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1.
Proc Natl Acad Sci U S A ; 120(10): e2220131120, 2023 Mar 07.
Artículo en Inglés | MEDLINE | ID: mdl-36848575

RESUMEN

Hydroperoxides are formed in the atmospheric oxidation of volatile organic compounds, in the combustion autoxidation of fuel, in the cold environment of the interstellar medium, and also in some catalytic reactions. They play crucial roles in the formation and aging of secondary organic aerosols and in fuel autoignition. However, the concentration of organic hydroperoxides is seldom measured, and typical estimates have large uncertainties. In this work, we developed a mild and environmental-friendly method for the synthesis of alkyl hydroperoxides (ROOH) with various structures, and we systematically measured the absolute photoionization cross-sections (PICSs) of the ROOHs using synchrotron vacuum ultraviolet-photoionization mass spectrometry (SVUV-PIMS). A chemical titration method was combined with an SVUV-PIMS measurement to obtain the PICS of 4-hydroperoxy-2-pentanone, a typical molecule for combustion and atmospheric autoxidation ketohydroperoxides (KHPs). We found that organic hydroperoxide cations are largely dissociated by loss of OOH. This fingerprint was used for the identification and accurate quantification of the organic peroxides, and it can therefore be used to improve models for autoxidation chemistry. The synthesis method and photoionization dataset for organic hydroperoxides are useful for studying the chemistry of hydroperoxides and the reaction kinetics of the hydroperoxy radicals and for developing and evaluating kinetic models for the atmospheric autoxidation and combustion autoxidation of the organic compounds.

2.
Nano Lett ; 2024 Jun 05.
Artículo en Inglés | MEDLINE | ID: mdl-38837959

RESUMEN

Propane dehydrogenation (PDH) serves as a pivotal intentional technique to produce propylene. The stability of PDH catalysts is generally restricted by the readsorption of propylene which can subsequently undergo side reactions for coke formation. Herein, we demonstrate an ultrastable PDH catalyst by encapsulating PtIn clusters within silicalite-1 which serves as an efficient promoter for olefin desorption. The mean lifetime of PtIn@S-1 (S-1, silicalite-1) was calculated as 37317 h with high propylene selectivity of >97% at 580 °C with a weight hourly space velocity (WHSV) of 4.7 h-1. With an ultrahigh WHSV of 1128 h-1, which pushed the catalyst away from the equilibrium conversion to 13.3%, PtIn@S-1 substantially outperformed other reported PDH catalysts in terms of mean lifetime (32058 h), reaction rates (3.42 molpropylene gcat-1 h-1 and 341.90 molpropylene gPt-1 h-1), and total turnover number (14387.30 kgpropylene gcat-1). The developed catalyst is likely to lead the way to scalable PDH applications.

3.
J Am Chem Soc ; 146(19): 13571-13579, 2024 May 15.
Artículo en Inglés | MEDLINE | ID: mdl-38710105

RESUMEN

Based on quantum mechanically guided experiments that observed elusive intermediates in the domain of inception that lies between large molecules and soot particles, we provide a new mechanism for the formation of carbonaceous particles from gas-phase molecular precursors. We investigated the clustering behavior of resonantly stabilized radicals (RSRs) and their interactions with unsaturated hydrocarbons through a combination of gas-phase reaction experiments and theoretical calculations. Our research directly observed a sequence of covalently bound clusters (CBCs) as key intermediates in the evolution from small RSRs, such as benzyl (C7H7), indenyl (C9H7), 1-methylnaphthyl (1-C11H9), and 2-methylnaphthyl (2-C11H9), to large polycyclic aromatic hydrocarbons (PAHs) consisting of 28 to 55 carbons. We found that hydrogen abstraction and RSR addition drive the formation and growth of CBCs, leading to progressive H-losses, the generation of large PAHs and PAH radicals, and the formation of white smoke (incipient carbonaceous particles). This mechanism of progressive H-losses from CBCs (PHLCBC) elucidates the crucial relationship among RSRs, CBCs, and PAHs, and this study provides an unprecedentedly seamless path of observed assembly from small RSRs to large nanoparticles. Understanding the PHLCBC mechanism over a wide temperature range may enhance the accuracy of multiscale models of soot formation, guide the synthesis of carbonaceous nanomaterials, and deepen our understanding of the origin and evolution of carbon within our galaxy.

