cascade involve G-protein-coupled receptor (GPCR) kinase 1 (GRK1) phosphorylation of light-activated rhodopsin (R*) followed by rod arrestin binding. Deactivation of the cone phototransduction cascade in the mammalian retina is delineated poorly. In this study we sought to explore the potential mechanisms underlying the quenching of the phototransduction cascade in cone photoreceptors by using mouse models lacking rods and/or GRK1. Using the "pure-cone" retinas of the neural retina leucine zipper (Nrl) knock-out (KO, -/-) mice (Mears et al., 2001), we have demonstrated the light-dependent, multi-site phosphorylation of both S and M cone opsins by in situ phosphorylation and isoelectric focusing. Immunoprecipitation with affinity-purified polyclonal antibodies against either mouse cone arrestin (mCAR) or mouse S and M cone opsins revealed specific binding of mCAR to light-activated, phosphorylated cone opsins. To elucidate the potential role of GRK1 in cone opsin phosphorylation, we created Nrl and Grk1 double knock-out (Nrl-/-Grk1-/-) mice by crossing the Nrl-/- mice with Grk1-/- mice (Chen et al., 1999). We found that, in the retina of these mice, the light-activated cone opsins were neither phosphorylated nor bound with mCAR. Our results demonstrate, for the first time in a mammalian species, that cone opsins are phosphorylated and that CAR binds to phosphorylated cone opsins after light activation.


Asunto(s)
Arrestina/metabolismo , Proteínas Quinasas/metabolismo , Retina/fisiología , Células Fotorreceptoras Retinianas Conos/metabolismo , Opsinas de Bastones/metabolismo , Animales , Arrestina/química , Factores de Transcripción con Cremalleras de Leucina de Carácter Básico , Membrana Celular/metabolismo , Proteínas de Unión al ADN/deficiencia , Proteínas de Unión al ADN/genética , Oscuridad , Proteínas del Ojo/genética , Quinasa 1 del Receptor Acoplado a Proteína-G , Técnicas In Vitro , Focalización Isoeléctrica , Luz , Ratones , Ratones Endogámicos C57BL , Ratones Noqueados , Fosforilación , Pruebas de Precipitina , Unión Proteica/fisiología , Proteínas Quinasas/deficiencia , Proteínas Quinasas/genética , Retina/citología , Opsinas de Bastones/química , Visión Ocular/fisiología
20.
Invest Ophthalmol Vis Sci ; 46(6): 2156-67, 2005 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-15914637

RESUMEN

PURPOSE: To test the hypothesis that Nrl(-)(/)(-) photoreceptors are cones, by comparing them with WT rods and cones using morphological, molecular, histochemical, and electrophysiological criteria. METHODS: The photoreceptor layer of fixed retinal tissue of 4- to 6-week-old mice was examined in plastic sections by electron microscopy, and by confocal microscopy in frozen sections immunolabeled for the mouse UV-cone pigment and colabeled with PNA. Quantitative immunoblot analysis was used to determine the levels of expression of key cone-specific proteins. Single- and paired-flash methods were used to extract the spectral sensitivity, kinetics, and amplification of the a-wave of the ERG. RESULTS: Outer segments of Nrl(-/-) photoreceptors ( approximately 7 mum) are shorter than those of wild-type (WT) rods ( approximately 25 mum) and cones ( approximately 15 mum); but, like WT cones, they have 25 or more basal discs open to the extracellular space, extracellular matrix sheaths stained by PNA, chromatin "clumping" in their nuclei, and mitochondria two times shorter than rods. Nrl(-/-) photoreceptors express the mouse UV cone pigment, cone transducin, and cone arrestin in amounts expected, given the relative size and density of cones in the two retinas. The ERG a-wave was used to assay the properties of the photocurrent response. The sensitivity of the Nrl(-/-) a-wave is at its maximum at 360 nm, with a secondary mode at 510 nm having approximately one-tenth the maximum sensitivity. These wavelengths are the lambda(max) of the two mouse cone pigments. The time to peak of the dim-flash photocurrent response was approximately 50 ms, more than two times faster than that of rods. CONCLUSIONS: Many morphological, molecular, and electrophysiological features of the Nrl(-/-) photoreceptors are cone-like, and strongly distinguish these cells from rods. This retina provides a model for the investigation of cone function and cone-specific genetic disease.


Asunto(s)
Proteínas de Unión al ADN/fisiología , Proteínas del Ojo/fisiología , Leucina Zippers/fisiología , Células Fotorreceptoras Retinianas Conos/citología , Células Fotorreceptoras Retinianas Conos/fisiología , Animales , Arrestina/metabolismo , Factores de Transcripción con Cremalleras de Leucina de Carácter Básico , Biomarcadores/metabolismo , Electrofisiología , Electrorretinografía , Femenino , Immunoblotting , Ratones , Ratones Endogámicos BALB C , Ratones Noqueados , Microscopía Confocal , Microscopía Electrónica , Embarazo , Pigmentos Retinianos/metabolismo , Rodopsina/metabolismo , Transducina/metabolismo , Visión Ocular/fisiología
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