A Highly Robust and Conducting Ultramicroporous 3D Fe(II)-Based Metal-Organic Framework for Efficient Energy Storage.

Exploitation of metal-organic framework (MOF) materials as active electrodes for energy storage or conversion is reasonably challenging owing to their poor robustness against various acidic/basic conditions and conventionally low electric conductivity. Keeping this in perspective, herein, a 3D ultramicroporous triazolate Fe-MOF (abbreviated as Fe-MET) is judiciously employed using cheap and commercially available starting materials. Fe-MET possesses ultra-stability against various chemical environments (pH-1 to pH-14 with varied organic solvents) and is highly electrically conductive (σ = 0.19 S m-1) in one fell swoop. By taking advantage of the properties mentioned above, Fe-MET electrodes give prominence to electrochemical capacitor (EC) performance by delivering an astounding gravimetric (304 F g-1) and areal (181 mF cm-2) capacitance at 0.5 A g-1 current density with exceptionally high cycling stability. Implementation of Fe-MET as an exclusive (by not using any conductive additives) EC electrode in solid-state energy storage devices outperforms most of the reported MOF-based EC materials and even surpasses certain porous carbon and graphene materials, showcasing superior capabilities and great promise compared to various other alternatives as energy storage materials.

Isomeric Benzenediol-Linked Organophosphonates as a Handy Reusable Emitting Platform: Diversity in Polyamine Vapor Detection.

This work introduces metal/column-free facile quantitative access to conformationally twisted catechol-linked organophosphonate (CAP) as a blue-emitting solid that could reversibly detect only 1,3-diaminopropane (DAP) and 1,2-ethylenediamine (EDA) vapors, belonging to industrially and pharmaceutically abundant crucial diamines. In CAP, two adjacent hydroxy groups in a benzene ring facilitate selective diamine-dihydroxy (amine-phenol type) interactions in the solid phase, leading to a quenched emission with selectively smaller aliphatic PAs, that is, DAP and EDA. The disparity was noticed with an isomeric resorcinol-linked emitter (RAP), detecting various polyamine vapors with superior sensitivity. A one-carbon-away placed hydroxy group in RAP can only generate a monoamine-hydroxy complex, not diamine-dihydroxy. The more acidic nature of resorcinol would prefer ionizing the amines and, consequently, creating amine/hydroxy interactions. More systematic investigations reveal an exciting role of amine-hydroxy realization for the catechol analog in the solid phase with a syn-anti conformation for CAP. Unlike CAP, RAP's available crystal void space creates considerable room in which to come closer and facilitates amine-phenol interactions. The role of phosphonates in the selective detection of PAs is also examined. Observed outcomes are substantiated by FT-IR, single-crystal X-ray diffraction, SEM, XPS, and mass spectroscopic studies. The proposed amine-hydroxy interactions are further supported by DFT-optimized molecular structures.

Electro-Oxidation Reaction of Methanol over La2-xSrxNi1-y(Mn/Fe/Co)yO4+δ Ruddlesden-Popper Oxides.

Solution combustion-synthesized Ruddlesden-Popper oxides La1.4Sr0.6Ni0.9(Mn/Fe/Co)0.1O4+δ were explored for the methanol electro-oxidation reaction. With optimal doping of Sr2+ in the A site and Co2+ in the B site, Ni3+ with t2g6 dx2-y21 configuration in La1.4Sr0.6Ni0.9Co0.1O4+δ exhibited a tetragonal distortion with compression in axial bonds and elongation in equatorial bonds. This structural modification fostered an augmented overlap of dz2 orbitals with axial O 2p orbitals, leading to a heightened density of states at the Fermi level. Consequently, this facilitated not only elevated electrical conductivity but also a noteworthy reduction in the charge transfer resistance. These effects collectively contributed to the exceptional methanol oxidation activity of La1.4Sr0.6Ni0.9Co0.1O4+δ, as evidenced by an impressive current density of 21.4 mA cm-2 and retention of 95% of initial current density even after 10 h of prolonged reaction. The presence of Ni3+ further played a pivotal role in the creation of NiOOH, a crucial intermediate species, facilitated by the presence of surface oxygen vacancies. These factors synergistically enabled efficient methanol oxidation. In summary, our present study not only yields substantial insights but also paves the way for a novel avenue to fine-tune the activity of Ruddlesden-Popper oxides for the successful electro-oxidation of methanol.

