RESUMEN
Three cDNA clones encoding NG,NG-dimethylarginine dimethylamino-hydrolase (EC 3.5.3.18) have been isolated from a rat kidney lambda gt11 library using a probe prepared by PCR on the basis of partially determined amino-acid sequences of the enzyme. The sequence analyses of the cDNAs established that the 3008 bp cDNA contains 855 bp open reading frame encoding 285 amino acids (M(r) 31414), 3'-flanking region (1722 bp) and 5'-flanking region (431 bp). The amino-acid sequences of all the peptides isolated from the purified enzyme were shown to be included in the deduced amino-acid sequence. Northern blotting analyses showed that the mRNA (4 kb) is ubiquitously expressed in various rat tissues.
Asunto(s)
Amidohidrolasas , Hidrolasas/genética , Riñón/enzimología , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Northern Blotting , Clonación Molecular , ADN Complementario/genética , Datos de Secuencia Molecular , ARN Mensajero/aislamiento & purificación , Ratas , Análisis de Secuencia de ADNRESUMEN
In an attempt to determine the regions responsible for type I immediate hypersensitivity, a total of 42 peptide fragments, which cover the CH3-CH4 domains in human immunoglobulin E (IgE), were chemically synthesized. Several peptide fragments located in the amino acid sequences Ala329-Thr357 and Arg419-Ala463, inhibited passive cutaneous anaphylaxis (PCA) in vivo. In order to pinpoint the sites responsible for the inhibition of the PCA reaction, various fragment peptides in these two regions were synthesized. As a result, residues Pro343-Leu348, Pro426-Thr433, and Ser456-Thr461 were suggested to be involved in type I immediate hypersensitivity.
Asunto(s)
Hipersensibilidad Inmediata/inmunología , Inmunoglobulina E/inmunología , Anafilaxis Cutánea Pasiva/inmunología , Secuencia de Aminoácidos , Animales , Sitios de Unión , Humanos , Hipersensibilidad Inmediata/prevención & control , Regiones Constantes de Inmunoglobulina/inmunología , Masculino , Ratones , Datos de Secuencia Molecular , Ratas , Ratas WistarRESUMEN
To delineate the binding site in the human immunoglobulin E (IgE) molecule to the Fc epsilon receptor on basophils and mast cells, we chemically synthesized a total of 71 peptide fragments within the sequence Ser300-Lys547 in the human IgE molecule. The synthetic peptides were tested for their capacity to inhibit passive sensitization of human peripheral basophils with atopic patient's serum containing the specific IgE against dust mites in vitro. It was found that a peptide fragment, Pro345-Ile356, potently inhibited the passive sensitization. To clarify the minimal active core, various analogues, such as shortened, substituted (by Gly or Ala residue), omission and retro-sequence peptides, were synthesized and assayed. The results suggested that the sequence Pro345-Lys352 in the human IgE molecule would be an IgE binding site, and that a synthetic octapeptide, Pro345-Phe-Asp-Leu-Phe-Ile-Arg-Lys352, inhibited the passive sensitization, probably by occupying the Fc epsilon receptor sites on the cells.
Asunto(s)
Basófilos/inmunología , Inmunoglobulina E/inmunología , Receptores de IgE/metabolismo , Alérgenos , Secuencia de Aminoácidos , Animales , Humanos , Hipersensibilidad , Inmunización Pasiva , Inmunoglobulina E/química , Técnicas In Vitro , Ácaros/inmunología , Datos de Secuencia Molecular , Fragmentos de Péptidos/química , Fragmentos de Péptidos/inmunología , Alineación de SecuenciaRESUMEN
Transglutaminase (epsilon-glutaminyl-peptide:amine gamma-glutaminyl-transferase, EC 2.3.2.13) (TGase) is an enzyme that catalyzes acyl transfer reactions between primary amines and Gln residues in proteins and peptides. The substrate specificity of TGase for primary amines was investigated to incorporate various functional groups into proteins and peptides. In this study, microbial transglutaminase and guinea pig liver transglutaminase were used. For the primary amines to be incorporated into benzyloxycarbonyl-L-Gln-Gly (Z-Gln-Gly), they were required to have more than four carbon chains without side chains between the functional groups. These results suggest that with appropriate primary amines as spacers, various functional groups, carboxyl groups, phosphate groups, saccharides, and so on, can be incorporated into proteins by using TGase.
