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1.
Langmuir ; 36(35): 10429-10437, 2020 09 08.
Artículo en Inglés | MEDLINE | ID: mdl-32787070

RESUMEN

In this report, we present a method to characterize the kinetics of electron transfer across the bilayer of a unilamellar liposome composed of 1,2-dimyristoyl-sn-glycero-3-phosphocholine. The method utilizes synthetic phospholipids containing noninvasive nitroxide spin labels having the >N-O• moiety at well-defined distances from the outer surface of the liposome to serve as reporters for their local environment and, at the same time, permit measurement of the kinetics of electron transfer. We used 5-doxyl and 16-doxyl stearic acids. The paramagnetic >N-O• moiety is photo-oxidized to the corresponding diamagnetic oxoammonium cation by a ruthenium electron acceptor formed in the solution. Electron transfer is monitored by three independent spectroscopic methods: by both steady-state and time-resolved electron paramagnetic resonance and by optical spectroscopy. These techniques allowed us to differentiate between the electron transfer rates of nitroxides located in the outer leaflet of the phospholipid bilayer and of those located in the inner leaflet. Measurement of electron transfer rates as a function of temperature revealed a low-activation barrier (ΔG‡ ∼ 40 kJ/mol) that supports a tunneling mechanism.

2.
Biochemistry ; 54(20): 3164-72, 2015 May 26.
Artículo en Inglés | MEDLINE | ID: mdl-25910021

RESUMEN

A member of the retinal protein family, halorhodopsin, acts as an inward light-driven Cl(-) pump. It was recently demonstrated that the Natronomonas pharaonis halorhodopsin-overproducing mutant strain KM-1 contains, in addition to the retinal chromophore, a lipid soluble chromophore, bacterioruberin, which binds to crevices between adjacent protein subunits. It is established that halorhodopsin has several chloride binding sites, with binding site I, located in the retinal protonated Schiff base vicinity, affecting retinal absorption. However, it remained unclear whether cations also bind to this protein. Our electron paramagnetic resonance spectroscopy examination of cation binding to the halorhodopsin mutant KM-1 reveals that divalent cations like Mn(2+) and Ca(2+) bind to the protein. Halorhodopsin has a high affinity for Mn(2+) ions, which bind initially to several strong binding sites and then to binding sites that exhibit positive cooperativity. The binding behavior is pH-dependent, and its strength is influenced by the nature of counterions. Furthermore, the binding strength of Mn(2+) ions decreases upon removal of the retinal chromophore from the protein or following bacterioruberin oxidation. Our results also indicate that Mn(2+) ions, as well as Cl(-) ions, first occupy binding sites other than site I. The observed synergetic effect between cation and anion binding suggests that while Cl(-) anions bind to halorhodopsin at low concentrations, the occupancy of site I requires a high concentration.


Asunto(s)
Halorrodopsinas/química , Manganeso/química , Unión Competitiva , Cationes , Cloruros/química , Concentración de Iones de Hidrógeno , Modelos Moleculares , Natronobacterium/química , Unión Proteica
3.
J Am Chem Soc ; 137(14): 4634-7, 2015 Apr 15.
Artículo en Inglés | MEDLINE | ID: mdl-25827819

RESUMEN

A unique mode of molecular oxygen activation, involving metal-ligand cooperation, is described. Ir pincer complexes [((t)BuPNP)Ir(R)] (R = C6H5 (1), CH2COCH3 (2)) react with O2 to form the dearomatized hydroxo complexes [((t)BuPNP*)Ir(R)(OH)] ((t)BuPNP* = deprotonated (t)BuPNP ligand), in a process which utilizes both O-atoms. Experimental evidence, including NMR, EPR, and mass analyses, indicates a binuclear mechanism involving an O-atom transfer by a peroxo intermediate.

4.
Plant Physiol ; 165(1): 249-61, 2014 May.
Artículo en Inglés | MEDLINE | ID: mdl-24599491

RESUMEN

The production of singlet oxygen is typically associated with inefficient dissipation of photosynthetic energy or can arise from light reactions as a result of accumulation of chlorophyll precursors as observed in fluorescent (flu)-like mutants. Such photodynamic production of singlet oxygen is thought to be involved in stress signaling and programmed cell death. Here we show that transcriptomes of multiple stresses, whether from light or dark treatments, were correlated with the transcriptome of the flu mutant. A core gene set of 118 genes, common to singlet oxygen, biotic and abiotic stresses was defined and confirmed to be activated photodynamically by the photosensitizer Rose Bengal. In addition, induction of the core gene set by abiotic and biotic selected stresses was shown to occur in the dark and in nonphotosynthetic tissue. Furthermore, when subjected to various biotic and abiotic stresses in the dark, the singlet oxygen-specific probe Singlet Oxygen Sensor Green detected rapid production of singlet oxygen in the Arabidopsis (Arabidopsis thaliana) root. Subcellular localization of Singlet Oxygen Sensor Green fluorescence showed its accumulation in mitochondria, peroxisomes, and the nucleus, suggesting several compartments as the possible origins or targets for singlet oxygen. Collectively, the results show that singlet oxygen can be produced by multiple stress pathways and can emanate from compartments other than the chloroplast in a light-independent manner. The results imply that the role of singlet oxygen in plant stress regulation and response is more ubiquitous than previously thought.


