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1.
Proc Natl Acad Sci U S A ; 120(9): e2123301120, 2023 02 28.
Artículo en Inglés | MEDLINE | ID: mdl-36827261

RESUMEN

Dehydrodiconiferyl alcohol glucoside (DCG) is a phenylpropanoid-derived plant metabolite with reported cytokinin-substituting and cell-division-promoting activity. Despite its claimed activity, DCG did not trigger morphological changes in Arabidopsis seedlings nor did it alter transcriptional shifts in cell division and cytokinin-responsive genes. In reinvestigating the bioactivity of DCG in its original setting, the previously described stimulation of tobacco callus formation could not be confirmed. No evidence was found that DCG is actually taken up by plant cells, which could explain the absence of any observable activity in the performed experiments. The DCG content in plant tissue increased when feeding explants with the DCG aglycone dehydrodiconiferyl alcohol, which is readily taken up and converted to DCG by plant cells. Despite the increased DCG content, no activity for this metabolite could be demonstrated. Our results therefore demand a reevaluation of the often-quoted cytokinin-substituting and cell-division-promoting activity that has previously been attributed to this metabolite.


Asunto(s)
Proteínas de Arabidopsis , Arabidopsis , Citocininas/metabolismo , Glucósidos/metabolismo , Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Plantas/metabolismo , Regulación de la Expresión Génica de las Plantas
2.
Plant J ; 115(2): 470-479, 2023 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-37036146

RESUMEN

Chemical inhibitors are often implemented for the functional characterization of genes to overcome the limitations associated with genetic approaches. Although it is well established that the specificity of the compound is key to success of a pharmacological approach, off-target effects are often overlooked or simply neglected in a complex biological setting. Here we illustrate the cause and implications of such secondary effects by focusing on piperonylic acid (PA), an inhibitor of CINNAMATE-4-HYDROXYLASE (C4H) that is frequently used to investigate the involvement of lignin during plant growth and development. When supplied to plants, we found that PA is recognized as a substrate by GRETCHEN HAGEN 3.6 (GH3.6), an amido synthetase involved in the formation of the indole-3-acetic acid (IAA) conjugate IAA-Asp. By competing for the same enzyme, PA interferes with IAA conjugation, resulting in an increase in IAA concentrations in the plant. In line with the broad substrate specificity of the GH3 family of enzymes, treatment with PA increased not only IAA levels but also those of other GH3-conjugated phytohormones, namely jasmonic acid and salicylic acid. Finally, we found that interference with the endogenous function of GH3s potentially contributes to phenotypes previously observed upon PA treatment. We conclude that deregulation of phytohormone homeostasis by surrogate occupation of the conjugation machinery in the plant is likely a general phenomenon when using chemical inhibitors. Our results hereby provide a novel and important basis for future reference in studies using chemical inhibitors.


Asunto(s)
Ácidos Indolacéticos , Reguladores del Crecimiento de las Plantas , Ácidos Indolacéticos/farmacología , Benzoatos , Oxigenasas de Función Mixta/genética , Cinamatos/farmacología , Regulación de la Expresión Génica de las Plantas
3.
BMC Biol ; 20(1): 131, 2022 06 04.
Artículo en Inglés | MEDLINE | ID: mdl-35658860

RESUMEN

BACKGROUND: Generalist herbivores such as the two-spotted spider mite Tetranychus urticae thrive on a wide variety of plants and can rapidly adapt to novel hosts. What traits enable polyphagous herbivores to cope with the diversity of secondary metabolites in their variable plant diet is unclear. Genome sequencing of T. urticae revealed the presence of 17 genes that code for secreted proteins with strong homology to "intradiol ring cleavage dioxygenases (DOGs)" from bacteria and fungi, and phylogenetic analyses show that they have been acquired by horizontal gene transfer from fungi. In bacteria and fungi, DOGs have been well characterized and cleave aromatic rings in catecholic compounds between adjacent hydroxyl groups. Such compounds are found in high amounts in solanaceous plants like tomato, where they protect against herbivory. To better understand the role of this gene family in spider mites, we used a multi-disciplinary approach to functionally characterize the various T. urticae DOG genes. RESULTS: We confirmed that DOG genes were present in the T. urticae genome and performed a phylogenetic reconstruction using transcriptomic and genomic data to advance our understanding of the evolutionary history of spider mite DOG genes. We found that DOG expression differed between mites from different plant hosts and was induced in response to jasmonic acid defense signaling. In consonance with a presumed role in detoxification, expression was localized in the mite's gut region. Silencing selected DOGs expression by dsRNA injection reduced the mites' survival rate on tomato, further supporting a role in mitigating the plant defense response. Recombinant purified DOGs displayed a broad substrate promiscuity, cleaving a surprisingly wide array of aromatic plant metabolites, greatly exceeding the metabolic capacity of previously characterized microbial DOGs. CONCLUSION: Our findings suggest that the laterally acquired spider mite DOGs function as detoxification enzymes in the gut, disarming plant metabolites before they reach toxic levels. We provide experimental evidence to support the hypothesis that this proliferated gene family in T. urticae is causally linked to its ability to feed on an extremely wide range of host plants.


