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1.
Eur J Nucl Med Mol Imaging ; 50(13): 4010-4023, 2023 11.
Artículo en Inglés | MEDLINE | ID: mdl-37632562

RESUMEN

Locally advanced cervical cancer (LACC) and anal and oropharyngeal squamous cell carcinoma (ASCC and OPSCC) are mostly caused by oncogenic human papillomaviruses (HPV). In this paper, we developed machine learning (ML) models based on clinical, biological, and radiomic features extracted from pre-treatment fluorine-18-fluorodeoxyglucose positron emission tomography ([18F]-FDG PET) images to predict the survival of patients with HPV-induced cancers. For this purpose, cohorts from five institutions were used: two cohorts of patients treated for LACC including 104 patients from Gustave Roussy Campus Cancer (Center 1) and 90 patients from Leeds Teaching Hospitals NHS Trust (Center 2), two datasets of patients treated for ASCC composed of 66 patients from Institut du Cancer de Montpellier (Center 3) and 67 patients from Oslo University Hospital (Center 4), and one dataset of 45 OPSCC patients from the University Hospital of Zurich (Center 5). Radiomic features were extracted from baseline [18F]-FDG PET images. The ComBat technique was applied to mitigate intra-scanner variability. A modified consensus nested cross-validation for feature selection and hyperparameter tuning was applied on four ML models to predict progression-free survival (PFS) and overall survival (OS) using harmonized imaging features and/or clinical and biological variables as inputs. Each model was trained and optimized on Center 1 and Center 3 cohorts and tested on Center 2, Center 4, and Center 5 cohorts. The radiomic-based CoxNet model achieved C-index values of 0.75 and 0.78 for PFS and 0.76, 0.74, and 0.75 for OS on the test sets. Radiomic feature-based models had superior performance compared to the bioclinical ones, and combining radiomic and bioclinical variables did not improve the performances. Metabolic tumor volume (MTV)-based models obtained lower C-index values for a majority of the tested configurations but quite equivalent performance in terms of time-dependent AUCs (td-AUC). The results demonstrate the possibility of identifying common PET-based image signatures for predicting the response of patients with induced HPV pathology, validated on multi-center multiconstructor data.


Asunto(s)
Neoplasias del Ano , Carcinoma de Células Escamosas , Infecciones por Papillomavirus , Neoplasias del Cuello Uterino , Femenino , Humanos , Fluorodesoxiglucosa F18 , Virus del Papiloma Humano , Estudios Retrospectivos , Tomografía de Emisión de Positrones/métodos , Carcinoma de Células Escamosas/terapia , Neoplasias del Cuello Uterino/patología , Tomografía Computarizada por Tomografía de Emisión de Positrones
2.
Phys Imaging Radiat Oncol ; 30: 100578, 2024 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-38912007

RESUMEN

Background and Purpose: Automatic segmentation methods have greatly changed the RadioTherapy (RT) workflow, but still need to be extended to target volumes. In this paper, Deep Learning (DL) models were compared for Gross Tumor Volume (GTV) segmentation in locally advanced cervical cancer, and a novel investigation into failure detection was introduced by utilizing radiomic features. Methods and materials: We trained eight DL models (UNet, VNet, SegResNet, SegResNetVAE) for 2D and 3D segmentation. Ensembling individually trained models during cross-validation generated the final segmentation. To detect failures, binary classifiers were trained using radiomic features extracted from segmented GTVs as inputs, aiming to classify contours based on whether their Dice Similarity Coefficient ( DSC ) < T and DSC ⩾ T . Two distinct cohorts of T2-Weighted (T2W) pre-RT MR images captured in 2D sequences were used: one retrospective cohort consisting of 115 LACC patients from 30 scanners, and the other prospective cohort, comprising 51 patients from 7 scanners, used for testing. Results: Segmentation by 2D-SegResNet achieved the best DSC, Surface DSC ( SDSC 3 mm ), and 95th Hausdorff Distance (95HD): DSC = 0.72 ± 0.16, SDSC 3 mm =0.66 ± 0.17, and 95HD = 14.6 ± 9.0 mm without missing segmentation ( M =0) on the test cohort. Failure detection could generate precision ( P = 0.88 ), recall ( R = 0.75 ), F1-score ( F = 0.81 ), and accuracy ( A = 0.86 ) using Logistic Regression (LR) classifier on the test cohort with a threshold T = 0.67 on DSC values. Conclusions: Our study revealed that segmentation accuracy varies slightly among different DL methods, with 2D networks outperforming 3D networks in 2D MRI sequences. Doctors found the time-saving aspect advantageous. The proposed failure detection could guide doctors in sensitive cases.

