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1.
Cell Mol Life Sci ; 79(4): 214, 2022 Mar 28.
Artículo en Inglés | MEDLINE | ID: mdl-35347434

RESUMEN

Plasmalogens are an abundant class of glycerophospholipids in the mammalian body, with special occurrence in the brain and in immune cell membranes. Plasmanylethanolamine desaturase (PEDS1) is the final enzyme of plasmalogen biosynthesis, which introduces the characteristic 1-O-alk-1'-enyl double bond. The recent sequence identification of PEDS1 as transmembrane protein 189 showed that its protein sequence is related to a special class of plant desaturases (FAD4), with whom it shares a motif of 8 conserved histidines, which are essential for the enzymatic activity. In the present work, we wanted to gain more insight into the sequence-function relationship of this enzyme and mutated to alanine additional 28 amino acid residues of murine plasmanylethanolamine desaturase including those 20 residues, which are also totally conserved-in addition to the eight-histidine-motif-among the animal PEDS1 and plant FAD4 plant desaturases. We measured the enzymatic activity by transient transfection of tagged murine PEDS1 expression clones to a PEDS1-deficient human HAP1 cell line by monitoring of labeled plasmalogens formed from supplemented 1-O-pyrenedecyl-sn-glycerol in relation to recombinant protein expression. Surprisingly, only a single mutation, namely aspartate 100, led to a total loss of PEDS1 activity. The second strongest impact on enzymatic activity had mutation of phenylalanine 118, leaving only 6% residual activity. A structural model obtained by homology modelling to available structures of stearoyl-CoA reductase predicted that this aspartate 100 residue interacts with histidine 96, and phenylalanine 118 interacts with histidine 187, both being essential histidines assumed to be involved in the coordination of the di-metal center of the enzyme.


Asunto(s)
Ácido Aspártico , Oxidorreductasas , Secuencia de Aminoácidos , Animales , Humanos , Mamíferos/metabolismo , Ratones , Oxidorreductasas/metabolismo , Plantas/metabolismo
2.
Proc Natl Acad Sci U S A ; 117(14): 7792-7798, 2020 04 07.
Artículo en Inglés | MEDLINE | ID: mdl-32209662

RESUMEN

A significant fraction of the glycerophospholipids in the human body is composed of plasmalogens, particularly in the brain, cardiac, and immune cell membranes. A decline in these lipids has been observed in such diseases as Alzheimer's and chronic obstructive pulmonary disease. Plasmalogens contain a characteristic 1-O-alk-1'-enyl ether (vinyl ether) double bond that confers special biophysical, biochemical, and chemical properties to these lipids. However, the genetics of their biosynthesis is not fully understood, since no gene has been identified that encodes plasmanylethanolamine desaturase (E.C. 1.14.99.19), the enzyme introducing the crucial alk-1'-enyl ether double bond. The present work identifies this gene as transmembrane protein 189 (TMEM189). Inactivation of the TMEM189 gene in human HAP1 cells led to a total loss of plasmanylethanolamine desaturase activity, strongly decreased plasmalogen levels, and accumulation of plasmanylethanolamine substrates and resulted in an inability of these cells to form labeled plasmalogens from labeled alkylglycerols. Transient expression of TMEM189 protein, but not of other selected desaturases, recovered this deficit. TMEM189 proteins contain a conserved protein motif (pfam10520) with eight conserved histidines that is shared by an alternative type of plant desaturase but not by other mammalian proteins. Each of these histidines is essential for plasmanylethanolamine desaturase activity. Mice homozygous for an inactivated Tmem189 gene lacked plasmanylethanolamine desaturase activity and had dramatically lowered plasmalogen levels in their tissues. These results assign the TMEM189 gene to plasmanylethanolamine desaturase and suggest that the previously characterized phenotype of Tmem189-deficient mice may be caused by a lack of plasmalogens.