Asunto(s)
Dioxigenasas , Solanum lycopersicum , Tetranychidae , Animales , Dioxigenasas/genética , Herbivoria , Solanum lycopersicum/genética , Filogenia , Plantas , Tetranychidae/genética
4.
New Phytol ; 235(3): 1231-1245, 2022 08.
Artículo en Inglés | MEDLINE | ID: mdl-35460590

RESUMEN

Rice diterpenoid phytoalexins (DPs) are secondary metabolites with a well known role in resistance to foliar pathogens. As DPs are also known to be produced and exuded by rice roots, we hypothesised that they might play an important role in plant-nematode interactions, and particularly in defence against phytoparasitic nematodes. We used transcriptome analysis on rice roots to analyse the effect of infection by the root-knot nematode Meloidogyne graminicola or treatment with resistance-inducing chemical stimuli on DP biosynthesis genes, and assessed the susceptibility of mutant rice lines impaired in DP biosynthesis to M. graminicola. Moreover, we grew these mutants and their wild-type in field soil and used metabarcoding to assess the effect of impairment in DP biosynthesis on rhizosphere and root nematode communities. We show that M. graminicola suppresses DP biosynthesis genes early in its invasion process and, conversely, that resistance-inducing stimuli transiently induce the biosynthesis of DPs. Moreover, we show that loss of DPs increases susceptibility to M. graminicola. Metabarcoding on wild-type and DP-deficient plants grown in field soil reveals that DPs significantly alter the composition of rhizosphere and root nematode communities. Diterpenoid phytoalexins are important players in basal and inducible defence against nematode pathogens of rice and help shape rice-associated nematode communities.


Asunto(s)
Diterpenos , Oryza , Tylenchoidea , Animales , Diterpenos/metabolismo , Oryza/metabolismo , Enfermedades de las Plantas/genética , Rizosfera , Sesquiterpenos , Suelo , Fitoalexinas
5.
J Exp Bot ; 73(22): 7564-7581, 2022 12 08.
Artículo en Inglés | MEDLINE | ID: mdl-36124630

RESUMEN

Induced resistance (IR), a phenotypic state induced by an exogenous stimulus and characterized by enhanced resistance to future (a)biotic challenge, is an important component of plant immunity. Numerous IR-inducing stimuli have been described in various plant species, but relatively little is known about 'core' systemic responses shared by these distinct IR stimuli and the effects of IR on plant-associated microbiota. In this study, rice (Oryza sativa) leaves were treated with four distinct IR stimuli (ß-aminobutyric acid, acibenzolar-S-methyl, dehydroascorbic acid, and piperonylic acid) capable of inducing systemic IR against the root-knot nematode Meloidogyne graminicola and evaluated their effect on the root transcriptome and exudome, and root-associated nematode communities. Our results reveal shared transcriptional responses-notably induction of jasmonic acid and phenylpropanoid metabolism-and shared alterations to the exudome that include increased amino acid, benzoate, and fatty acid exudation. In rice plants grown in soil from a rice field, IR stimuli significantly affected the composition of rhizosphere nematode communities 3 d after treatment, but by 14 d after treatment these changes had largely reverted. Notably, IR stimuli did not reduce nematode diversity, which suggests that IR might offer a sustainable option for managing plant-parasitic nematodes.


Asunto(s)
Oryza , Oryza/genética
6.
New Phytol ; 230(6): 2275-2291, 2021 06.
Artículo en Inglés | MEDLINE | ID: mdl-33728703

RESUMEN

The phenylpropanoid pathway serves a central role in plant metabolism, providing numerous compounds involved in diverse physiological processes. Most carbon entering the pathway is incorporated into lignin. Although several phenylpropanoid pathway mutants show seedling growth arrest, the role for lignin in seedling growth and development is unexplored. We use complementary pharmacological and genetic approaches to block CINNAMATE-4-HYDROXYLASE (C4H) functionality in Arabidopsis seedlings and a set of molecular and biochemical techniques to investigate the underlying phenotypes. Blocking C4H resulted in reduced lateral rooting and increased adventitious rooting apically in the hypocotyl. These phenotypes coincided with an inhibition in AUX transport. The upstream accumulation in cis-cinnamic acid was found to be likely to cause polar AUX transport inhibition. Conversely, a downstream depletion in lignin perturbed phloem-mediated AUX transport. Restoring lignin deposition effectively reestablished phloem transport and, accordingly, AUX homeostasis. Our results show that the accumulation of bioactive intermediates and depletion in lignin jointly cause the aberrant phenotypes upon blocking C4H, and demonstrate that proper deposition of lignin is essential for the establishment of AUX distribution in seedlings. Our data position the phenylpropanoid pathway and lignin in a new physiological framework, consolidating their importance in plant growth and development.