Asunto(s)
Arabidopsis/fisiología , Arabidopsis/efectos de la radiación , Cloroplastos/metabolismo , Cloroplastos/efectos de la radiación , Luz , Oxígeno Singlete/metabolismo , Estrés Fisiológico/efectos de la radiación , Arabidopsis/efectos de los fármacos , Arabidopsis/genética , Cloroplastos/efectos de los fármacos , Oscuridad , Espectroscopía de Resonancia por Spin del Electrón , Flagelina/farmacología , Fluorescencia , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Regulación de la Expresión Génica de las Plantas/efectos de la radiación , Genes de Plantas , Datos de Secuencia Molecular , Mutación/genética , Fotosíntesis/efectos de los fármacos , Fotosíntesis/genética , Fotosíntesis/efectos de la radiación , ARN Mensajero/genética , ARN Mensajero/metabolismo , Rotenona/farmacología , Estrés Fisiológico/efectos de los fármacos , Estrés Fisiológico/genética , Transcriptoma/genética
5.
Inorg Chem ; 53(3): 1779-87, 2014 Feb 03.
Artículo en Inglés | MEDLINE | ID: mdl-24437566

RESUMEN

High-valent oxo compounds of transition metals are often implicated as active species in oxygenation of hydrocarbons through carbon-hydrogen bond activation or oxygen transfer and also in water oxidation. Recently, several examples of cobalt-catalyzed water oxidation have been reported, and cobalt(IV) species have been suggested as active intermediates. A reactive species, formally a dicobalt(IV)-µ-oxo polyoxometalate compound [(α2-P2W17O61Co)2O](14-), [(POMCo)2O], has now been isolated and characterized by the oxidation of a monomeric [α2-P2W17O61Co(II)(H2O)](8-), [POMCo(II)H2O], with ozone in water. The crystal structure shows a nearly linear Co-O-Co moiety with a Co-O bond length of ∼1.77 Å. In aqueous solution [(POMCo)2O] was identified by (31)P NMR, Raman, and UV-vis spectroscopy. Reactivity studies showed that [(POMCo)2O]2O] is an active compound for the oxidation of H2O to O2, direct oxygen transfer to water-soluble sulfoxides and phosphines, indirect epoxidation of alkenes via a Mn porphyrin, and the selective oxidation of alcohols by carbon-hydrogen bond activation. The latter appears to occur via a hydrogen atom transfer mechanism. Density functional and CASSCF calculations strongly indicate that the electronic structure of [(POMCo)2O]2O] is best defined as a compound having two cobalt(III) atoms with two oxidized oxygen atoms.


Asunto(s)
Cobalto/química , Oxígeno/química , Compuestos de Tungsteno/química , Agua/química , Cristalografía por Rayos X , Enlace de Hidrógeno , Modelos Moleculares , Oxidación-Reducción , Ozono/química , Análisis Espectral
6.
Biochem J ; 448(1): 83-91, 2012 Nov 15.
Artículo en Inglés | MEDLINE | ID: mdl-22888904

RESUMEN

The principal role of AChE (acetylcholinesterase) is termination of impulse transmission at cholinergic synapses by rapid hydrolysis of the neurotransmitter acetylcholine. The active site of AChE is near the bottom of a long and narrow gorge lined with aromatic residues. It contains a CAS (catalytic 'anionic' subsite) and a second PAS (peripheral 'anionic' site), the gorge mouth, both of which bind acetylcholine via π-cation interactions, primarily with two conserved tryptophan residues. It was shown previously that generation of (1)O(2) by illumination of MB (Methylene Blue) causes irreversible inactivation of TcAChE (Torpedo californica AChE), and suggested that photo-oxidation of tryptophan residues might be responsible. In the present study, structural modification of the TcAChE tryptophan residues induced by MB-sensitized oxidation was investigated using anti-N-formylkynurenine antibodies and MS. From these analyses, we determined that N-formylkynurenine derivatives were specifically produced from Trp(84) and Trp(279), present at the CAS and PAS respectively. Peptides containing these two oxidized tryptophan residues were not detected when the competitive inhibitors, edrophonium and propidium (which should displace MB from the gorge) were present during illumination, in agreement with their efficient protection against the MB-induced photo-inactivation. Thus the bound MB elicited selective action of (1)O(2) on the tryptophan residues facing on to the water-filled active-site gorge. The findings of the present study thus demonstrate the localized action and high specificity of MB-sensitized photo-oxidation of TcAChE, as well as the value of this enzyme as a model system for studying the mechanism of action and specificity of photosensitizing agents.