Asunto(s)
Bacterias/enzimología , Hígado/enzimología , Transglutaminasas/metabolismo , Aminas , Animales , Cobayas , Especificidad por SustratoRESUMEN
It has been suggested that peptide inhibitors of prolyl endopeptidase (PEP) may act as anti-amnestic agents. In the hope of finding PEP inhibitors in milk proteins, we synthesized a total of 37 human beta-casein peptide fragments containing proline residues. It was found that the peptides with PEP inhibition activity in vitro were located in the region of amino acid residues 49-59 of human beta-casein. The most potent inhibitor was Ile-Tyr-Pro-Phe-Val-Glu-Pro-Ile (IC50 = 8 microM).
Asunto(s)
Caseínas/farmacología , Endopeptidasas/metabolismo , Fragmentos de Péptidos/farmacología , Serina Endopeptidasas , Inhibidores de Serina Proteinasa/farmacología , Secuencia de Aminoácidos , Caseínas/química , Humanos , Datos de Secuencia Molecular , Fragmentos de Péptidos/química , Prolil Oligopeptidasas , Inhibidores de Serina Proteinasa/químicaRESUMEN
The sweet protein, monellin, consists of two noncovalently associated polypeptide chains, the A chain of 44 amino acid residues and the B chain of 50 residues. The B chain was synthesized by the stepwise Fmoc solid-phase method in an overall yield of 6.2%. The synthetic B chain was combined with the synthetic A chain, which was left over from a previous work, to give monellin in a yield of 25.7%. The synthetic monellin was approximately 4000 times as sweet as sucrose, while the previously synthesized [Asn49, Glu50] B-chain monellin was also approximately 4000 times as sweet as sucrose. Exchanging Glu49 and Asn50 in the B chain did not affect the sweetness potency. Crystallization was performed by a vapor diffusion method.
Asunto(s)
Proteínas de Plantas/síntesis química , Secuencia de Aminoácidos , Cristalización , Datos de Secuencia Molecular , Proteínas de Plantas/química , Conformación Proteica , Edulcorantes/síntesis química , Edulcorantes/químicaRESUMEN
The sweet protein monellin consists of two noncovalently associated polypeptide chains, the A chain of 44 amino acid residues and the B chain of 50 residues. Since blocking the free SH group of Cys41 in the B chain or treating the adjacent Met42 with CNBr removed its sweetness, this part of the molecule has been suggested to be essential for the sweetness. The [Ser41] B chain, an analogue of the B chain, was synthesized by the stepwise Fmoc solid-phase method in an overall yield of 1.9%. The synthetic B chain analogue was combined with the A chain, which was left over from a previous work, to give [Ser41] B-chain monellin in a yield of 31.0%. This synthetic monellin analogue was 2000 times as sweet as sucrose. Changing the Cys41 residue to the Ser residue significantly decreased the sweetness potency and stability of the molecule in solution. Crystallization was carried out by a vapor diffusion method.
Asunto(s)
Proteínas de Plantas/síntesis química , Secuencia de Aminoácidos , Sustancias Macromoleculares , Datos de Secuencia Molecular , Serina/químicaRESUMEN
Some properties and applications of the transglutaminase (TGase) referred to as microbial TGase (MTGase), derived from a variant of Streptomyces mobaraensis (formerly classified as Streptoverticillium mobaraense), are described. MTGase cross-linked most food proteins, such as caseins, soybean globulins, gluten, actin, myosins, and egg proteins, as efficiently as mammalian TGases by forming an epsilon-(gamma-glutamyl)lysine bond. However, unlike many other TGases, MTGase is calcium-independent and has a relatively low molecular weight. Both of these properties are of advantage in industrial applications; a number of studies have illustrated the potential of MTGase in food processing and other areas. The crystal structure of MTGase has been solved. It provides basic structural information on the MTGase and accounts well for its characteristics. Moreover, an efficient method for producing extracellular MTGase has been established using Corynebacterium glutamicum. MTGase may be expected to find many uses in both food and non-food applications.
