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1.
Org Biomol Chem ; 22(12): 2435-2442, 2024 Mar 20.
Artículo en Inglés | MEDLINE | ID: mdl-38416037

RESUMEN

Nuclear magnetic resonance (NMR) spectroscopy complemented by density functional theory (DFT) calculations is a crucial tool for structural elucidation. Nevertheless, the precision of NMR predictions is influenced by the 'heavy atom effect', wherein heavy atoms affect the shielding values of neighboring light atoms (HALA effect). Standard practice in the field involves removing the conflicting signals. However, in the case of polyhalogenated molecules, this is challenging due to the significant amount of information that ends up being lost. In this study the HALA is thoroughly investigated in the context of three leading probability methods: DP4, MM-DP4+, and DP4+. The results show that DP4+ is more sensitive to C-Cl or C-Br signals, which is a consequence of the longer bond lengths computed with DFT. Removing conflicting signals is highly effective in DP4+, but has an uncertain outcome in methods based on molecular mechanics geometries, such as DP4 and MM-DP4+. A detailed investigation of the effect of bond distance on the corresponding chemical shifts has also been conducted.

2.
Chemistry ; 29(35): e202300420, 2023 Jun 22.
Artículo en Inglés | MEDLINE | ID: mdl-36973182

RESUMEN

The use of quantum-based NMR methods to complement and guide the connectivity and stereochemical assignment of natural and unnatural products has grown enormously. One of the unsolved problems is related to the improper calculation of the conformational landscape of flexible molecules that have functional groups capable of generating a complex network of intramolecular H-bonding (IHB) interactions. Here the authors present MESSI (Multi-Ensemble Strategy for Structural Identification), a method inspired by the wisdom of the crowd theory that breaks with the traditional mono-ensemble approach. By including independent mappings of selected artificially manipulated ensembles, MESSI greatly improves the sense of the assignment by neutralizing potential energy biases.


Asunto(s)
Hidrógeno , Teoría Cuántica , Modelos Moleculares , Conformación Molecular , Espectroscopía de Resonancia Magnética , Enlace de Hidrógeno
3.
J Org Chem ; 87(20): 13469-13479, 2022 10 21.
Artículo en Inglés | MEDLINE | ID: mdl-36150170

RESUMEN

The acid-promoted cyclization of all-trans linearly conjugated dienones and dienals constitutes a synthetic strategy for the construction of 2-cyclopentenones.


Asunto(s)
Ácidos , Ciclopentanos , Ciclización , Catálisis , Estereoisomerismo
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