Asunto(s)
Acetilcolinesterasa/química , Inhibidores de la Colinesterasa/farmacología , Azul de Metileno/metabolismo , Fármacos Fotosensibilizantes/metabolismo , Oxígeno Singlete/farmacología , Torpedo/metabolismo , Acetilcolinesterasa/efectos de los fármacos , Animales , Unión Competitiva , Dominio Catalítico , Inhibidores de la Colinesterasa/química , Edrofonio/metabolismo , Edrofonio/farmacología , Órgano Eléctrico/enzimología , Hidrólisis , Quinurenina/análogos & derivados , Quinurenina/química , Espectrometría de Masas , Azul de Metileno/química , Azul de Metileno/efectos de la radiación , Modelos Moleculares , Oxidación-Reducción , Fotoquímica , Fármacos Fotosensibilizantes/química , Fármacos Fotosensibilizantes/efectos de la radiación , Propidio/metabolismo , Propidio/farmacología , Conformación Proteica , Relación Estructura-Actividad , Especificidad por Sustrato , Triptófano/química , Agua
7.
Biochim Biophys Acta ; 1797(3): 406-13, 2010 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-20035711

RESUMEN

Using a 'metal-first' approach, we computationally designed, prepared, and characterized a four-iron four-sulfur (Fe(4)S(4)) cluster protein with a non-natural alpha-helical coiled-coil fold. The novelty of this fold lies in the placement of a Fe(4)S(4) cluster within the hydrophobic core of a four-helix bundle, making it unique among previous iron-sulfur (FeS) protein designs, and different from known natural FeS proteins. The apoprotein, recombinantly expressed and purified from E. coli, readily self-assembles with Fe(4)S(4) clusters in vitro. UV-Vis absorption and CD spectroscopy, elemental analysis, gel filtration, and analytical ultracentrifugation confirm that the protein is folded and assembled as designed, namely, alpha-helical coiled-coil binding a single Fe(4)S(4) cluster. Dithionite-reduced holoprotein samples have characteristic rhombic EPR spectra, typical of low-potential, [Fe(4)S(4)](+) (S=1/2), with g values of g(zy)=(1.970, 1.975), and g(x)=2.053. The temperature, and power dependence of the signal intensity were also characteristic of [Fe(4)S(4)](+) clusters with very efficient spin relaxation, but almost without any interaction between adjacent clusters. The new design is very promising although optimization is required, particularly for preventing aggregation, and adding second shell interactions to stabilize the reduced state. Its main advantage is its extendibility into a multi-FeS cluster protein by simply duplicating and translating the binding site along the coiled-coil axis. This opens new possibilities for designing protein-embedded redox chains that may be used as "wires" for coupling any given set of redox enzymes.


Asunto(s)
Proteínas Hierro-Azufre/química , Proteínas Hierro-Azufre/metabolismo , Hierro/metabolismo , Pliegue de Proteína , Azufre/metabolismo , Secuencia de Aminoácidos , Sitios de Unión , Cromatografía en Gel , Dicroismo Circular , Biología Computacional , Espectroscopía de Resonancia por Spin del Electrón , Humanos , Hierro/química , Proteínas Hierro-Azufre/genética , Datos de Secuencia Molecular , Mutagénesis Sitio-Dirigida , Oxidación-Reducción , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción , Espectrofotometría Ultravioleta , Azufre/química , Ultracentrifugación
8.
J Am Chem Soc ; 133(2): 188-90, 2011 Jan 19.
Artículo en Inglés | MEDLINE | ID: mdl-21158388

RESUMEN

A phenanthroline ligand decorated at the 5,6-position with a 15-crown-5 ether was used to prepare a metalorganic-polyoxometalate hybrid complex Re(I)(L)(CO)(3)CH(3)CN-MHPW(12)O(40) (L = 15-crown-5-phenanthroline, M = Na(+), H(3)O(+)). X-ray diffraction, (1)H and (13)C NMR, ESI-MS, IR, and elemental analysis were used to characterize this complex. In the presence of Pt/C, the polyoxometalate moiety in Re(I)(L)(CO)(3)CH(3)CN-MHPW(12)O(40) can oxidize H(2) to two protons and two electrons which in the presence of visible light can catalyze the photoreduction of CO(2) to CO with H(2) as the reducing agent instead of the universally used amines as sacrificial reducing agents. An EPR spectrum of a stable intermediate species under reaction conditions shows characteristics of a PW(V)W(VI)(11)O(40) and a Re(0) species with a tentative assignment of the intermediate as Re(0)(L)(CO)(3)(S)-MH(3)PW(V)W(VI)(11)O(40).