Asunto(s)
Dipéptidos/química , Dipéptidos/metabolismo , Streptomyces/enzimología , Transglutaminasas/metabolismo , Coenzimas , Corynebacterium/genética , Corynebacterium/metabolismo , Modelos Moleculares , Peso Molecular , Estructura Terciaria de Proteína , Proteínas/metabolismo , Transglutaminasas/genética , Transglutaminasas/aislamiento & purificaciónRESUMEN
Monellin, a sweet protein, consists of two noncovalently associated polypeptide chains, the A chain of 44 amino acid residues and the B chain of 50 residues. Two different primary structures have been reported for each of the A and B chains. The A and B chains corresponding to one of the reported monellin structures were synthesized by the stepwise solid-phase method using the Fmoc strategy in overall yields of 14.1% and 5.6%, respectively. The characterization of the synthetic peptides by HPLC, FAB-MS, amino acid analysis and sequencing fully supported the expected structures. The individual synthetic A and B chains were not sweet. Combination of the two chains, and subsequent HPLC purification gave monellin in a yield of 53.9%. The synthetic monellin had a distinct, lingering sweet taste (4000 times sweeter than sucrose) and was crystallized by a vapor diffusion method. The synthetic product was identical to natural monellin by HPLC, but not by tryptic mapping. These results indicate that the reported structure for monellin differs slightly from that of natural monellin.
Asunto(s)
Proteínas de Plantas/síntesis química , Secuencia de Aminoácidos , Cromatografía Líquida de Alta Presión , Cristalización , Espectrometría de Masas , Datos de Secuencia Molecular , Proteínas de Plantas/químicaRESUMEN
The sweet protein monellin consists of two noncovalently associated polypeptide chains, the A chain of 44 amino acid residues and the B chain of 50 residues. Two different primary structures have been reported for each of these chains. The complete amino acid sequence of monellin was determined by a combination of FAB- and ESI-mass spectrometry, and by automatic Edman degradation.
Asunto(s)
Proteínas de Plantas/química , Secuencia de Aminoácidos , Aminoácidos/análisis , Cromatografía Líquida de Alta Presión , Espectrometría de Masas , Datos de Secuencia Molecular , Fragmentos de Péptidos/análisis , Fragmentos de Péptidos/química , TripsinaRESUMEN
The sweet protein monellin consists of two noncovalently associated polypeptide chains, the A chain of 44 amino acid residues and the B chain of 50 residues. The [Asn22, Gln25, Asn26]-A chain, an anologue of the A chain, was synthesized by the stepwise Fmoc-solid-phase method in an overall yield of 13.4%. The synthetic A chain analogue was combined with the [Asn49, Glu50]-B chain, which was left over from a previous work, to give [Asn22, Gln25, Asn26]-A-chain-[Asn49,Glu50]-B-chain-monellin in a yield of 26.2%. This synthetic monellin analogue was approximately 550 times sweeter than sucrose. Changing the carboxyl groups of Asp22, Glu25, and Asp26 of the A chain to amide groups significantly decreased the sweetness potency. Crystallization was performed by a vapor diffusion method.
Asunto(s)
Proteínas de Plantas , Proteínas de Plantas/síntesis química , Secuencia de Aminoácidos , Cromatografía Líquida de Alta Presión , Cristalización , Datos de Secuencia Molecular , Proteínas de Plantas/química , Espectrometría de Masa Bombardeada por Átomos VelocesRESUMEN
In an attempt to delineate the binding site(s) of monellin to the receptor by means of a structure-taste relationship, we synthesized four monellin analogues, [AsnA16]-, [AsnA22]-, [GlnA25]-, and [AsnA26]-monellin, which were 7500, 750, 2500, and 5500 times as sweet as sucrose on a weight basis, respectively. Among them, [AsnA22]monellin and [GlnA25]monellin were less sweet than monellin, and were susceptible to the HPLC conditions used. It can be concluded that Asp16, Asp22, Glu25, and Asp26 residues of the A chain did not participate in binding with the receptor, since the sweet taste was not removed by replacing the amino acid residues with Asn or Gln. It can also be concluded that Asp22 and Glu25 of the A chain may have participated in intramolecular binding, as was pointed out by Kim et al., since exchanging Asp22 and Glu25 of the A chain with Asn and Gln significantly decreased the stability in solution.