Asunto(s)
Lípidos/genética , Oxidorreductasas/genética , Plasmalógenos/genética , Enzimas Ubiquitina-Conjugadoras/genética , Enfermedad de Alzheimer/genética , Enfermedad de Alzheimer/metabolismo , Enfermedad de Alzheimer/patología , Animales , Línea Celular , Humanos , Ratones , Oxidación-Reducción , Oxidorreductasas/metabolismo , Fenotipo , Plasmalógenos/metabolismo , Enzimas Ubiquitina-Conjugadoras/metabolismo , Compuestos de Vinilo/metabolismo
3.
J Lipid Res ; 63(6): 100222, 2022 06.
Artículo en Inglés | MEDLINE | ID: mdl-35537527

RESUMEN

Little is known about the physiological role of alkylglycerol monooxygenase (AGMO), the only enzyme capable of cleaving the 1-O-alkyl ether bond of ether lipids. Expression and enzymatic activity of this enzyme can be detected in a variety of tissues including adipose tissue. This labile lipolytic membrane-bound protein uses tetrahydrobiopterin as a cofactor, and mice with reduced tetrahydrobiopterin levels have alterations in body fat distribution and blood lipid concentrations. In addition, manipulation of AGMO in macrophages led to significant changes in the cellular lipidome, and alkylglycerolipids, the preferred substrates of AGMO, were shown to accumulate in mature adipocytes. Here, we investigated the roles of AGMO in lipid metabolism by studying 3T3-L1 adipogenesis. AGMO activity was induced over 11 days using an adipocyte differentiation protocol. We show that RNA interference-mediated knockdown of AGMO did not interfere with adipocyte differentiation or affect lipid droplet formation. Furthermore, lipidomics revealed that plasmalogen phospholipids were preferentially accumulated upon Agmo knockdown, and a significant shift toward longer and more polyunsaturated acyl side chains of diacylglycerols and triacylglycerols could be detected by mass spectrometry. Our results indicate that alkylglycerol catabolism has an influence not only on ether-linked species but also on the degree of unsaturation in the massive amounts of triacylglycerols formed during in vitro 3T3-L1 adipocyte differentiation.


Asunto(s)
Éter , Lipidómica , Células 3T3-L1 , Adipocitos/metabolismo , Adipogénesis , Animales , Diferenciación Celular , Éter/metabolismo , Éteres , Metabolismo de los Lípidos/genética , Ratones , Fosfolípidos/metabolismo , Triglicéridos/metabolismo
4.
BMC Public Health ; 22(1): 2080, 2022 11 15.
Artículo en Inglés | MEDLINE | ID: mdl-36380311

RESUMEN

BACKGROUND: European countries are increasingly harmonising their organ donation and transplantation policies. Although a growing number of nations are moving to presumed consent to deceased organ donation, no attempts have been made to harmonise policies on individual consent and the role of the family in the decision-making process. Little is known about public awareness of and attitudes towards the role of the family in their own country and European harmonisation on these health policy dimensions. To improve understanding of these issues, we examined what university students think about the role of the family in decision-making in deceased organ donation and about harmonising consent policies within Europe. METHODS: Using LimeSurvey© software, we conducted a comparative cross-sectional international survey of 2193 university students of health sciences and humanities/social sciences from Austria (339), Belgium (439), Denmark (230), Germany (424), Greece (159), Romania (190), Slovenia (190), and Spain (222). RESULTS: Participants from opt-in countries may have a better awareness of the family's legal role than those from opt-out countries. Most respondents opposed the family veto, but they were more ambivalent towards the role of the family as a surrogate decision-maker. The majority of participants were satisfied with the family's legal role. However, those who were unsatisfied preferred to limit family involvement. Overall, participants were opposed to the idea of national sovereignty over consent policies. They favoured an opt-out policy harmonisation and were divided over opt-in. Their views on harmonisation of family involvement were consistent with their personal preferences. CONCLUSIONS: There is overall division on whether families should have a surrogate role, and substantial opposition to granting them sole authority over decision-making. If European countries were to harmonise their policies on consent for organ donation, an opt-out system that grants families a surrogate decision-making role may enjoy the widest public support.