4.
J Phys Chem A ; 128(34): 7105-7113, 2024 Aug 29.
Artículo en Inglés | MEDLINE | ID: mdl-39151122

RESUMEN

Self-reaction of propargyl (C3H3) radical is the main pathway to benzene, the formation of which is the rate-controlling step toward the formation of polycyclic aromatic hydrocarbons (PAHs) and soot. Oxidation of C3H3 is a promising strategy to inhibit the formation of hazardous PAHs and soot. In the present study, we studied the C3H3 + O2 reaction from 650 to 1100 K in a laminar flow reactor and identified the intermediates and products by synchrotron VUV photoionization mass spectrometry. 2-Propynal, ethenone, formaldehyde, CO, CO2, C2H2, C2H4, and C3O2 were identified. Among them, 2-propynal, ethenone, and formaldehyde provided direct evidence for the branching reaction of C3H3 + O2 → HCCCHO + OH, C3H3 + O2 → H2CCO + CHO, and C3H3 + O2 → H2CO + CHCO, respectively. Potential energy surface calculation and mechanistic analysis of the C3O2 formations implied that C3H3 + O2 → CCCHO + H2O and C3H3 + O2 → HCCCO + H2O could occur, despite lacking direct observations of CCCHO and HCCCO radicals. The formation of ethenone and CO suggested the occurrence of the two CO elimination channels. We incorporated these validated reactions and the corresponding rate coefficients in the kinetic model of NUIGMech1.3, and the simulation showed obvious improvements toward the measured mole fractions of C3H3 and H2CCO, suggesting that the new C3H3 + O2 reaction channels were crucial in the overall combustion modeling of the important intermediate propyne (C3H4).

5.
Angew Chem Int Ed Engl ; 63(23): e202404983, 2024 Jun 03.
Artículo en Inglés | MEDLINE | ID: mdl-38563622

RESUMEN

Syngas conversion serves as a gas-to-liquid technology to produce liquid fuels and valuable chemicals from coal, natural gas, or biomass. During syngas conversion, sintering is known to deactivate the catalyst owing to the loss of active surface area. However, the growth of nanoparticles might induce the formation of new active sites such as grain boundaries (GBs) which perform differently from the original nanoparticles. Herein, we reported a unique Cu-based catalyst, Cu nanoparticles with in situ generated GBs confined in zeolite Y (denoted as activated Cu/Y), which exhibited a high selectivity for C5+ hydrocarbons (65.3 C%) during syngas conversion. Such high selectivity for long-chain products distinguished activated Cu/Y from typical copper-based catalysts which mainly catalyze methanol synthesis. This unique performance was attributed to the GBs, while the zeolite assisted the stabilization through spatial confinement. Specifically, the GBs enabled H-assisted dissociation of CO and subsequent hydrogenation into CHx*. CHx* species not only serve as the initiator but also directly polymerize on Cu GBs, known as the carbide mechanism. Meanwhile, the synergy of GBs and their vicinal low-index facets led to the CO insertion where non-dissociative adsorbed CO on low-index facets migrated to GBs and inserted into the metal-alkyl bond for the chain growth.

6.
Angew Chem Int Ed Engl ; 63(24): e202404952, 2024 Jun 10.
Artículo en Inglés | MEDLINE | ID: mdl-38588012

RESUMEN

The vast bulk of polystyrene (PS), a major type of plastic polymers, ends up in landfills, which takes up to thousands of years to decompose in nature. Chemical recycling promises to enable lower-energy pathways and minimal environmental impacts compared with traditional incineration and mechanical recycling. Herein, we demonstrated that methanol as a hydrogen supplier assisted the depolymerization of PS (denoted as PS-MAD) into alkylbenzenes over a heterogeneous catalyst composed of Ru nanoparticles on SiO2. PS-MAD achieved a high yield of liquid products which accounted for 93.2 wt % of virgin PS at 280 °C for 6 h with the production rate of 118.1 mmolcarbon gcatal. -1 h-1. The major components were valuable alkylbenzenes (monocyclic aromatics and diphenyl alkanes), the sum of which occupied 84.3 wt % of liquid products. According to mechanistic studies, methanol decomposition dominates the hydrogen supply during PS-MAD, thereby restraining PS aromatization which generates by-products of fused polycyclic arenes and polyphenylenes.