Asunto(s)
Cinamatos , Plantones , Regulación de la Expresión Génica de las Plantas , Ácidos Indolacéticos , Raíces de Plantas/metabolismo , Plantas Modificadas Genéticamente/metabolismo , Plantones/metabolismo , Transcinamato 4-Monooxigenasa/genética , Transcinamato 4-Monooxigenasa/metabolismo
7.
Plant Cell Environ ; 44(9): 3122-3139, 2021 09.
Artículo en Inglés | MEDLINE | ID: mdl-34053100

RESUMEN

Although many phenylpropanoid pathway-derived molecules act as physical and chemical barriers to pests and pathogens, comparatively little is known about their role in regulating plant immunity. To explore this research field, we transiently perturbed the phenylpropanoid pathway through application of the CINNAMIC ACID-4-HYDROXYLASE (C4H) inhibitor piperonylic acid (PA). Using bioassays involving diverse pests and pathogens, we show that transient C4H inhibition triggers systemic, broad-spectrum resistance in higher plants without affecting growth. PA treatment enhances tomato (Solanum lycopersicum) resistance in field and laboratory conditions, thereby illustrating the potential of phenylpropanoid pathway perturbation in crop protection. At the molecular level, transcriptome and metabolome analyses reveal that transient C4H inhibition in tomato reprograms phenylpropanoid and flavonoid metabolism, systemically induces immune signalling and pathogenesis-related genes, and locally affects reactive oxygen species metabolism. Furthermore, C4H inhibition primes cell wall modification and phenolic compound accumulation in response to root-knot nematode infection. Although PA treatment induces local accumulation of the phytohormone salicylic acid, the PA resistance phenotype is preserved in tomato plants expressing the salicylic acid-degrading NahG construct. Together, our results demonstrate that transient phenylpropanoid pathway perturbation is a conserved inducer of plant resistance and thus highlight the crucial regulatory role of this pathway in plant immunity.


Asunto(s)
Benzoatos/farmacología , Resistencia a la Enfermedad/efectos de los fármacos , Animales , Botrytis , Flavonoides/metabolismo , Perfilación de la Expresión Génica , Solanum lycopersicum/efectos de los fármacos , Solanum lycopersicum/inmunología , Solanum lycopersicum/microbiología , Redes y Vías Metabólicas/efectos de los fármacos , Nematodos/metabolismo , Enfermedades de las Plantas/inmunología , Enfermedades de las Plantas/microbiología , Enfermedades de las Plantas/parasitología , Reguladores del Crecimiento de las Plantas/metabolismo , Raíces de Plantas/inmunología , Raíces de Plantas/parasitología , Pseudomonas syringae , Transcriptoma
8.
Plant Physiol ; 179(1): 74-87, 2019 01.
Artículo en Inglés | MEDLINE | ID: mdl-30301776

RESUMEN

Polyploidization has played a key role in plant breeding and crop improvement. Although its potential to increase biomass yield is well described, the effect of polyploidization on biomass composition has largely remained unexplored. Here, we generated a series of Arabidopsis (Arabidopsis thaliana) plants with different somatic ploidy levels (2n, 4n, 6n, and 8n) and performed rigorous phenotypic characterization. Kinematic analysis showed that polyploids developed slower compared to diploids; however, tetra- and hexaploids, but not octaploids, generated larger rosettes due to delayed flowering. In addition, morphometric analysis of leaves showed that polyploidy affected epidermal pavement cells, with increased cell size and reduced cell number per leaf blade with incrementing ploidy. However, the inflorescence stem dry weight was highest in tetraploids. Cell wall characterization revealed that the basic somatic ploidy level negatively correlated with lignin and cellulose content, and positively correlated with matrix polysaccharide content (i.e. hemicellulose and pectin) in the stem tissue. In addition, higher ploidy plants displayed altered sugar composition. Such effects were linked to the delayed development of polyploids. Moreover, the changes in polyploid cell wall composition promoted saccharification yield. The results of this study indicate that induction of polyploidy is a promising breeding strategy to further tailor crops for biomass production.