Unveiling the photophysical and excited state properties of multi-resonant OLED emitters using combined DFT and CCSD method.

Multi-resonance thermally-activated delayed fluorescence (MR-TADF) is predominantly observed in organoboron heteroatom-embedded molecules, featuring enhanced performance in organic light-emitting diodes (OLEDs) with high color purity, chemical stability, and excellent photoluminescence quantum yields. However, predicting the impact of any chemical change remains a challenge. Computational methods including density functional theory (DFT) still require accurate descriptions of photophysical properties of MR-TADF emitters. To circumvent this drawback, we explored recent investigations on the CzBX (Cz = carbazole, X = O, S, or Se) molecule as a central building block. We constructed a series of MR-TADF molecules by controlling chalcogen atom embedding, employing a combined approach of DFT and coupled-cluster (CCSD) methods. Our predicted results for MR-TADF emitter molecules align with the reported experimental data in the literature. The variation in the positions of chalcogen atoms embedded within the CzBX2X framework imparts unique photophysical properties.

Exploring Thioxanthone Derivatives as Singlet Oxygen Photosensitizers for Photodynamic Therapy at the Near-IR Region.

In the lowest excited triplet state, the excited photosensitizer reacts with tissue oxygen and forms reactive oxygen species (ROS), which kills tissue cells in photodynamic therapy (PDT). Metal-free thio-based pure organic molecules and analogous nucleobases can be used as photosensitizers for PDT applications. Using quantum chemical methods, we studied one- and two-photon optical absorptions, fluorescence, and other excited-state properties of substituted thioxanthone derivatives for their potential as photosensitizers for PDT. Our calculated values were compared with the available experimental data. The calculation of the intersystem crossing rate constant for these photosensitizers explains the high quantum yield of the formation of ROS, as reported experimentally. The excited triplet-state population of the photosensitizer occurs through the 1π-π* → 3n-π* channel of intersystem crossing and increases in the presence of halogen substitution.

Theoretical Insights into the Optical and Excited State Properties of Donor-Phenyl Bridge-Acceptor Containing Through-Space Charge Transfer Molecules.

A comparative new strategy to enhance thermally activated delayed fluorescence (TADF) of through-space charge transfer (CT) molecules in organic light-emitting diodes (OLEDs) is investigated. Generally, TADF molecules adopt a twisted donor and acceptor structure to get a sufficiently small ΔEST and a higher value of the spin-orbit coupling matrix element (SOCME). However, molecules containing donor-phenyl bridge-acceptor (D-p-A) units and featuring π-stacked architectures have intramolecular CT contribution through space and exhibit high TADF efficiency. We have explored the insights into the TADF mechanism in D-p-A molecules using the density functional theory (DFT) and time-dependent DFT methods. The calculated optical absorption and ΔEST values are found to be in good agreement with available experimental data. Interestingly, we found the origin of the SOCME to be the twisted orientation of the donor and bridge moieties. Also, we predicted similar molecules with enhanced OLED efficiency with different substitutions.

Improving Structural Stability and Anticoagulant Activity of a Thrombin Binding Aptamer by Aromatic Modifications.