Asunto(s)
Dióxido de Carbono/química , Monóxido de Carbono/síntesis química , Hidrógeno/química , Compuestos Organometálicos/química , Renio/química , Monóxido de Carbono/química , Modelos Moleculares , Estructura Molecular , Compuestos Organometálicos/síntesis química , Fenantrolinas/química , Procesos Fotoquímicos , Compuestos de Tungsteno/química
9.
Protein Sci ; 30(5): 966-981, 2021 05.
Artículo en Inglés | MEDLINE | ID: mdl-33686648

RESUMEN

Stabilization of Torpedo californica acetylcholinesterase by the divalent cations Ca+2 , Mg+2 , and Mn+2 was investigated. All three substantially protect the enzyme from thermal inactivation. Electron paramagnetic resonance revealed one high-affinity binding site for Mn+2 and several much weaker sites. Differential scanning calorimetry showed a single irreversible thermal transition. All three cations raise both the temperature of the transition and the activation energy, with the transition becoming more cooperative. The crystal structures of the Ca+2 and Mg+2 complexes with Torpedo acetylcholinesterase were solved. A principal binding site was identified. In both cases, it consists of four aspartates (a 4D motif), within which the divalent ion is embedded, together with several water molecules. It makes direct contact with two of the aspartates, and indirect contact, via waters, with the other two. The 4D motif has been identified in 31 acetylcholinesterase sequences and 28 butyrylcholinesterase sequences. Zebrafish acetylcholinesterase also contains the 4D motif; it, too, is stabilized by divalent metal ions. The ASSAM server retrieved 200 other proteins that display the 4D motif, in many of which it is occupied by a divalent cation. It is a very versatile motif, since, even though tightly conserved in terms of RMSD values, it can contain from one to as many as three divalent metal ions, together with a variable number of waters. This novel motif, which binds primarily divalent metal ions, is shared by a broad repertoire of proteins. An animated Interactive 3D Complement (I3DC) is available in Proteopedia at http://proteopedia.org/w/Journal:Protein_Science:3.


Asunto(s)
Acetilcolinesterasa/química , Proteínas de Peces/química , Torpedo , Animales , Sitios de Unión , Cationes Bivalentes/química , Cristalografía por Rayos X , Estabilidad de Enzimas , Metales/química
10.
Chemistry ; 16(4): 1356-64, 2010 Jan 25.
Artículo en Inglés | MEDLINE | ID: mdl-20013770

RESUMEN

A polyoxometalate of the Keggin structure substituted with Ru(III), (6)Q(5)[Ru(III)(H(2)O)SiW(11)O(39)] in which (6)Q=(C(6)H(13))(4)N(+), catalyzed the photoreduction of CO(2) to CO with tertiary amines, preferentially Et(3)N, as reducing agents. A study of the coordination of CO(2) to (6)Q(5)[Ru(III)(H(2)O)SiW(11)O(39)] showed that 1) upon addition of CO(2) the UV/Vis spectrum changed, 2) a rhombic signal was obtained in the EPR spectrum (g(x)=2.146, g(y)=2.100, and g(z)=1.935), and 3) the (13)C NMR spectrum had a broadened peak of bound CO(2) at 105.78 ppm (Delta(1/2)=122 Hz). It was concluded that CO(2) coordinates to the Ru(III) active site in both the presence and absence of Et(3)N to yield (6)Q(5)[Ru(III)(CO(2))SiW(11)O(39)]. Electrochemical measurements showed the reduction of Ru(III) to Ru(II) in (6)Q(5)[Ru(III)(CO(2))SiW(11)O(39)] at -0.31 V versus SCE, but no such reduction was observed for (6)Q(5)[Ru(III)(H(2)O)SiW(11)O(39)]. DFT-calculated geometries optimized at the M06/PC1//PBE/AUG-PC1//PBE/PC1-DF level of theory showed that CO(2) is preferably coordinated in a side-on manner to Ru(III) in the polyoxometalate through formation of a Ru-O bond, further stabilized by the interaction of the electrophilic carbon atom of CO(2) to an oxygen atom of the polyoxometalate. The end-on CO(2) bonding to Ru(III) is energetically less favorable but CO(2) is considerably bent, thus favoring nucleophilic attack at the carbon atom and thereby stabilizing the carbon sp(2) hybridization state. Formation of a O(2)C-NMe(3) zwitterion, in turn, causes bending of CO(2) and enhances the carbon sp(2) hybridization. The synergetic effect of these two interactions stabilizes both Ru-O and C-N interactions and probably determines the promotional effect of an amine on the activation of CO(2) by [Ru(III)(H(2)O)SiW(11)O(39)](5-). Electronic structure analysis showed that the polyoxometalate takes part in the activation of both CO(2) and Et(3)N. A mechanistic pathway for photoreduction of CO(2) is suggested based on the experimental and computed results.