7.
Clin Exp Rheumatol ; 2023 Nov 23.
Artículo en Inglés | MEDLINE | ID: mdl-38019163

RESUMEN

Rheumatoid arthritis (RA) is a most common chronic joint disease belonging to inflammatory autoimmune disease. The pathology of the disease is characterised by the infiltration and proliferation of fibroblast like synoviocytes (FLSs) and the destruction of the bone and cartilage matrix, which leads to joint dysfunction and even deformity.In recent years, an increasing number of studies have shown that MSCs have immunosuppressive properties and have been demonstrated in a variety of disease. Exosomes serve as carriers that mediate intercellular material transfer and information exchange and contain a variety of biologically active components such as proteins, lipids, and nucleic acids. Mesenchymal stem cell-derived exosomes (MSCs-Exos) play a regulatory role by carrying bioactive substances from the parental cells. Exos-derived from MSCs of different origins can modulate several pathological processes, such as immune inflammatory response, improvement of bone metabolism. In this research, we reviewed the current major pathogenesis of RA and explored the important role of MSCs-Exos in this disease. To be more precise, we summarised the effects of different MSCs-Exos on the pathomechanisms of RA, with a view to providing guidance and reference for future studies.

8.
Phys Chem Chem Phys ; 25(18): 13136-13144, 2023 May 10.
Artículo en Inglés | MEDLINE | ID: mdl-37129089

RESUMEN

Toluene is one of the simplest mono-substituted benzene derivatives and an important precursor to form polycyclic aromatic hydrocarbons (PAHs) and soot. However, there is a lack of critical understanding of the formation mechanisms of the toluene molecule. In this work, we explore high-temperature reactions of propargyl radical addition to 1,3-butadiene in a tubular flow microreactor. We obtain experimental evidence for the distinct formations of three C7H8 isomers consisting of toluene, 1,3,5-cycloheptatriene, and 5-methylene-1,3-cyclohexadiene discriminated by synchrotron VUV photoionization efficiency curves. Toluene is identified as the dominant product, which shows strong contrast with the calculated results of the system. By performing theoretical calculations and kinetic simulations, we found that 5-methylene-1,3-cyclohexadiene is a key product of the primary reaction, and toluene formation is enhanced by unavoidable secondary reactions, such as unimolecular isomerization and/or H-assisted isomerization reactions in the SiC microreactor. The current work provides competitive pathways for the enhanced formation of toluene, and may further help disentangle the toluene-promoted molecular growth mechanism of PAHs in combustion environments.

9.
J Phys Chem A ; 127(9): 2113-2122, 2023 Mar 09.
Artículo en Inglés | MEDLINE | ID: mdl-36815799

RESUMEN

Neopentane is an ideal fuel model to study low-temperature oxidation chemistry. The significant discrepancies between experimental data and simulations using the existing neopentane models indicate that an updated study of neopentane oxidation is needed. In this work, neopentane oxidation experiments are carried out using two jet-stirred reactors (JSRs) at 1 atm, at a residence time of 3 s, and at three different equivalence ratios of 0.5, 0.9, and 1.62. Two different analytical methods (synchrotron vacuum ultraviolet photoionization mass spectrometry and gas chromatography) were used to investigate the species distributions. Numerous oxidation intermediates were detected and quantified, including acetone, 3,3-dimethyloxetane, methacrolein, isobutene, 2-methylpropanal, isobutyric acid, and peroxides, which are valuable for validating the kinetic model describing neopentane oxidation. In the model development, the pressure dependencies of the rate constants for the reaction classes Q̇OOH + O2 and Q̇OOH decompositions are considered. This addition improves the prediction of the low-temperature oxidation reactivity of neopentane. Another focus of model development is to improve the prediction of carboxylic acids formed during the low-temperature oxidation of neopentane. The detection and identification of isobutyric acid indicates the existence of the Korcek mechanism during neopentane oxidation. Regarding the formation of acetic acid, the reaction channels are considered to be initiated from the reactions of ȮH radical addition to acetaldehyde/acetone. This updated kinetic model is validated extensively against the experimental data in this work and various experimental data available in the literature, including ignition delay times (IDTs) from both shock tubes (STs) and rapid compression machines (RCMs) and JSR speciation data at high temperatures.