Asunto(s)
Arabidopsis/genética , Desarrollo de la Planta/genética , Poliploidía , Arabidopsis/crecimiento & desarrollo , Biomasa , Pared Celular/genética , Pared Celular/metabolismo , Celulosa/metabolismo , Lignina/metabolismo , Fenotipo , Hojas de la Planta
9.
J Exp Bot ; 70(21): 6293-6304, 2019 11 18.
Artículo en Inglés | MEDLINE | ID: mdl-31504728

RESUMEN

Agrochemicals provide vast potential to improve plant productivity, because they are easy to implement at low cost while not being restricted by species barriers as compared with breeding strategies. Despite the general interest, only a few compounds with growth-promoting activity have been described so far. Here, we add cis-cinnamic acid (c-CA) to the small portfolio of existing plant growth stimulators. When applied at low micromolar concentrations to Arabidopsis roots, c-CA stimulates both cell division and cell expansion in leaves. Our data support a model explaining the increase in shoot biomass as the consequence of a larger root system, which allows the plant to explore larger areas for resources. The requirement of the cis-configuration for the growth-promoting activity of CA was validated by implementing stable structural analogs of both cis- and trans-CA in this study. In a complementary approach, we used specific light conditions to prevent cis/trans-isomerization of CA during the experiment. In both cases, the cis-form stimulated plant growth, whereas the trans-form was inactive. Based on these data, we conclude that c-CA is an appealing lead compound representing a novel class of growth-promoting agrochemicals. Unraveling the underlying molecular mechanism could lead to the development of innovative strategies for boosting plant biomass.


Asunto(s)
Cinamatos/farmacología , Desarrollo de la Planta/efectos de los fármacos , Arabidopsis/efectos de los fármacos , Arabidopsis/crecimiento & desarrollo , Ácidos Carboxílicos/farmacología , Cinamatos/química , Ciclopropanos/farmacología , Ácidos Indolacéticos/farmacología , Isomerismo , Nicotiana/efectos de los fármacos , Nicotiana/crecimiento & desarrollo
10.
Mol Plant Microbe Interact ; 31(1): 112-124, 2018 01.
Artículo en Inglés | MEDLINE | ID: mdl-29094648

RESUMEN

The salivary protein repertoire released by the herbivorous pest Tetranychus urticae is assumed to hold keys to its success on diverse crops. We report on a spider mite-specific protein family that is expanded in T. urticae. The encoding genes have an expression pattern restricted to the anterior podocephalic glands, while peptide fragments were found in the T. urticae secretome, supporting the salivary nature of these proteins. As peptide fragments were identified in a host-dependent manner, we designated this family as the SHOT (secreted host-responsive protein of Tetranychidae) family. The proteins were divided in three groups based on sequence similarity. Unlike TuSHOT3 genes, TuSHOT1 and TuSHOT2 genes were highly expressed when feeding on a subset of family Fabaceae, while expression was depleted on other hosts. TuSHOT1 and TuSHOT2 expression was induced within 24 h after certain host transfers, pointing toward transcriptional plasticity rather than selection as the cause. Transfer from an 'inducer' to a 'noninducer' plant was associated with slow yet strong downregulation of TuSHOT1 and TuSHOT2, occurring over generations rather than hours. This asymmetric on and off regulation points toward host-specific effects of SHOT proteins, which is further supported by the diversity of SHOT genes identified in Tetranychidae with a distinct host repertoire.


Asunto(s)
Interacciones Huésped-Parásitos/genética , Familia de Multigenes , Proteínas y Péptidos Salivales/genética , Tetranychidae/genética , Transcripción Genética , Secuencia de Aminoácidos , Animales , Regulación de la Expresión Génica de las Plantas , Péptidos/química , Péptidos/metabolismo , Filogenia , Plantas/genética , Plantas/parasitología , Proteómica , ARN Mensajero/genética , ARN Mensajero/metabolismo , Saliva/metabolismo , Factores de Tiempo
11.
Plant Physiol ; 173(1): 552-565, 2017 01.
Artículo en Inglés | MEDLINE | ID: mdl-27837086

RESUMEN

Auxin steers numerous physiological processes in plants, making the tight control of its endogenous levels and spatiotemporal distribution a necessity. This regulation is achieved by different mechanisms, including auxin biosynthesis, metabolic conversions, degradation, and transport. Here, we introduce cis-cinnamic acid (c-CA) as a novel and unique addition to a small group of endogenous molecules affecting in planta auxin concentrations. c-CA is the photo-isomerization product of the phenylpropanoid pathway intermediate trans-CA (t-CA). When grown on c-CA-containing medium, an evolutionary diverse set of plant species were shown to exhibit phenotypes characteristic for high auxin levels, including inhibition of primary root growth, induction of root hairs, and promotion of adventitious and lateral rooting. By molecular docking and receptor binding assays, we showed that c-CA itself is neither an auxin nor an anti-auxin, and auxin profiling data revealed that c-CA does not significantly interfere with auxin biosynthesis. Single cell-based auxin accumulation assays showed that c-CA, and not t-CA, is a potent inhibitor of auxin efflux. Auxin signaling reporters detected changes in spatiotemporal distribution of the auxin response along the root of c-CA-treated plants, and long-distance auxin transport assays showed no inhibition of rootward auxin transport. Overall, these results suggest that the phenotypes of c-CA-treated plants are the consequence of a local change in auxin accumulation, induced by the inhibition of auxin efflux. This work reveals a novel mechanism how plants may regulate auxin levels and adds a novel, naturally occurring molecule to the chemical toolbox for the studies of auxin homeostasis.