11.
Chemosphere ; 258: 127266, 2020 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-32535443

RESUMEN

Copper oxide nanoparticles (CuO-NPs) have been suggested as effective catalysts to degrade many persistent organic contaminants. In parallel, CuO-NPs are considered toxic to soil microorganisms, plants and human cells, possibly because they induce oxidative stress and generation of reactive oxygen species (ROS). However, the mechanism of the catalytic process and the generated ROS are poorly understood. Here we discuss the reaction mechanism of CuO-NPs during the catalytic degradation of enrofloxacin - an antibiotic pharmaceutical used in this study as a representative persistent organic compound. The degradation of an aqueous solution of the enrofloxacin exposed to CuO-NPs and hydrogen peroxide was studied showing fast removal of the enrofloxacin at ambient conditionsns. ROS production was identified by electron spin resonance and a spin trapping technique. The distribution of the free radical species indicated production of a high percentage of superoxide (O2-.) radicals as well as hydroxyl radicals; this production is similar to the "radical production" activity of the superoxide dismutase (SOD) enzyme in the presence of hydrogen peroxide. This activity was also tested in the opposite direction, to examine if CuO-NPs show reactivity that potentially mimics the classical SOD enzymatic activity. The CuO-NPs were found to catalyze the dismutation of superoxide to hydrogen peroxide and oxygen in a set of laboratory experiments.


Asunto(s)
Cobre/química , Enrofloxacina/análisis , Nanopartículas/química , Especies Reactivas de Oxígeno/química , Contaminantes Químicos del Agua/análisis , Purificación del Agua/métodos , Catálisis , Enrofloxacina/química , Humanos , Peróxido de Hidrógeno/química , Modelos Teóricos , Oxidación-Reducción , Superóxido Dismutasa/química , Contaminantes Químicos del Agua/química
12.
Biochemistry ; 48(3): 563-74, 2009 Jan 27.
Artículo en Inglés | MEDLINE | ID: mdl-19115961

RESUMEN

The dimeric form of Torpedo californica acetylcholinesterase provides a valuable experimental system for studying transitions between native, partially unfolded, and unfolded states since long-lived partially unfolded states can be generated by chemical modification of a nonconserved buried cysteine residue, Cys 231, by denaturing agents, by oxidative stress, and by thermal inactivation. Elucidation of the 3D structures of complexes of Torpedo californica acetylcholinesterase with a repertoire of reversible inhibitors permits their classification into three categories: (a) active-site directed inhibitors, which interact with the catalytic anionic subsite, at the bottom of the active-site gorge, such as edrophonium and tacrine; (b) peripheral anionic site inhibitors, which interact with a site at the entrance to the gorge, such as propidium and d-tubocurarine; and (c) elongated gorge-spanning inhibitors, which bridge the two sites, such as BW284c51 and decamethonium. The effects of these three categories of reversible inhibitors on the stability of Torpedo californica acetylcholinesterase were investigated using spectroscopic techniques and differential scanning calorimetry. Thermodynamic parameters obtained calorimetrically permitted quantitative comparison of the effects of the inhibitors on the enzyme's thermal stability. Peripheral site inhibitors had a relatively small effect, while gorge-spanning ligands and those binding at the catalytic anionic site, had a much larger stabilizing effect. The strongest effect was, however, observed with the polypeptide toxin, fasciculin II (FasII), even though, in terms of its binding site, it belongs to the category of peripheral site ligands. The stabilizing effect of the ligands binding at the anionic subsite of the active site, like that of the gorge-spanning ligands, may be ascribed to their capacity to stabilize the interaction between the two subdomains of the enzyme. The effect of fasciculin II may be ascribed to the large surface area of interaction (>2000 A(2)) between the two proteins. Stabilization of Torpedo californica acetylcholinesterase by both divalent cations and chemical chaperones was earlier shown to be due to a shift in equilibrium between the native state and a partially unfolded state ( Millard et al. ( 2003 ) Protein Sci. 12 , 2337 - 2347 ). The low molecular weight inhibitors used in the present study may act similarly and can thus be considered as pharmacological chaperones for stabilizing the fully folded native form of the enzyme.