Asunto(s)
Proteínas de Plantas/síntesis química , Secuencia de Aminoácidos , Células Quimiorreceptoras/efectos de los fármacos , Cromatografía Líquida de Alta Presión , Humanos , Datos de Secuencia Molecular , Gusto/efectos de los fármacosRESUMEN
The sweet protein monellin consists of two noncovalently associated polypeptide chains, the A chain of 44 amino acid residues and the B chain of 50 residues. Synthetic monellin is 4000 times as sweet as sucrose on a weight basis, and the native conformation is essential for the sweet taste. Knowledge of the active site of monellin will provide important information on the mode of interaction between sweeteners and their receptors. If the replacement of a certain amino acid residue in monellin removes the sweet taste, while the native conformation is retained, it may be concluded that the position replaced is the active site. Our previous replacement studies on Asp residues in the A chain did not remove the sweet taste. The B chain contains two Asp residues at positions 7 and 21, which were replaced by Asn. [AsnB21]Monellin and [AsnB7]monellin were 7000 and 20 times sweeter than sucrose, respectively. The low potency of the [AsnB7]monellin indicates that AspB7 participates in binding with the receptor. AspB7 was then replaced by Abu. [AbuB7]Monellin was devoid of sweetness, and retained the native conformation. AspB7 is located at the surface of the molecule (Ogata et al.). These results suggest that Asp7 in the B chain is the highly probable active site of monellin.
Asunto(s)
Péptidos/química , Proteínas de Plantas/química , Verduras/química , Secuencia de Aminoácidos , Sitios de Unión , Cromatografía Líquida de Alta Presión , Dicroismo Circular , Indicadores y Reactivos , Sustancias Macromoleculares , Datos de Secuencia Molecular , Péptidos/síntesis química , Péptidos/aislamiento & purificación , Proteínas de Plantas/síntesis química , Conformación Proteica , Espectrometría de Fluorescencia , Relación Estructura-ActividadRESUMEN
Sweet aspartyl di- and tripeptide esters were extended toward the N-terminus in relation to the structural features of sweet peptides. The sweet peptides were designed on the basis of the receptor site model. It was found that an extension of the sweet aspartyl dipeptide esters by adding a small D-amino acid residue mostly gave sweet compounds (e.g., D-Ala-L-Asp-D-Ala-OMe), although this significantly decreased their sweetness potencies. Further extension at the N-terminus of the extended sweet tripeptide esters to yield the tetrapeptide esters resulted in a loss of the sweet taste. The N-terminal extension of sweet aspartyl tripeptide esters resulted in faintly sweet or nonsweet tetrapeptide esters. Interestingly, an analogous extension at the N-terminus of the sweet aminomalonyl dipeptide esters gave bitter compounds (e.g., D-Ala-DL-Ama-L-Phe-OMe). These results indicate that the receptor has a small space that can accomodate an additional small D-amino acid residue at the site facing the N-terminus of sweet aspartyl dipeptide esters.
Asunto(s)
Péptidos/síntesis química , Edulcorantes/síntesis química , Secuencia de Aminoácidos , Humanos , Datos de Secuencia Molecular , Péptidos/farmacología , Relación Estructura-Actividad , Edulcorantes/farmacologíaRESUMEN
Transglutaminase (TGase) is an enzyme that catalyzes acyl transfer reactions between primary amines and Gln residues in proteins or peptides. Substrate specificities of TGase, Ca2+-independent microbial transglutaminase (MTGase), and Ca2+-dependent tissue type transglutaminase from guinea pig liver (GTGase) and fish, Red sea bream (Pagrus major), liver (FTGase), for acyl donors were investigated using synthetic peptides containing Gln residues and Gln analogues with different lengths of side chain. MTGase dose not recognize the Gln analogues as a substrate and has strict substrate specificities toward L-Gln. Substrate peptides with a variety of sequences around the Gln residue, GXXQXXG (X=G, A, S, L, V, F, Y, R, N, E, L) were synthesized and used as acyl donors. As an acyl acceptor, the fluorescent reagent monodancyl cadaverine was used and the reactions analyzed with RP-HPLC. Substitution of the C-terminal of a Gln residue with a hydrophobic amino acid accelerated the reaction by GTGase and FTGase. N-terminal substitution of Gln residues had similar effects on the reaction by MTGase.