3.
Materials (Basel) ; 16(5)2023 Feb 24.
Artículo en Inglés | MEDLINE | ID: mdl-36902995

RESUMEN

Given that a significant fraction of buildings and architectural heritage in Europe's historical centers are masonry structures, the selection of proper diagnosis, technological surveys, non-destructive testing, and interpretations of crack and decay patterns is paramount for a risk assessment of possible damage. Identifying the possible crack patterns, discontinuities, and associated brittle failure mechanisms within unreinforced masonry under seismic and gravity actions allows for reliable retrofitting interventions. Traditional and modern materials and strengthening techniques create a wide range of compatible, removable, and sustainable conservation strategies. Steel/timber tie-rods are mainly used to support the horizontal thrust of arches, vaults, and roofs and are particularly suitable for better connecting structural elements, e.g., masonry walls and floors. Composite reinforcing systems using carbon, glass fibers, and thin mortar layers can improve tensile resistance, ultimate strength, and displacement capacity to avoid brittle shear failures. This study overviews masonry structural diagnostics and compares traditional and advanced strengthening techniques of masonry walls, arches, vaults, and columns. Several research results in automatic surface crack detection for unreinforced masonry (URM) walls are presented considering crack detection based on machine learning and deep learning algorithms. In addition, the kinematic and static principles of Limit Analysis within the rigid no-tension model framework are presented. The manuscript sets a practical perspective, providing an inclusive list of papers describing the essential latest research in this field; thus, this paper is useful for researchers and practitioners in masonry structures.

4.
Front Physiol ; 12: 657304, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-34054575

RESUMEN

Atrial Fibrillation (AF) is the most common type of cardiac arrhythmia. Early diagnosis of AF helps to improve therapy and prognosis. Machine Learning (ML) has been successfully applied to improve the effectiveness of Computer-Aided Diagnosis (CADx) systems for AF detection. Presenting an explanation for the decision made by an ML model is considerable from the cardiologists' point of view, which decreases the complexity of the ML model and can provide tangible information in their diagnosis. In this paper, a range of explanation techniques is applied to hand-crafted features based ML models for heart rhythm classification. We validate the impact of the techniques by applying feature selection and classification to the 2017 CinC/PhysioNet challenge dataset. The results show the effectiveness and efficiency of SHapley Additive exPlanations (SHAP) technique along with Random Forest (RF) for the classification of the Electrocardiogram (ECG) signals for AF detection with a mean F-score of 0.746 compared to 0.706 for a technique based on the same features based on a cascaded SVM approach. The study also highlights how this interpretable hand-crafted feature-based model can provide cardiologists with a more compact set of features and tangible information in their diagnosis.

5.
J Imaging ; 7(2)2021 Feb 11.
Artículo en Inglés | MEDLINE | ID: mdl-34460632

RESUMEN

The popularity of social networks (SNs), amplified by the ever-increasing use of smartphones, has intensified online cybercrimes. This trend has accelerated digital forensics through SNs. One of the areas that has received lots of attention is camera fingerprinting, through which each smartphone is uniquely characterized. Hence, in this paper, we compare classification-based methods to achieve smartphone identification (SI) and user profile linking (UPL) within the same or across different SNs, which can provide investigators with significant clues. We validate the proposed methods by two datasets, our dataset and the VISION dataset, both including original and shared images on the SN platforms such as Google Currents, Facebook, WhatsApp, and Telegram. The obtained results show that k-medoids achieves the best results compared with k-means, hierarchical approaches, and different models of convolutional neural network (CNN) in the classification of the images. The results show that k-medoids provides the values of F1-measure up to 0.91% for SI and UPL tasks. Moreover, the results prove the effectiveness of the methods which tackle the loss of image details through the compression process on the SNs, even for the images from the same model of smartphones. An important outcome of our work is presenting the inter-layer UPL task, which is more desirable in digital investigations as it can link user profiles on different SNs.

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