Asunto(s)
Acetilcolinesterasa/metabolismo , Inhibidores de la Colinesterasa/farmacología , Torpedo/metabolismo , Animales , Bencenamina, 4,4'-(3-oxo-1,5-pentanodiil)bis(N,N-dimetil-N-2-propenil-), Dibromuro/farmacología , Calorimetría , Compuestos de Decametonio/farmacología , Disulfuros/metabolismo , Venenos Elapídicos/farmacología , Entropía , Activación Enzimática/efectos de los fármacos , Estabilidad de Enzimas/efectos de los fármacos , Guanidina/farmacología , Humanos , Cinética , Ligandos , Espectroscopía de Resonancia Magnética , Desnaturalización Proteica/efectos de los fármacos , Pliegue de Proteína/efectos de los fármacos , Estructura Secundaria de Proteína , Marcadores de Spin , Tacrina/farmacología , Temperatura
13.
Biochim Biophys Acta ; 1784(11): 1570-7, 2008 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-18778797

RESUMEN

Fibrillization of amyloid polypeptides is accompanied by formation of reactive oxygen species (ROS), which, in turn, is assumed to further promote amyloid-related pathologies. Different polyphenols, all of which are established antioxidants, cause dissociation of amyloid fibrils. This study addresses the latter, poorly understood process. Specifically, we have investigated the dissociation of Abeta(42) fibrils by six different polyphenols, using electron microscopy and spectrofluorometric analysis. Simultanously, we have monitored the production of ROS using electron spin resonance (ESR) and the commercially available peroxide assay kit. Using the same methods we found that curcumin, one of the most potent destabilizing agents of Abeta(42), induced dissociation of fibrils of other amyloid polypeptides [Abeta(40), Abeta(42)Nle35, islet amyloid polypeptide and a fragment of alpha-synuclein]. When the solution contained traces of transition metal, all the dissociation reactions were accompanied by ROS formation, independent of the presence of a methionine residue. Kinetic studies show that the formation of ROS lags behind dissociation, indicating that if casual relationship exists between these two processes, then ROS formation may be considered a consequence and not a cause of dissociation. These findings open new avenues in amyloid research that will be required to gain further understanding of our results and of their implications.


Asunto(s)
Amiloide/efectos de los fármacos , Flavonoides/farmacología , Metionina/farmacología , Fenoles/farmacología , Especies Reactivas de Oxígeno/metabolismo , Amiloide/química , Amiloide/metabolismo , Catequina/análogos & derivados , Catequina/farmacología , Curcumina/farmacología , Humanos , Técnicas In Vitro , Polipéptido Amiloide de los Islotes Pancreáticos , Cinética , Modelos Biológicos , Peróxidos/metabolismo , Polifenoles , Unión Proteica/efectos de los fármacos , Factores de Tiempo
14.
Biophys J ; 95(4): 1928-44, 2008 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-18456828

RESUMEN

Cholinesterase-like adhesion molecules (CLAMs) are a family of neuronal cell adhesion molecules with important roles in synaptogenesis, and in maintaining structural and functional integrity of the nervous system. Our earlier study on the cytoplasmic domain of one of these CLAMs, the Drosophila protein, gliotactin, showed that it is intrinsically unstructured in vitro. Bioinformatic analysis suggested that the cytoplasmic domains of other CLAMs are also intrinsically unstructured, even though they bear no sequence homology to each other or to any known protein. In this study, we overexpress and purify the cytoplasmic domain of human neuroligin 3, notwithstanding its high sensitivity to the Escherichia coli endogenous proteases that cause its rapid degradation. Using bioinformatic analysis, sensitivity to proteases, size exclusion chromatography, fluorescence correlation spectroscopy, analytical ultracentrifugation, small angle x-ray scattering, circular dichroism, electron spin resonance, and nuclear magnetic resonance, we show that the cytoplasmic domain of human neuroligin 3 is intrinsically unstructured. However, several of these techniques indicate that it is not fully extended, but becomes significantly more extended under denaturing conditions.


Asunto(s)
Moléculas de Adhesión Celular/química , Citoplasma/química , Proteínas de la Membrana/química , Proteínas de la Membrana/ultraestructura , Modelos Químicos , Modelos Moleculares , Proteínas del Tejido Nervioso/química , Proteínas del Tejido Nervioso/ultraestructura , Biofisica/métodos , Moléculas de Adhesión Celular Neuronal , Simulación por Computador , Humanos , Conformación Proteica , Estructura Terciaria de Proteína
15.
J Med Chem ; 51(1): 126-34, 2008 Jan 10.
Artículo en Inglés | MEDLINE | ID: mdl-18078312