Asunto(s)
Cinamatos/metabolismo , Ácidos Indolacéticos/metabolismo , Raíces de Plantas/efectos de los fármacos , Raíces de Plantas/crecimiento & desarrollo , Arabidopsis/efectos de los fármacos , Arabidopsis/crecimiento & desarrollo , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Bryopsida/efectos de los fármacos , Bryopsida/crecimiento & desarrollo , Cinamatos/química , Cinamatos/farmacología , Ciclina B/genética , Ciclina B/metabolismo , Regulación de la Expresión Génica de las Plantas , Isomerismo , Raíces de Plantas/metabolismo , Plantas Modificadas Genéticamente , Proteínas Qa-SNARE/genética , Proteínas Qa-SNARE/metabolismo , Selaginellaceae/efectos de los fármacos , Selaginellaceae/crecimiento & desarrollo , Transducción de Señal
12.
Plant Cell ; 27(3): 695-710, 2015 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-25700483

RESUMEN

Lignin is an aromatic polymer derived from the combinatorial coupling of monolignol radicals in the cell wall. Recently, various glycosylated lignin oligomers have been revealed in Arabidopsis thaliana. Given that monolignol oxidation and monolignol radical coupling are known to occur in the apoplast, and glycosylation in the cytoplasm, it raises questions about the subcellular localization of glycosylated lignin oligomer biosynthesis and their storage. By metabolite profiling of Arabidopsis leaf vacuoles, we show that the leaf vacuole stores a large number of these small glycosylated lignin oligomers. Their structural variety and the incorporation of alternative monomers, as observed in Arabidopsis mutants with altered monolignol biosynthesis, indicate that they are all formed by combinatorial radical coupling. In contrast to the common believe that combinatorial coupling is restricted to the apoplast, we hypothesized that the aglycones of these compounds are made within the cell. To investigate this, leaf protoplast cultures were cofed with 13C6-labeled coniferyl alcohol and a 13C4-labeled dimer of coniferyl alcohol. Metabolite profiling of the cofed protoplasts provided strong support for the occurrence of intracellular monolignol coupling. We therefore propose a metabolic pathway involving intracellular combinatorial coupling of monolignol radicals, followed by oligomer glycosylation and vacuolar import, which shares characteristics with both lignin and lignan biosynthesis.


Asunto(s)
Arabidopsis/metabolismo , Lignina/metabolismo , Hojas de la Planta/metabolismo , Vacuolas/metabolismo , Vías Biosintéticas , Cromatografía Liquida , Ésteres , Glicosilación , Lignina/biosíntesis , Lignina/química , Malatos/metabolismo , Espectrometría de Masas , Modelos Biológicos , Fenoles/metabolismo , Protoplastos/metabolismo
13.
Physiol Plant ; 164(1): 27-44, 2018 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-29430656

RESUMEN

Global warming and the consequent climate change is one of the major environmental challenges we are facing today. The driving force behind the rise in temperature is our fossil-based economy, which releases massive amounts of the greenhouse gas carbon dioxide into the atmosphere. In order to reduce greenhouse gas emission, we need to scale down our dependency on fossil resources, implying that we need other sources for energy and chemicals to feed our economy. Here, plants have an important role to play; by means of photosynthesis, plants capture solar energy to split water and fix carbon derived from atmospheric carbon dioxide. A significant fraction of the fixed carbon ends up as polysaccharides in the plant cell wall. Fermentable sugars derived from cell wall polysaccharides form an ideal carbon source for the production of bio-platform molecules. However, a major limiting factor in the use of plant biomass as feedstock for the bio-based economy is the complexity of the plant cell wall and its recalcitrance towards deconstruction. To facilitate the release of fermentable sugars during downstream biomass processing, the composition and structure of the cell wall can be engineered. Different strategies to reduce cell wall recalcitrance will be described in this review. The ultimate goal is to obtain a tailor-made biomass, derived from plants with a cell wall optimized for particular industrial or agricultural applications, without affecting plant growth and development.