10.
J Am Chem Soc ; 144(37): 16984-16995, 2022 09 21.
Artículo en Inglés | MEDLINE | ID: mdl-36069709

RESUMEN

Ketohydroperoxides (KHPs) are oxygenates with carbonyl and hydroperoxy functional groups, and they are generated under combustion and atmospheric conditions. Their fate is crucial for secondary organic aerosol formation in the troposphere and for the ignition processes of biofuels in advanced combustion engines. We investigated the thermodynamics and kinetics of nine hydrogen abstraction reactions from four ether KHPs by OH. We find that the rate constants are strongly affected by entropic effects whose estimation requires a consideration of higher-energy conformers of the transition state. A density functional was selected for these reactions by comparison to coupled cluster calculations, and it was used for calculations by multistructural canonical transition-state theory with multidimensional tunneling over the temperature range of 200-2000 K. We find that the effect of multistructural torsional anharmonicity is very large and quite different for the various ether KHP reactions. A leading cause of the structural dependence is the dominance of entropic factors due to the lack of hydrogen bonding in some of the higher-energy conformers of the transition states. Four of the reactions involve abstraction from the α-carbon (the carbon vicinal to the hydroperoxide group); they exhibit nonmonotonic temperature dependence with complex fuel-specific dependence. The rate constants for abstraction from a non-α-carbon of a given KHP can be faster than the ones for abstraction from an α-carbon; in two cases, this is due to entropy, and in one case, the non-α-carbon abstraction has a lower energy barrier. Tunneling and recrossing effects are also found to be important.


Asunto(s)
Biocombustibles , Peróxido de Hidrógeno , Carbono/química , Éteres , Hidrógeno/química , Enlace de Hidrógeno
11.
Rapid Commun Mass Spectrom ; 36(23): e9412, 2022 Dec 15.
Artículo en Inglés | MEDLINE | ID: mdl-36195998

RESUMEN

RATIONALE: Biomass is a potential feedstock for making liquid fuels and valuable chemicals. Quantitative analysis of biomass conversion in real time by photoionization mass spectrometry (PIMS) is an important way to understand the reaction process. However, the lack of photoionization data for biomass-derived compounds limits the research using PIMS. METHODS: Measurements of photoionization data were performed with synchrotron vacuum ultraviolet PIMS. Toluene and methanol were used as calibrated references and solvents in this experiment since their photoionization cross-sections (PICS) are well documented in the literature. RESULTS: The ionization energies (IEs) of 23 biomass-derived compounds were measured. Among them, the PICSs of 14 compounds were calibrated and presented. Besides, the IEs of 95 other biomass-derived compounds and their typical fragment ions were also summarized. CONCLUSIONS: A photoionization database related to IEs and PICSs of biomass-derived compounds (m/z < 200) is established. PICSs of most biomass-derived compounds have low values at the most frequently used photoionization energy of 10.5 eV. Lignin-derived compounds have lower IEs than carbohydrate-derived compounds.