RESUMEN

Affecting an estimated 5% of adults over 65 years of age, Parkinson's disease and Alzheimer's disease are the most common neurodegenerative disorders. Accumulating evidence suggests that oxidative stress induced by the breakdown of iron homeostasis is a major contributor to the neuronal loss observed in neurodegeneration. Thus, brain-permeable iron chelators may present potential therapeutic benefits. In the present study, iron-chelating hydroxamate groups were introduced into the NAP (NAPVSIPQ) peptide, whose neuroprotective qualities have been widely demonstrated. Our experiments revealed that the novel dihydroxamate peptide 3 is capable of inhibiting iron-catalyzed hydroxyl radical formation and lipid peroxidation, abilities that are not part of the repertoire of its parent peptide. In addition, peptide 3 was superior to native NAP in protecting human neuroblastoma cell cultures against the toxicity of hydrogen peroxide. These results suggest that NAP-based iron chelators deserve further investigation in the search for drug candidates for neurodegeneration.


Asunto(s)
Antioxidantes/síntesis química , Ácidos Hidroxámicos/síntesis química , Quelantes del Hierro/síntesis química , Fármacos Neuroprotectores/síntesis química , Oligopéptidos/síntesis química , Animales , Antioxidantes/química , Antioxidantes/farmacología , Línea Celular Tumoral , Supervivencia Celular/efectos de los fármacos , Compuestos Férricos/química , Compuestos Ferrosos/química , Humanos , Peróxido de Hidrógeno/farmacología , Ácidos Hidroxámicos/química , Ácidos Hidroxámicos/farmacología , Radical Hidroxilo/química , Técnicas In Vitro , Quelantes del Hierro/química , Quelantes del Hierro/farmacología , Peroxidación de Lípido/efectos de los fármacos , Masculino , Fármacos Neuroprotectores/química , Fármacos Neuroprotectores/farmacología , Oligopéptidos/química , Oligopéptidos/farmacología , Estrés Oxidativo , Ratas , Ratas Sprague-Dawley
16.
Bioorg Med Chem ; 16(14): 6789-98, 2008 Jul 15.
Artículo en Inglés | MEDLINE | ID: mdl-18571926

RESUMEN

We synthesized two carminic acid (7-alpha-d-glucopyranosyl-9,10-dihydro-3,5,6,8-tetrahydroxy-1-methyl-9,10-dioxo-2-anthracene carboxlic acid, CA)-GnRH conjugates to be used as a model for potential photoactive targeted compounds. CA was conjugated to the epsilon-amino group of [d-Lys(6)]GnRH through its carboxylic moiety or via a beta-alanine spacer (beta-ala). Redox potentials of CA and its conjugates were determined. We used electron spin resonance (ESR) and spin trapping techniques to study the light-stimulated redox properties of CA and its CA-GnRH conjugates. Upon irradiation, the compounds stimulated the formation of reactive oxygen species (ROS), that is, singlet oxygen ((1)O(2)) and oxygen radicals (O(2)(-*) and OH(*)). Both conjugates exhibited higher ROS production than the non-conjugated CA. The bioactivity properties of the CA conjugates and the parent peptide, [d-Lys(6)]GnRH, were tested on primary rat pituitary cells. We found that the conjugates preserved the bioactivity of GnRH as illustrated by their capability to induce ERK phosphorylation and LH release.


Asunto(s)
Carmín/análogos & derivados , Hormona Liberadora de Gonadotropina/química , Hipófisis/efectos de los fármacos , Especies Reactivas de Oxígeno/metabolismo , Animales , Carmín/química , Células Cultivadas , Espectroscopía de Resonancia por Spin del Electrón , Quinasas MAP Reguladas por Señal Extracelular/metabolismo , Radicales Libres , Hormona Luteinizante/metabolismo , Oxidación-Reducción , Fosforilación , Fotoquímica , Hipófisis/citología , Hipófisis/metabolismo , Ratas , Oxígeno Singlete
18.
Curr Med Chem ; 25(40): 5528-5539, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-29303072

RESUMEN

In this review, we first survey the mechanisms underlying the chemical modification of amino acid residues in proteins by singlet oxygen elicited by photosensitizers. Singlet oxygen has the capacity to cause widespread chemical damage to cellular proteins. Its use in photodynamic therapy of tumors thus requires the development of methodologies for specific addressing of the photosensitizer to malignant cells while sparing normal tissue. We describe three targeting paradigms for achieving this objective. The first involves the use of a photosensitizer with a high affinity for its target protein; in this case, the photosensitizer is methylene blue for acetylcholinesterase. The second paradigm involves the use of the hydrophobic photosensitizer hypericin, which has the capacity to interact selectively with partially unfolded forms of proteins, including nascent species in rapidly dividing or virus-infected and cancer cells, acting preferentially at membrane interfaces. In this case, partially unfolded molten globule species of acetylcholinesterase serve as the model system. In the third paradigm, the photodynamic approach takes advantage of a general approach in 'state-of-the-art' chemotherapy, by coupling the photosensitizer emodin to a specific peptide hormone, GnRH, which recognizes malignant cells via specific GnRH receptors on their surface.