Asunto(s)
Células Vegetales/metabolismo , Azúcares/metabolismo , Biomasa , Carbono/metabolismo , Dióxido de Carbono/metabolismo , Pared Celular/metabolismo , Edulcorantes
14.
Mol Cell Proteomics ; 15(12): 3594-3613, 2016 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-27703040

RESUMEN

The two-spotted spider mite Tetranychus urticae is an extremely polyphagous crop pest. Alongside an unparalleled detoxification potential for plant secondary metabolites, it has recently been shown that spider mites can attenuate or even suppress plant defenses. Salivary constituents, notably effectors, have been proposed to play an important role in manipulating plant defenses and might determine the outcome of plant-mite interactions. Here, the proteomic composition of saliva from T. urticae lines adapted to various host plants-bean, maize, soy, and tomato-was analyzed using a custom-developed feeding assay coupled with nano-LC tandem mass spectrometry. About 90 putative T. urticae salivary proteins were identified. Many are of unknown function, and in numerous cases belonging to multimembered gene families. RNAseq expression analysis revealed that many genes coding for these salivary proteins were highly expressed in the proterosoma, the mite body region that includes the salivary glands. A subset of genes encoding putative salivary proteins was selected for whole-mount in situ hybridization, and were found to be expressed in the anterior and dorsal podocephalic glands. Strikingly, host plant dependent expression was evident for putative salivary proteins, and was further studied in detail by micro-array based genome-wide expression profiling. This meta-analysis revealed for the first time the salivary protein repertoire of a phytophagous chelicerate. The availability of this salivary proteome will assist in unraveling the molecular interface between phytophagous mites and their host plants, and may ultimately facilitate the development of mite-resistant crops. Furthermore, the technique used in this study is a time- and resource-efficient method to examine the salivary protein composition of other small arthropods for which saliva or salivary glands cannot be isolated easily.


Asunto(s)
Productos Agrícolas/parasitología , Proteómica/métodos , Proteínas y Péptidos Salivales/metabolismo , Tetranychidae/fisiología , Animales , Proteínas de Artrópodos/metabolismo , Cromatografía Liquida , Productos Agrícolas/genética , Regulación de la Expresión Génica , Especificidad del Huésped , Interacciones Huésped-Parásitos , Proteínas y Péptidos Salivales/genética , Análisis de Secuencia de ARN/métodos , Espectrometría de Masas en Tándem , Tetranychidae/metabolismo , Distribución Tisular
15.
Plant Physiol ; 172(1): 198-220, 2016 09.
Artículo en Inglés | MEDLINE | ID: mdl-27485881

RESUMEN

Plant secondary-thickened cell walls are characterized by the presence of lignin, a recalcitrant and hydrophobic polymer that provides mechanical strength and ensures long-distance water transport. Exactly the recalcitrance and hydrophobicity of lignin put a burden on the industrial processing efficiency of lignocellulosic biomass. Both forward and reverse genetic strategies have been used intensively to unravel the molecular mechanism of lignin deposition. As an alternative strategy, we introduce here a forward chemical genetic approach to find candidate inhibitors of lignification. A high-throughput assay to assess lignification in Arabidopsis (Arabidopsis thaliana) seedlings was developed and used to screen a 10-k library of structurally diverse, synthetic molecules. Of the 73 compounds that reduced lignin deposition, 39 that had a major impact were retained and classified into five clusters based on the shift they induced in the phenolic profile of Arabidopsis seedlings. One representative compound of each cluster was selected for further lignin-specific assays, leading to the identification of an aromatic compound that is processed in the plant into two fragments, both having inhibitory activity against lignification. One fragment, p-iodobenzoic acid, was further characterized as a new inhibitor of CINNAMATE 4-HYDROXYLASE, a key enzyme of the phenylpropanoid pathway synthesizing the building blocks of the lignin polymer. As such, we provide proof of concept of this chemical biology approach to screen for inhibitors of lignification and present a broad array of putative inhibitors of lignin deposition for further characterization.


Asunto(s)
Arabidopsis/metabolismo , Yodobenzoatos/farmacología , Lignina/metabolismo , Transcinamato 4-Monooxigenasa/antagonistas & inhibidores , Arabidopsis/citología , Arabidopsis/genética , Vías Biosintéticas/efectos de los fármacos , Vías Biosintéticas/genética , Supervivencia Celular/efectos de los fármacos , Cromatografía Líquida de Alta Presión/métodos , Análisis por Conglomerados , Inhibidores Enzimáticos/química , Inhibidores Enzimáticos/clasificación , Inhibidores Enzimáticos/farmacología , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Ensayos Analíticos de Alto Rendimiento/métodos , Yodobenzoatos/química , Espectrometría de Masas , Estructura Molecular , Propanoles/metabolismo , Plantones/enzimología , Plantones/genética , Plantones/metabolismo , Transcinamato 4-Monooxigenasa/genética , Transcinamato 4-Monooxigenasa/metabolismo
16.
Plant Physiol ; 172(2): 874-888, 2016 10.
Artículo en Inglés | MEDLINE | ID: mdl-27506238