The thrombin binding aptamer (TBA) is a 15-mer DNA oligonucleotide (5'-GGT TGG TGT GGT TGG-3'), that can form a stable intramolecular antiparallel chair-like G-quadruplex structure. This aptamer shows anticoagulant properties by interacting with one of the two anion binding sites of thrombin, namely the fibrinogen-recognition exosite. Here, we demonstrate that terminal modification of TBA with aromatic fragments such as coumarin, pyrene and perylene diimide (PDI), improves the G-quadruplex stability. The large aromatic surface of these dyes can π-π stack to the G-quadruplex or to each other, thereby stabilizing the aptamer. With respect to the original TBA, monoPDI-functionalized TBA exhibited the most remarkable improvement in melting temperature (ΔTm ≈+18 °C) and displayed enhanced anticoagulant activity.

Intersystem Crossing in Boron-Based Donor-Spiro-Acceptor Organic Chromophore: A Detailed Theoretical Study.

Intersystem crossing and reverse intersystem crossing (rISC) processes were investigated in a boron-based donor-spiro-acceptor organic chromophore which shows thermally activated delayed fluorescence. Due to the perpendicular arrangement between donor and acceptor moieties, the HOMO and the LUMO are spatially separated, and the compound shows charge transfer (CT) transitions. We found both S1 and T1 excited states are CT in nature (i.e., electron and hole wave functions are localized on acceptor and donor units, respectively) and T2, which is higher in energy than S1 and T1, is locally excited in nature (i.e., both electron and hole wave functions are localized on an acceptor unit). Because of the same nature of excitation (i.e., CT here), the spin-orbit coupling matrix element between S1 and T1 is very low and insignificant exciton conversion occurs from the T1 state to the S1 state (and vice versa). Our combined time-dependent density functional theory and quantum dynamics simulation shows that the rISC process from the T1 state to the S1 state can be enhanced by the presence of a nearby local excited triplet state (i.e., T2 state here). A smaller gap between the T1 and T2 states efficiently establishes the rISC route.

Red-Emitting Delayed Fluorescence and Room Temperature Phosphorescence from Core-Substituted Naphthalene Diimides.

Unprecedented ambient triplet-mediated emission in core-substituted naphthalene diimide (cNDI) derivatives is unveiled via delayed fluorescence and room temperature phosphorescence. Carbazole core-substituted cNDIs, with a donor-acceptor design, showed deep-red triplet emission in solution processable films with high quantum yield. This study, with detailed theoretical calculations and time-resolved emission experiments, enables new design insights into the triplet harvesting of cNDIs; an important family of molecules which has been, otherwise, extensively been investigated for its n-type electronic character and tunable singlet fluorescence.

Tuning of hyperpolarizability, and one- and two-photon absorption of donor-acceptor and donor-acceptor-acceptor-type intramolecular charge transfer-based sensors.

The present work aims to study the effect of solvent as well as arrangement of donor-acceptor groups on linear and non-linear optical (NLO) response properties of two experimentally studied intramolecular charge-transfer (ICT)-based fluorescent sensors. One of them (molecule 1) is a donor-acceptor (D-A) system with hemicyanine and dimethylanilino as electron withdrawing and donating groups, respectively, while the other one (molecule 3) is molecule 1 fused with a boron-dipyrromethene (BODIPY) moiety. BODIPY acts as the electron acceptor group of molecule 2 that as well consists of dimethylanilino as the electron donor. Density functional theory (DFT) as well as time-dependent DFT has been employed to optimize the geometry of the molecules, followed by computation of dipole moment (µ), static first hyperpolarizability (ßtotal), and one- and two-photon absorption (TPA) strengths. The results reveal that dipole moment as well as total static first hyperpolarizability (ßtotal) of the studied molecules is dominated by the respective components in the direction of charge transfer. The ratio of vector component of first hyperpolarizability (ßvec) to ßtotal also supports the unidirectional charge transfer in the studied systems. In molecule 3, which is a donor-acceptor-acceptor (D-A-A)-type system, the BODIPY moiety is found to play a major role in controlling the NLO response over the other acceptor group. Solvents are also found to play an important role in controlling the linear as well as NLO response of the studied systems. A significant increase in the first hyperpolarizability as well as TPA cross-section of the studied molecules is predicted due to an increase in the dielectric constant of the medium. The results presented are expected to provide a clue in tuning the NLO response of many ICT-based chromophores, especially those with D-A-A arrangements.

