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1.
Compatibility of Distinct Label-Free Proteomic Workflows in Absolute Quantification of Proteins Linked to the Oocyte Quality in Human Follicular Fluid.
Int J Mol Sci
; 22(14)2021 Jul 10.
Artículo
en Inglés
| MEDLINE | ID: mdl-34299044
2.
AfsK-Mediated Site-Specific Phosphorylation Regulates DnaA Initiator Protein Activity in Streptomyces coelicolor.
J Bacteriol
; 202(3)2020 01 15.
Artículo
en Inglés
| MEDLINE | ID: mdl-31712280
3.
A general method for the derivation of the functional forms of the effective energy terms in coarse-grained energy functions of polymers. III. Determination of scale-consistent backbone-local and correlation potentials in the UNRES force field and force-field calibration and validation.
J Chem Phys
; 150(15): 155104, 2019 Apr 21.
Artículo
en Inglés
| MEDLINE | ID: mdl-31005069
4.
Qualitative and Quantitative Analysis of Proteome and Peptidome of Human Follicular Fluid Using Multiple Samples from Single Donor with LC-MS and SWATH Methodology.
J Proteome Res
; 16(8): 3053-3067, 2017 08 04.
Artículo
en Inglés
| MEDLINE | ID: mdl-28658951
5.
Maximum Likelihood Calibration of the UNRES Force Field for Simulation of Protein Structure and Dynamics.
J Chem Inf Model
; 57(9): 2364-2377, 2017 09 25.
Artículo
en Inglés
| MEDLINE | ID: mdl-28809487
6.
Lessons from application of the UNRES force field to predictions of structures of CASP10 targets.
Proc Natl Acad Sci U S A
; 110(37): 14936-41, 2013 Sep 10.
Artículo
en Inglés
| MEDLINE | ID: mdl-23980156
7.
Gain-of-function mutation in complement C2 protein identified in a patient with aHUS.
J Allergy Clin Immunol
; 146(4): 916-919.e11, 2020 10.
Artículo
en Inglés
| MEDLINE | ID: mdl-32113979
8.
A Maximum-Likelihood Approach to Force-Field Calibration.
J Chem Inf Model
; 55(9): 2050-70, 2015 Sep 28.
Artículo
en Inglés
| MEDLINE | ID: mdl-26263302
9.
Mean-field interactions between nucleic-acid-base dipoles can drive the formation of a double helix.
Phys Rev Lett
; 110(9): 098101, 2013 Mar 01.
Artículo
en Inglés
| MEDLINE | ID: mdl-23496746
10.
Correction to Maximum Likelihood Calibration of the UNRES Force Field for Simulation of Protein Structure and Dynamics.
J Chem Inf Model
; 58(1): 206, 2018 01 22.
Artículo
en Inglés
| MEDLINE | ID: mdl-29283263
11.
Substitutions at position 263 within the von Willebrand factor type A domain determine the functionality of complement C2 protein.
Front Immunol
; 13: 1061696, 2022.
Artículo
en Inglés
| MEDLINE | ID: mdl-36591303
12.
Modeling the Structure, Dynamics, and Transformations of Proteins with the UNRES Force Field.
Methods Mol Biol
; 2376: 399-416, 2022.
Artículo
en Inglés
| MEDLINE | ID: mdl-34845623
13.
Computational techniques for efficient conformational sampling of proteins.
Curr Opin Struct Biol
; 18(2): 134-9, 2008 Apr.
Artículo
en Inglés
| MEDLINE | ID: mdl-18215513
14.
Gain-of-Function Mutations R249C and S250C in Complement C2 Protein Increase C3 Deposition in the Presence of C-Reactive Protein.
Front Immunol
; 12: 724361, 2021.
Artículo
en Inglés
| MEDLINE | ID: mdl-34899688
15.
Mechanism of formation of the C-terminal beta-hairpin of the B3 domain of the immunoglobulin binding protein G from Streptococcus. III. Dynamics of long-range hydrophobic interactions.
Proteins
; 78(3): 723-37, 2010 Feb 15.
Artículo
en Inglés
| MEDLINE | ID: mdl-19847914
16.
Evidence, from simulations, of a single state with residual native structure at the thermal denaturation midpoint of a small globular protein.
J Am Chem Soc
; 132(27): 9444-52, 2010 Jul 14.
Artículo
en Inglés
| MEDLINE | ID: mdl-20568747
17.
Mechanism of formation of the C-terminal beta-hairpin of the B3 domain of the immunoglobulin binding protein G from Streptococcus. I. Importance of hydrophobic interactions in stabilization of beta-hairpin structure.
Proteins
; 75(4): 931-53, 2009 Jun.
Artículo
en Inglés
| MEDLINE | ID: mdl-19089955
18.
Mechanism of formation of the C-terminal beta-hairpin of the B3 domain of the immunoglobulin binding protein G from Streptococcus. II. Interplay of local backbone conformational dynamics and long-range hydrophobic interactions in hairpin formation.
Proteins
; 76(3): 637-54, 2009 Aug 15.
Artículo
en Inglés
| MEDLINE | ID: mdl-19241469
19.
Human follicular fluid proteomic and peptidomic composition quantitative studies by SWATH-MS methodology. Applicability of high pH RP-HPLC fractionation.
J Proteomics
; 191: 131-142, 2019 01 16.
Artículo
en Inglés
| MEDLINE | ID: mdl-29530678
20.
Simple physics-based analytical formulas for the potentials of mean force for the interaction of amino acid side chains in water. IV. Pairs of different hydrophobic side chains.
J Phys Chem B
; 112(36): 11385-95, 2008 Sep 11.
Artículo
en Inglés
| MEDLINE | ID: mdl-18700740