RESUMEN

The phenylpropanoid 3,4-(methylenedioxy)cinnamic acid (MDCA) is a plant-derived compound first extracted from roots of Asparagus officinalis and further characterized as an allelochemical. Later on, MDCA was identified as an efficient inhibitor of 4-COUMARATE-CoA LIGASE (4CL), a key enzyme of the general phenylpropanoid pathway. By blocking 4CL, MDCA affects the biosynthesis of many important metabolites, which might explain its phytotoxicity. To decipher the molecular basis of the allelochemical activity of MDCA, we evaluated the effect of this compound on Arabidopsis thaliana seedlings. Metabolic profiling revealed that MDCA is converted in planta into piperonylic acid (PA), an inhibitor of CINNAMATE-4-HYDROXYLASE (C4H), the enzyme directly upstream of 4CL. The inhibition of C4H was also reflected in the phenolic profile of MDCA-treated plants. Treatment of in vitro grown plants resulted in an inhibition of primary root growth and a proliferation of lateral and adventitious roots. These observed growth defects were not the consequence of lignin perturbation, but rather the result of disturbing auxin homeostasis. Based on DII-VENUS quantification and direct measurement of cellular auxin transport, we concluded that MDCA disturbs auxin gradients by interfering with auxin efflux. In addition, mass spectrometry was used to show that MDCA triggers auxin biosynthesis, conjugation, and catabolism. A similar shift in auxin homeostasis was found in the c4h mutant ref3-2, indicating that MDCA triggers a cross talk between the phenylpropanoid and auxin biosynthetic pathways independent from the observed auxin efflux inhibition. Altogether, our data provide, to our knowledge, a novel molecular explanation for the phytotoxic properties of MDCA.


Asunto(s)
Cinamatos/farmacología , Homeostasis/efectos de los fármacos , Ácidos Indolacéticos/metabolismo , Lignina/biosíntesis , Fenilpropionatos/farmacología , Arabidopsis/efectos de los fármacos , Arabidopsis/genética , Arabidopsis/metabolismo , Benzoatos/metabolismo , Benzoatos/farmacología , Vías Biosintéticas/efectos de los fármacos , Cinamatos/química , Cinamatos/metabolismo , Coenzima A Ligasas/antagonistas & inhibidores , Coenzima A Ligasas/metabolismo , Relación Dosis-Respuesta a Droga , Espectrometría de Masas , Microscopía Confocal , Fenilpropionatos/química , Fenilpropionatos/metabolismo , Raíces de Plantas/efectos de los fármacos , Raíces de Plantas/genética , Raíces de Plantas/metabolismo , Plantas Modificadas Genéticamente , Plantones/efectos de los fármacos , Plantones/genética , Plantones/crecimiento & desarrollo , Plantones/metabolismo , Transcinamato 4-Monooxigenasa/antagonistas & inhibidores , Transcinamato 4-Monooxigenasa/metabolismo
17.
Plant Cell ; 26(3): 929-45, 2014 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-24685999

RESUMEN

Plant metabolomics is increasingly used for pathway discovery and to elucidate gene function. However, the main bottleneck is the identification of the detected compounds. This is more pronounced for secondary metabolites as many of their pathways are still underexplored. Here, an algorithm is presented in which liquid chromatography-mass spectrometry profiles are searched for pairs of peaks that have mass and retention time differences corresponding with those of substrates and products from well-known enzymatic reactions. Concatenating the latter peak pairs, called candidate substrate-product pairs (CSPP), into a network displays tentative (bio)synthetic routes. Starting from known peaks, propagating the network along these routes allows the characterization of adjacent peaks leading to their structure prediction. As a proof-of-principle, this high-throughput cheminformatics procedure was applied to the Arabidopsis thaliana leaf metabolome where it allowed the characterization of the structures of 60% of the profiled compounds. Moreover, based on searches in the Chemical Abstract Service database, the algorithm led to the characterization of 61 compounds that had never been described in plants before. The CSPP-based annotation was confirmed by independent MS(n) experiments. In addition to being high throughput, this method allows the annotation of low-abundance compounds that are otherwise not amenable to isolation and purification. This method will greatly advance the value of metabolomics in systems biology.


Asunto(s)
Arabidopsis/metabolismo , Cromatografía de Fase Inversa , Metabolómica , Espectrometría de Masa por Ionización de Electrospray , Especificidad por Sustrato
18.
Plant Cell ; 26(9): 3775-91, 2014 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-25238751

RESUMEN

Phenylcoumaran benzylic ether reductase (PCBER) is one of the most abundant proteins in poplar (Populus spp) xylem, but its biological role has remained obscure. In this work, metabolite profiling of transgenic poplar trees downregulated in PCBER revealed both the in vivo substrate and product of PCBER. Based on mass spectrometry and NMR data, the substrate was identified as a hexosylated 8-5-coupling product between sinapyl alcohol and guaiacylglycerol, and the product was identified as its benzyl-reduced form. This activity was confirmed in vitro using a purified recombinant PCBER expressed in Escherichia coli. Assays performed on 20 synthetic substrate analogs revealed the enzyme specificity. In addition, the xylem of PCBER-downregulated trees accumulated over 2000-fold higher levels of cysteine adducts of monolignol dimers. These compounds could be generated in vitro by simple oxidative coupling assays involving monolignols and cysteine. Altogether, our data suggest that the function of PCBER is to reduce phenylpropanoid dimers in planta to form antioxidants that protect the plant against oxidative damage. In addition to describing the catalytic activity of one of the most abundant enzymes in wood, we provide experimental evidence for the antioxidant role of a phenylpropanoid coupling product in planta.