Aqueous Phase Phosphorescence: Ambient Triplet Harvesting of Purely Organic Phosphors via Supramolecular Scaffolding.

Ambient solution and amorphous state room temperature phosphorescence (RTP) from purely organic chromophores is rarely achieved. Remarkable stabilization of triplet excitons is realized to obtain deep red phosphorescence in water and in amorphous film state under ambient conditions by a unique supramolecular hybrid assembly between inorganic laponite clay and heavy atom core substituted naphthalene diimide (NDI) phosphor. Structural rigidity and oxygen tolerance of the inorganic template along with controlled molecular organization via supramolecular scaffolding are envisaged to alleviate the unprecedented aqueous phase phosphorescence.

Enhancing Selectivity and Kinetics in Oxidative Photocyclization by Supramolecular Control.

Photochemical reactions typically proceed via multiple reaction pathways, yielding a variety of isomers and products. Enhancing the selectivity is challenging. Now, the potential of supramolecular control for oxidative photocyclization of a tetraarylethylene, containing a stereogenic -C=C- bond, is demonstrated. In solution, this photochemical reaction produces three constitutional isomers (substituted phenanthrenes), with slow kinetics. When the reactant is assembled into a crystalline framework, only one product forms with accelerated kinetics. Key to this selectivity enhancement is the integration into a surface grown metal-organic framework (SURMOF); the dramatic gain in selectivity is ascribed to the hindrance of the rotational freedom of the -C=C- double bond. The structure of the MOF is key; the corresponding reaction in the solid does not result in such a high increase in selectivity. A striking change of luminescence properties after photocyclization is observed.

Up-Conversion Intersystem Crossing Rates in Organic Emitters for Thermally Activated Delayed Fluorescence: Impact of the Nature of Singlet vs Triplet Excited States.

The rates for up-conversion intersystem crossing (UISC) from the T1 state to the S1 state are calculated for a series of organic emitters with an emphasis on thermally activated delayed fluorescence (TADF) materials. Both the spin-orbit coupling and the energy difference between the S1 and T1 states (ΔEST) are evaluated, at the density functional theory (DFT) and time-dependent DFT levels. The calculated UISC rates and ΔEST values are found to be in good agreement with available experimental data. Our results underline that small ΔEST values and sizable spin-orbit coupling matrix elements have to be simultaneously realized in order to facilitate UISC and ultimately TADF. Importantly, the spatial separation of the highest occupied and lowest unoccupied molecular orbitals of the emitter, a widely accepted strategy for the design of TADF molecules, does not necessarily lead to a sufficient reduction in ΔEST; in fact, either a significant charge-transfer (CT) contribution to the T1 state or a minimal energy difference between the local-excitation and charge-transfer triplet states is required to achieve a small ΔEST. Also, having S1 and T1 states of a different nature is found to strongly enhance spin-orbit coupling, which is consistent with the El-Sayed rule for ISC rates. Overall, our results indicate that having either similar energies for the local-excitation and charge-transfer triplet states or the right balance between a substantial CT contribution to T1 and somewhat different natures of the S1 and T1 states, paves the way toward UISC enhancement and thus TADF efficiency improvement.

Sequence-specific recognition of DNA minor groove by an NIR-fluorescence switch-on probe and its potential applications.