Asunto(s)
Rayos Ultravioleta , Biomasa , Vacio , Espectrometría de Masas/métodos , Iones/química
12.
Phys Chem Chem Phys ; 24(36): 21567-21577, 2022 Sep 21.
Artículo en Inglés | MEDLINE | ID: mdl-36082833

RESUMEN

Soft photoionization molecular-beam mass spectrometry (PI-MBMS) using synchrotron vacuum ultraviolet (SVUV) light has been significantly developed and applied in various fields in recent decades. Particularly, the tunability of SVUV light enables two-dimensional measurements, i.e. mass spectrum and photoionization efficiency spectrum measurements, affording isomer distinguishment in complex reaction processes. Many key intermediates have been successfully detected in combustion and catalysis reactions with the help of the state-of-the-art SVUV-PI-MBMS, promoting the understanding of the chemical mechanisms. Herein, we present a brief review of the instrumentation of beamline and PI-MBMS machines at the current synchrotron user facility Hefei Light Source II and exemplify the advantages of the SVUV-PI-MBMS method with recent applications in combustion and catalysis research, especially in probing key reaction intermediates. Future opportunities with the next generation synchrotron light source and bench-top light source have also been discussed.

13.
Phys Chem Chem Phys ; 24(43): 26915-26925, 2022 Nov 09.
Artículo en Inglés | MEDLINE | ID: mdl-36317708

RESUMEN

Understanding the combustion chemistry of biofuel compounds is of great importance in the intelligent selection of next-generation alternative fuels. Ethylene glycol (C6H10O2) is a prototypical representative of potential biofuels. In this work, the thermal decompositions along with the dissociative ionization of ethylene glycol are studied by synchrotron VUV photoionization mass spectrometry. As a part of the dissociative ionization study, the appearance energies of seven fragments are measured. Using the theoretical calculation results, the possible formation channels of these fragments are proposed. In particular, the productions of CH3OH+ and CH3OH2+ are suggested to be from the isomerization/dissociation process, where double proton transfer processes are highlighted. Using a tunable VUV source, the high-temperature pyrolysis products of ethylene glycol are differentiated from the dissociative ionization products. Specifically, two isomeric products vinyl alcohol and acetaldehyde by H2O elimination are obtained. Formaldehyde and methanol from direct C-C bond cleavage are identified. The fragmentations of fragile radicals such as hydroxymethyl, methoxy and ethoxy are used to explain the missing products from the direct C-C and C-O bond dissociation reactions. There is no experimental evidence for the occurrence of the H and H2 elimination reactions which may have not been accessed under the present temperature conditions.


Asunto(s)
Glicol de Etileno , Sincrotrones , Rayos Ultravioleta , Espectrometría de Masas/métodos , Biocombustibles
14.
J Phys Chem A ; 126(43): 8021-8027, 2022 Nov 03.
Artículo en Inglés | MEDLINE | ID: mdl-36259764

RESUMEN

Calculations and experiments were conducted on ozonolysis of ethyl vinyl ether (EVE) and butyl vinyl ether to identify an unconventional diradical intermediate generated from the O-O bond cleavage of primary ozonide. The diradical can undergo a H atom shifting process that yields keto-hydroperoxide (KHP), the characteristic product that identifies the existence of a diradical intermediate. RRKM-ME calculation, based on the PES at the CCSD(T)/VTZ//M06-2X/6-311++G(2df,2p) level, disclosed branching ratios of ∼0.65% for KHP formation. Using synchrotron-generated vacuum-ultraviolet photoionization mass spectrometry measurements, the formation of KHPs (C4H8O4) in ozonolysis of EVE was confirmed by ion signals of C4H8O4+ (ionization of KHP) and C4H7O2+ (ion fragment from the loss of HO2 from KHP) by comparing their photoionization efficiency spectra with the calculated adiabatic ionization energies and appearance energies.

15.
J Phys Chem A ; 126(28): 4630-4635, 2022 Jul 21.
Artículo en Inglés | MEDLINE | ID: mdl-35793234

RESUMEN

Resonance-stabilized radicals (RSRs), such as the indenyl radical (C9H7), are proposed to be initiator radicals in soot inception and growth in hydrocarbon combustion processes, but spectroscopic data for many RSRs are still lacking. In this work, the gas-phase optical absorption spectra of the B̃2A2-X̃2A2 electronic transition of indenyl were identified in a supersonic indene/argon plasma jet. Spectroscopic parameters, including the transition energy, rotational constants, and upper-state lifetime broadening, were obtained from analysis of the experimental spectra. The results were readily applied to the quantitative detection of indenyl produced from high-temperature reactions in a jet-stirred reactor. This study now makes indenyl optically accessible in further reaction kinetics studies and in situ spectroscopic diagnostics of hydrocarbon combustion processes.