Asunto(s)
Oxidorreductasas/metabolismo , Populus/enzimología , Xilema/enzimología , Aminoácidos/metabolismo , Pared Celular/metabolismo , Cisteína/metabolismo , Regulación hacia Abajo , Pruebas de Enzimas , Immunoblotting , Lignanos/biosíntesis , Lignanos/química , Espectroscopía de Resonancia Magnética , Espectrometría de Masas , Datos de Secuencia Molecular , Oxidación-Reducción , Estrés Oxidativo , Oxidorreductasas/química , Fenotipo , Plantas Modificadas Genéticamente , Reproducibilidad de los Resultados , Especificidad por Sustrato
19.
BMC Dev Biol ; 16: 10, 2016 Apr 28.
Artículo en Inglés | MEDLINE | ID: mdl-27122249

RESUMEN

BACKGROUND: Detailed descriptions of the early development of parasitic nematodes are seldom available. The embryonic development of the plant-parasitic nematode Meloidogyne incognita was studied, focusing on the early events. RESULTS: A fixed pattern of repeated cell cleavages was observed, resulting in the appearance of the six founder cells 3 days after the first cell division. Gastrulation, characterized by the translocation of cells from the ventral side to the center of the embryo, was seen 1 day later. Approximately 10 days after the first cell division a rapidly elongating two-fold stage was reached. The fully developed second stage juvenile hatched approximately 21 days after the first cell division. CONCLUSIONS: When compared to the development of the free-living nematode Caenorhabditis elegans, the development of M. incognita occurs approximately 35 times more slowly. Furthermore, M. incognita differs from C. elegans in the order of cell divisions, and the early cleavage patterns of the germ line cells. However, cytoplasmic ruffling and nuclear migration prior to the first cell division as well as the localization of microtubules are similar between C. elegans and M. incognita.


Asunto(s)
Desarrollo Embrionario , Raíces de Plantas/parasitología , Tylenchoidea/embriología , Animales , División Celular , Linaje de la Célula , Núcleo Celular/metabolismo , Citoesqueleto/metabolismo , ADN/metabolismo , Embrión no Mamífero/citología , Embrión no Mamífero/metabolismo , Femenino , Gastrulación , Óvulo/citología , Filogenia , Tylenchoidea/citología
20.
Mol Plant Microbe Interact ; 28(5): 519-33, 2015 May.
Artículo en Inglés | MEDLINE | ID: mdl-25608179

RESUMEN

The nonprotein amino acid ß-aminobutyric acid (BABA) is known to protect plants against various pathogens. The mode of action is relatively diverse and specific in different plant-pathogen systems. To extend the analysis of the mode of action of BABA to plant-parasitic nematodes in monocot plants, we evaluated the effect of BABA against the root-knot nematode (RKN) Meloidogyne graminicola in rice. BABA treatment of rice plants inhibited nematode penetration and resulted in delayed nematode and giant cell development. BABA-induced resistance (BABA-IR) was still functional in mutants or transgenics defective in salicylic acid biosynthesis and response or abscisic acid (ABA) response. Pharmacological inhibition of jasmonic acid (JA) and ethylene (ET) biosynthesis indicated that BABA-IR against rice RKN likely occurs independent of JA and ET. However, histochemical and biochemical quantification in combination with quantitative real-time reverse transcription-polymerase chain reaction data suggest that BABA protects rice against RKN through the activation of basal defense mechanisms of the plant, such as reactive oxygen species accumulation, lignin formation, and callose deposition.


Asunto(s)
Aminobutiratos/farmacología , Nematodos/fisiología , Oryza/inmunología , Enfermedades de las Plantas/inmunología , Reguladores del Crecimiento de las Plantas/metabolismo , Inmunidad de la Planta/efectos de los fármacos , Ácido Abscísico/metabolismo , Animales , Ciclopentanos/metabolismo , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Glucanos/metabolismo , Lignina/metabolismo , Modelos Biológicos , Mutación , Nematodos/crecimiento & desarrollo , Oryza/citología , Oryza/efectos de los fármacos , Oryza/genética , Oxilipinas/metabolismo , Raíces de Plantas/citología , Raíces de Plantas/efectos de los fármacos , Raíces de Plantas/genética , Raíces de Plantas/inmunología , Plantas Modificadas Genéticamente , Especies Reactivas de Oxígeno/metabolismo , Ácido Salicílico/metabolismo
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