In molecular biology, understanding the functional and structural aspects of DNA requires sequence-specific DNA binding probes. Especially, sequence-specific fluorescence probes offer the advantage of real-time monitoring of the conformational and structural reorganization of DNA in living cells. Herein, we designed a new class of D2A (one-donor-two-acceptor) near-infrared (NIR) fluorescence switch-on probe named quinone cyanine-dithiazole ( QCY-DT: ) based on the distinctive internal charge transfer (ICT) process for minor groove recognition of AT-rich DNA. Interestingly, QCY-DT: exhibited strong NIR-fluorescence enhancement in the presence of AT-rich DNA compared to GC-rich and single-stranded DNAs. We show sequence-specific minor groove recognition of QCY-DT: for DNA containing 5'-AATT-3' sequence over other variable (A/T)4 sequences and local nucleobase variation study around the 5'-X(AATT)Y-3' recognition sequence revealed that X = A and Y = T are the most preferable nucleobases. The live cell imaging studies confirmed mammalian cell permeability, low-toxicity and selective staining capacity of nuclear DNA without requiring RNase treatment. Further, Plasmodium falciparum with an AT-rich genome showed specific uptake with a reasonably low IC50 value (<4 µM). The ease of synthesis, large Stokes shift, sequence-specific DNA minor groove recognition with switch-on NIR-fluorescence, photostability and parasite staining with low IC50 make QCY-DT: a potential and commercially viable DNA probe.

Theoretical understanding of two-photon-induced fluorescence of isomorphic nucleoside analogs.

We use ab initio Density Functional Theory (DFT) and Time-dependent DFT (TDDFT) calculations for a detailed understanding of one-photon absorption (1PA) and two-photon absorption (2PA) cross sections of eight different nucleoside analogs. The results are compared and contrasted with the available experimental data. Our calculated results show that the low energy peaks in the absorption spectra mainly arise because of the π-π* electronic transition of the nucleoside analogs. The emission spectra of the nucleoside analogs are also calculated using TDDFT methods. The calculated absorption and emission spectra in the presence of a solvent follow the same trend as those found experimentally. Our results demonstrate that the nucleoside analogs show significantly different electronic and optical properties, although their bonding aspects towards Watson-Crick base pairing remain the same. We also derive the microscopic details of the origin of nonlinear optical properties of the nucleoside analogs.

Structural and magnetic properties of a variety of transition metal incorporated DNA double helices.

By using density functional theory calculations, the structural, energetic, magnetic, and optical properties for a variety of transition metal (M = Mn, Fe, Co, Ni and Cu) ions incorporated modified-DNA (M-DNA) double helices has been investigated. The DNA is modified with either hydroxypyridone (H) or bis(salicylaldehyde)ethylenediamine (S-en) metalated bases. We find the formation of extended M-O network leading to the ferromagnetic interactions for the case of H-DNA for all the metal ions. More ordered stacking arrangement was found for S-en-DNA. We calculate the exchange coupling constant (J) considering Heisenberg Hamiltonian for quantitative description of magnetic interactions. The ferromagnetic and antiferromagnetic interactions are obtained by varying different transition metal ions. The extent of the magnetic interaction depends on the number of transition metal ions. Optical profiles show peaks below 2 eV, a clear signature of spin-spin coupling.

Concentration-tuned diverse response to selective biogenic amines using a reusable fluorophore: monitoring protein-rich food spoilage.

Maintaining the freshness of food is essential for a healthy and quality life. Nevertheless, it remains a global challenge. Hence, an easy detection and monitoring protocol would be highly desirable. A cyanoacrylic acid (CAA)-based fluorophore is manifested as a reusable platform that responds diversely against different concentrations of selective aliphatic biogenic amines (BAs) in both solution and vapor phases. Slow spoilage of the protein-rich food is progressively monitored through emission shifts visible to the naked eye. This fluorophore provides easy and naked-eye detection of the BA vapor through a change in emission, i.e., red → orange → orange-yellow → cyan → green and quantum yield enhancement, which occur in stepwise increments of vapor concentrations. The probe design includes π-conjugated functionalized fluorescent molecules linked to multiple twisting sites, resulting in both solid and solution-state emission. The attached carboxylic acid responds quickly with selective BAs, mainly putrescine (PUT), cadaverine (CAD), and spermidine (SPM), where the concentration-based emission variation has appeared to be distinct and prominent against PUT [sensitivity (µM): 2 (solution); 3.3 (vapour)]. The selectivity towards diamine can be clarified by the formation of carboxylic acid salts and the consequent proton exchanges between free and protonated amines. In addition, -CN···H interaction is likely to develop within this ammonium carboxylate system, providing extra stability. Such ammonium carboxylate salt formation and gradual change in the molecular arrangement, resulting in symmetry development, are validated by FT-IR and wide-angle X-ray diffraction studies. Besides, this fact is supported by DFT studies that validate intramolecular H-atom exchange between free amine and ammonium salt units. A fluorophore-coated coverslip, filter paper, or silica gel-coated Al-plate is fruitfully utilized to detect the freshness of fish and chicken, which reveals the potential of this probe to prevent food waste and control food safety.