16.
Angew Chem Int Ed Engl ; 61(42): e202209168, 2022 Oct 17.
Artículo en Inglés | MEDLINE | ID: mdl-35895936

RESUMEN

A crucial chain-branching step in autoignition is the decomposition of ketohydroperoxides (KHP) to form an oxy radical and OH. Other pathways compete with chain-branching, such as "Korcek" dissociation of γ-KHP to a carbonyl and an acid. Here we characterize the formation of a γ-KHP and its decomposition to formic acid+acetone products from observations of n-butane oxidation in two complementary experiments. In jet-stirred reactor measurements, KHP is observed above 590 K. The KHP concentration decreases with increasing temperature, whereas formic acid and acetone products increase. Observation of characteristic isotopologs acetone-d3 and formic acid-d0 in the oxidation of CH3 CD2 CD2 CH3 is consistent with a Korcek mechanism. In laser-initiated oxidation experiments of n-butane, formic acid and acetone are produced on the timescale of KHP removal. Modelling the time-resolved production of formic acid provides an estimated upper limit of 2 s-1 for the rate coefficient of KHP decomposition to formic acid+acetone.

17.
Phys Chem Chem Phys ; 23(17): 10456-10467, 2021 May 05.
Artículo en Inglés | MEDLINE | ID: mdl-33890587

RESUMEN

2-Methyl-3-buten-2-ol (MBO232) is a biogenic volatile organic compound (BVOC), and has a large percentage of emission into the atmosphere. The vacuum ultraviolet (VUV) photochemistry of BVOCs is of great importance for atmospheric chemistry. Studies have been carried out on several BVOCs but have not extended to MBO232. In the present report, the photoionization and dissociation processes of MBO232 in the energy range of 8.0-15.0 eV have been studied by tunable VUV synchrotron radiation coupled with a time-of-flight mass spectrometer. By measuring the photoionization spectra, the adiabatic ionization energy (AIE) of MBO232 and the appearance energies (AEs) of the eight identified fragment ions (i.e., C4H7O+, C3H7O+, C5H9+, C3H6O+, CH3CO+, CH3O+, C4H5+, and C3H5+) were determined. High-level quantum chemistry calculations suggest that there are 3 direct channels and 5 indirect channels via transition states and intermediates accountable for these fragments. Among the reaction channels, the direct elimination of CH3 is the most dominant channel and produces the resonance-stabilized radical cation. Most interestingly, our results show that the CH3 selectively migrates towards the cation, which leads to the different indirect channels. The CH3 migration is a rare process in the dissociative photoionization of metal-free organic molecules. We explain the process by molecular orbital calculations and electron localization function analysis and explore the non-conventional dissociation channels via the CH3 roaming mechanism. We further perform kinetics analysis using RRKM theory for the channels of interest. The activation barrier, and rate constants are analyzed for the branching fractions of the products. These results provide important implications for the VUV photochemistry of BVOCs in the atmosphere.

18.
J Phys Chem A ; 125(48): 10451-10462, 2021 Dec 09.
Artículo en Inglés | MEDLINE | ID: mdl-34813343

RESUMEN

2-Methyl-3-buten-2-ol (MBO232) is a potential biofuel and renewable fuel additive. In a combustion environment, the consumption of MBO232 is mainly through the reaction with a OH radical, one of the most important oxidants. Here, we predict the intricate reactions of MBO232 and OH radicals under a broad range of combustion conditions, that is, 230-2500 K and 0.01-1000 atm. The potential energy surfaces of H-abstraction and OH-addition have been investigated at the CCSD(T)/CBS//M06-2X/def2-TZVP level, and the rate constants were calculated via Rice-Ramsperger-Kassel-Marcus/master equation (RRKM/ME) theory. The decomposition reactions of the critical intermediates from the OH-addition reactions have also been studied. Our results show that OH-addition reactions are dominant below 850 K, while H-abstraction reactions, especially the channel-abstracting H atoms from the methyl groups, are more competitive at higher temperatures. We found that it is necessary to discriminate H atoms attached to the same C atom, as their abstraction rates can differ by up to 1 order of magnitude. The calculated results show good agreement with the reported experimental data. We have provided the modified Arrhenius expressions for rate constants of the dominant channels. The kinetic data determined in this work are of much value for constructing the combustion models of MBO232 and understanding the combustion kinetics and mechanism of other unsaturated alcohols.