Asunto(s)
Acetilcolinesterasa/metabolismo , Azul de Metileno/farmacología , Neoplasias/tratamiento farmacológico , Neoplasias/metabolismo , Fármacos Fotosensibilizantes/farmacología , Especies Reactivas de Oxígeno/metabolismo , Humanos , Azul de Metileno/química , Neoplasias/patología , Fotoquimioterapia , Fármacos Fotosensibilizantes/química
19.
Antioxid Redox Signal ; 28(15): 1394-1403, 2018 05 20.
Artículo en Inglés | MEDLINE | ID: mdl-29161882

RESUMEN

SIGNIFICANCE: Chemotherapy is currently the principal method for treating many malignancies. Thus, the development of improved antitumor drugs with enhanced efficacy and selectivity remains a high priority. Recent Advances: Anthracycline antibiotics (AAs), for example, doxorubicin, daunomycin, and mitomycin C, belong to an important family of antitumor agents widely used in chemotherapy. These compounds are all quinones. They are, thus, capable of being reduced by appropriate chemicals or reductases. One of their important properties is that under aerobic conditions their reduced forms undergo oxidation, with concomitant generation of reactive oxygen species (ROS), namely, superoxide anion radicals, hydrogen peroxide, and hydroxyl radicals. The presence of metal ions is essential for the generation of ROS by AAs in biological systems. CRITICAL ISSUES: A fundamental shortcoming of the AAs is their high cardiotoxicity. We have proposed, and experimentally realized, a new type of quinones that is capable of coordinating metal ions. We have demonstrated in vitro that they can be reduced by electron transfer chains and glutathione with concomitant generation of ROS. They can also produce ROS under photo-excitation. The mechanisms of these reactions have been characterized by using nuclear magnetic resonance and electron paramagnetic resonance. FUTURE DIRECTIONS: To enhance their therapeutic effectiveness, and decrease cardiotoxicity and other side effects, we intend to conjugate the quinone chelators with monoclonal antibodies and peptide hormones that are specifically targeted to receptors on the cancer cell surface. Some such candidates have already been synthesized. An alternative approach for delivery of our compounds involves the use of specific peptide-based nanoparticles. In addition, our novel approach for treating malignancies is also suitable for photodynamic therapy. Antioxid. Redox Signal. 28, 1394-1403.


Asunto(s)
Antibióticos Antineoplásicos/química , Antibióticos Antineoplásicos/farmacología , Benzoquinonas/química , Benzoquinonas/farmacología , Neoplasias/tratamiento farmacológico , Oxidación-Reducción/efectos de los fármacos , Espectroscopía de Resonancia por Spin del Electrón/métodos , Humanos , Especies Reactivas de Oxígeno/metabolismo
20.
Photochem Photobiol ; 83(5): 1270-7, 2007.
Artículo en Inglés | MEDLINE | ID: mdl-17880523

RESUMEN

Incorporation of photodynamic therapy into clinical practice for induction of vascular photo-occlusion highlights the need to prevent adverse phototoxicity to sensitive juxtaposed tissues, particularly in the retina. We developed a system termed "competitive quenching" to prevent adverse phototoxic damage. It involves differential compartmentalization of a photoactivator to the intravascular compartment for photoexcitation and delivery of phototoxicity to targeted vessels. A different photodynamic agent is partitioned to the extravascular retinal space to quench reactive oxygen species generated by photosensitization, thereby protecting the adjacent retinal tissues from adverse phototoxicity. The absorption spectra of quenchers must span wavelengths that are shorter and excluded from the spectral range of photoexcitation light to prevent photoactivation of the quencher. Perihydroxylated perylenequinones were found to be suitable to function as "competitive quenchers" with the prototype hypericin identified as a potent quencher. Here we examined the mechanisms operative in competitive quenching and suggest that hypericin forms a complex with verteporfin, thereby quenching singlet oxygen formation. Furthermore, we show that hypericin, with six phenolic hydroxyls, protects retinal and endothelial hybridoma cells from phototoxicity more effectively than the dimethyl tetrahydroxy helianthrone structural analog with only four such phenolic hydroxyls. The findings suggest that hydroxyl numbers contribute to the efficacy of competitive quenching.


Asunto(s)
Fármacos Fotosensibilizantes/toxicidad , Porfirinas/toxicidad , Quinonas/farmacología , Línea Celular , Hidroxilación , Retina/efectos de los fármacos , Verteporfina
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