Rational design and investigation of nonlinear optical response properties of pyrrolopyrrole aza-BODIPY-based novel push-pull chromophores.

Intramolecular charge transfer (ICT)-based chromophores are highly sought after for designing near-infrared (NIR) absorbing and emitting dyes as well as for designing materials for nonlinear optical (NLO) applications. The properties of these 'push-pull' molecules can easily be modified by varying the electronic donor (D) and acceptor (A) groups as well as the π-conjugation linker. This study presents a methodical approach and employs quantum chemical analysis to explore the relationship between the structural features, electro-optical properties, and the NLO characteristics of molecules with D-π-A framework. The one- and two-photon absorption (2PA), linear polarizability (α), and first hyperpolarizability (ß) of some novel chromophores, consisting of a dimeric aza-Boron Dipyrromethene (aza-BODIPY) analogue, called, pyrrolopyrrole aza-BODIPY (PPAB), serving as the acceptor, have been investigated. The electronic donors used in this study are triphenylamine (TPA) and diphenylamine (DPA), and they are conjugated to the acceptor via thienyl or phenylene π-linkers. Additionally, the Hyper-Rayleigh Scattering (ßHRS), which enables direct estimation of the second-order NLO properties, is calculated for the studied chromophores with 1064 nm excitation in acetonitrile. The ß value shows a significant increase with increasing solvent polarity, indicating that the ICT plays a crucial role in shaping the NLO response of the studied molecules. The enhancement of the 2PA cross-section of the investigated molecules can also be achieved by modulating the combinations of donors and linkers. The results of our study indicate that the novel D-π-A molecules designed in this work demonstrate considerably higher hyperpolarizability values than the standard p-nitroaniline, making them promising candidates for future NLO applications.

Determination of potential inhibitors based on isatin derivatives against SARS-CoV-2 main protease (mpro): a molecular docking, molecular dynamics and structure-activity relationship studies.

SARS-COV-2, the novel coronavirus and root of global pandemic COVID-19 caused a severe health threat throughout the world. Lack of specific treatments raised an effort to find potential inhibitors for the viral proteins. The recently invented crystal structure of SARS-CoV-2 main protease (Mpro) and its key role in viral replication; non-resemblance to any human protease makes it a perfect target for inhibitor research. This article reports a computer-aided drug design (CADD) approach for the screening of 118 compounds with 16 distinct heterocyclic moieties in comparison with 5 natural products and 7 repurposed drugs. Molecular docking analysis against Mpro protein were performed finding isatin linked with a oxidiazoles (A2 and A4) derivatives to have the best docking scores of -11.22 kcal/mol and -11.15 kcal/mol respectively. Structure-activity relationship studies showed a good comparison with a known active Mpro inhibitor and repurposed drug ebselen with an IC50 value of -0.67 µM. Molecular Dynamics (MD) simulations for 50 ns were performed for A2 and A4 supporting the stability of the two compounds within the binding pocket, largely at the S1, S2 and S4 domains with high binding energy suggesting their suitability as potential inhibitors of Mpro for SARS-CoV-2.