19.
Int J Legal Med ; 134(2): 399-409, 2020 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-31811377

RESUMEN

With growing cancer morbidity, forensics cases in which archived tumour tissues can be used as biological samples are increasing, and an effective method to identify the body source of tumour tissues is needed. Single nucleotide polymorphisms (SNPs) may be a promising biomarker to identify the source of tumour tissues because of their low mutation rate and small amplicon size. Next-generation sequencing techniques offers the ability to detect hundreds of SNPs in a single run. The Precision ID Identity Panel (Thermo Fisher Scientific, Waltham, MA, USA) detects 90 autosomal SNPs for individual identification and 34 lineage-informative SNPs on Y chromosome using the Ion PGM system (Thermo Fisher Scientific). In this study, we evaluated performance of the panel for individual identification of tumour tissues. One hundred and fifty pairs of tumour tissues and corresponding normal tissues were analysed. Loss of heterozygosity was detected only in tumour tissues. The identity-by-state (IBS) scoring system was adopted to identify the body source of tumour tissues. The IBS score, as well as the number of loci with 2 alleles (A2), 1 allele (A1) and 0 alleles (A0) shared, were analysed within each tumour-normal pair, unrelated individual pairs, parent-offspring pairs and full-sibling pairs. According to the probability distribution, threshold of A2 in the range of 69 to 89 could achieve accuracy > 99% in identifying the source of tumour tissues. Thus, we developed a new strategy (process and criteria) to identify the source of tumour tissues that could be used in practice.


Asunto(s)
ADN de Neoplasias/genética , Secuenciación de Nucleótidos de Alto Rendimiento/métodos , Polimorfismo de Nucleótido Simple , Análisis de Secuencia de ADN/métodos , Alelos , Sitios Genéticos , Genotipo , Heterocigoto , Humanos , Probabilidad , Sensibilidad y Especificidad
20.
Phys Chem Chem Phys ; 22(3): 1222-1241, 2020 Jan 21.
Artículo en Inglés | MEDLINE | ID: mdl-31850421

RESUMEN

Through the use of tunable vacuum ultraviolet light generated by the DESIRS VUV synchrotron beamline, a jet-stirred reactor was coupled for the first time to an advanced photoionization mass spectrometer based upon a double imaging PhotoElectron PhotoIon COincidence (i2PEPICO) scheme. This new coupling was used to investigate the low-temperature oxidation of n-pentane, a prototype molecule for gasoline or diesel fuels. Experiments were performed under quasi-atmospheric pressure (1.1 bar) with a residence time of 3 s for two equivalence ratios (1/3 and 0.5) with a fuel initial mole fraction of 0.01. The measured time-of-flight mass spectra are in good agreement with those previously obtained with other photoionization mass spectrometers and, like those previous ones, display several m/z peaks for which the related species assignation is ambiguous. This paper shows how the analysis of the coincident mass-tagged Threshold PhotoElectron Spectra (TPES) together with first principle computations, consisting of the determination of the adiabatic ionization energies and the spectra of some products, may assist products' identification. The results mostly confirm those previously obtained by photoionization mass spectrometry and gas chromatography, but also allow a more accurate estimation of the 1-pentene/2-pentene mole fraction ratio. Our data also indicate a higher formation of acetone and methyl ethyl ketone than what is predicted by current models, as well as the presence of products that were not previously taken into account, such as methoxyacetylene, methyl vinyl ketone or furanone. The formation of three, four and five membered ring cyclic ethers is confirmed along with linear ketones: 2- and 3-pentanone. A significant general trend in indicating higher amounts of ketones than are indicated by gas chromatography is noted. Finally, TPES of alkenylhydroperoxides are also provided for the first time and constrains on the isomers identification are provided.

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