Asunto(s)
Péptidos/metabolismo , Transglutaminasas/metabolismo , Sustitución de Aminoácidos , Animales , Glutamina/química , Glutamina/metabolismo , Cobayas , Leucina/química , Leucina/metabolismo , Hígado/enzimología , Péptidos/síntesis química , Péptidos/química , Especificidad de la Especie , Relación Estructura-Actividad , Especificidad por SustratoRESUMEN
Monellin, a sweet protein, consists of two noncovalently associated polypeptide chains: an A chain of 44 amino acid residues and a B chain of 50 residues. Microbial transglutaminase (MTGase) was used for ligation of the monellin subunits without any protecting groups, and without activation of the C alpha-carboxyl group at the C-terminus. Since a peptide fragment LLQG is a good substrate for MTGase to form an amide bond between the gamma-amide group of the Gln residue and the epsilon-amino group of Lys, a monellin B chain analogue in which LLQG was elongated at the C-terminus (B-LLQG) was synthesized by solid-phase synthesis. The monellin A chain analogue in which KGK was elongated at the N-terminus (KGK-A) was synthesized by the same method as that of the B chain analogue. The KGK-A chain and the B-LLQG chain were coupled by MTGase to give single-chain analogue of monellin. The single-chain analogue of monellin was characterized by analytical reverse phase high performance liquid chromatography, electrospray ionization, and amino acid analyses. All analyses gave satisfactory results. The single-chain analogue of monellin was more heat stable than natural monellin.
Asunto(s)
Proteínas de Plantas/química , Proteínas de Plantas/síntesis química , Transglutaminasas , Secuencia de Aminoácidos , Cromatografía Líquida de Alta Presión , Indicadores y Reactivos , Datos de Secuencia Molecular , Fragmentos de Péptidos/química , Relación Estructura-Actividad , Edulcorantes/síntesis química , Edulcorantes/químicaRESUMEN
The crystal structure of the tissue-type transglutaminase from red sea bream liver (fish-derived transglutaminase, FTG) has been determined at 2.5-A resolution using the molecular replacement method, based on the crystal structure of human blood coagulation factor XIII, which is a transglutaminase zymogen. The model contains 666 residues of a total of 695 residues, 382 water molecules, and 1 sulfate ion. FTG consists of four domains, and its overall and active site structures are similar to those of human factor XIII. However, significant structural differences are observed in both the acyl donor and acyl acceptor binding sites, which account for the difference in substrate preferences. The active site of the enzyme is inaccessible to the solvent, because the catalytic Cys-272 hydrogen-bonds to Tyr-515, which is thought to be displaced upon acyl donor binding to FTG. It is postulated that the binding of an inappropriate substrate to FTG would lead to inactivation of the enzyme because of the formation of a new disulfide bridge between Cys-272 and the adjacent Cys-333 immediately after the displacement of Tyr-515. Considering the mutational studies previously reported on the tissue-type transglutaminases, we propose that Cys-333 and Tyr-515 are important in strictly controlling the enzymatic activity of FTG.
Asunto(s)
Peces/metabolismo , Proteínas de Unión al GTP/química , Transglutaminasas/química , Secuencia de Aminoácidos , Animales , Cristalografía por Rayos X , Factor XIII/química , Hígado/enzimología , Modelos Moleculares , Datos de Secuencia Molecular , Conformación Proteica , Proteína Glutamina Gamma Glutamiltransferasa 2 , Homología de Secuencia de AminoácidoRESUMEN
A major soybean allergen, Gly m Bd 30K, is a glycoprotein. A peptide containing a sugar chain was isolated from an alpha-chymotrypic hydrolyzate of the allergen. The amino acid sequence analysis of the peptide showed that its sugar chain binds to the Asn170 residue. Furthermore, the sugar moiety of the allergen and peptide was shown to consist of mannose, N-acetylglucosamine, fucose, and xylose at a molar ratio of 3 : 2 : 1 : 1. These results indicate that Gly m Bd 30 K is a N-linked glycoprotein.
Asunto(s)
Alérgenos/análisis , Glycine max/química , Alérgenos/metabolismo , Secuencia de Aminoácidos , Sitios de Unión , Glicoproteínas/análisis , Glicoproteínas/metabolismo , Glicosilación , Datos de Secuencia Molecular , Glycine max/inmunologíaRESUMEN
Enzymatic deamidation of αsl-casein was done by using Ca(2 +)-independent microbial transglutaminase (MTGase) of a variant of Streptoverticillium mobaraense. Although the amount of deamidated glutamine residues in αsl -casein was not as high as that of the case using guinea pig liver transglutaminase (GTGase), the improvements in pH-solubility and Ca(2 +)-sensitivity profile of the substrate protein were comparable to it. To do the enzymatic deamidation without chemical acylation of Lys residues of αsl- casein, several immobilized MTGase were prepared with two types of chitosan beads. Although neither αsl-casein nor ß-casein was deamidated, dimethyl casein and citraconylated soy 7S globulin were deamidated by using the immobilized enzymes.