Asunto(s)
Donantes de Tejidos , Obtención de Tejidos y Órganos , Humanos , Estudios Transversales , Toma de Decisiones , Política de Salud , Estudiantes , Familia
5.
Dev World Bioeth ; 20(1): 27-37, 2020 03.
Artículo en Inglés | MEDLINE | ID: mdl-31368637

RESUMEN

The effective collection and management of personal data of rapidly migrating populations is important for ensuring adequate healthcare and monitoring of a displaced peoples' health status. With developments in ICT data sharing capabilities, electronic personal health records (ePHRs) are increasingly replacing less transportable paper records. ePHRs offer further advantages of improving accuracy and completeness of information and seem tailored for rapidly displaced and mobile populations. Various emerging initiatives in Europe are seeking to develop migrant-centric ePHR responses. This paper highlights their importance and benefits, but also identifies a number of significant ethical, legal and social issues (ELSI) and challenges to their design and implementation, regarding (1) the kind of information that should be stored, (2) who should have access to information, and (3) potential misuse of information. These challenges need to be urgently addressed to make possible the beneficial use of ePHRs for vulnerable migrants in Europe.


Asunto(s)
Registros Electrónicos de Salud/ética , Registros Electrónicos de Salud/legislación & jurisprudencia , Registros de Salud Personal/ética , Refugiados , Migrantes , Europa (Continente) , Unión Europea , Humanos , Poblaciones Vulnerables
6.
J Lipid Res ; 59(5): 901-909, 2018 05.
Artículo en Inglés | MEDLINE | ID: mdl-29540573

RESUMEN

Plasmanylethanolamine desaturase (PEDS) (EC 1.14.99.19) introduces the 1-prime double bond into plasmalogens, one of the most abundant phospholipids in the human body. This labile membrane enzyme has not been purified and its coding sequence is unknown. Previous assays for this enzyme used radiolabeled substrates followed by multistep processing. We describe here a straight-forward method for the quantification of PEDS in enzyme incubation mixtures using pyrene-labeled substrates and reversed-phase HPLC with fluorescence detection. After stopping the reaction with hydrochloric acid in acetonitrile, the mixture was directly injected into the HPLC system without the need of lipid extraction. The substrate, 1-O-pyrenedecyl-2-acyl-sn-glycero-3-phosphoethanolamine, and the lyso-substrate, 1-O-pyrenedecyl-sn-glycero-3-phosphoethanolamine, were prepared from RAW-12 cells deficient in PEDS activity and were compared for their performance in the assay. Plasmalogen levels in mouse tissues and in cultured cells did not correlate with PEDS levels, indicating that the desaturase might not be the rate limiting step for plasmalogen biosynthesis. Among selected mouse organs, the highest activities were found in kidney and in spleen. Incubation of intact cultivated mammalian cells with 1-O-pyrenedecyl-sn-glycerol, extraction of lipids, and treatment with hydrochloric or acetic acid in acetonitrile allowed sensitive monitoring of PEDS activity in intact cells.


Asunto(s)
Cromatografía Líquida de Alta Presión , Oxidorreductasas/análisis , Plasmalógenos/química , Pirenos/química , Espectrometría de Fluorescencia , Compuestos de Vinilo/química , Animales , Células Cultivadas , Ratones , Estructura Molecular , Oxidorreductasas/deficiencia , Oxidorreductasas/metabolismo , Plasmalógenos/biosíntesis , Pirenos/metabolismo , Especificidad por Sustrato , Compuestos de Vinilo/metabolismo
7.
Proc Natl Acad Sci U S A ; 112(8): 2431-6, 2015 Feb 24.
Artículo en Inglés | MEDLINE | ID: mdl-25675482

RESUMEN

Tetrahydrobiopterin is a cofactor synthesized from GTP with well-known roles in enzymatic nitric oxide synthesis and aromatic amino acid hydroxylation. It is used to treat mild forms of phenylketonuria. Less is known about the role of tetrahydrobiopterin in lipid metabolism, although it is essential for irreversible ether lipid cleavage by alkylglycerol monooxygenase. Here we found intracellular alkylglycerol monooxygenase activity to be an important regulator of alkylglycerol metabolism in intact murine RAW264.7 macrophage-like cells. Alkylglycerol monooxygenase was expressed and active also in primary mouse bone marrow-derived monocytes and "alternatively activated" M2 macrophages obtained by interleukin 4 treatment, but almost missing in M1 macrophages obtained by IFN-γ and lipopolysaccharide treatment. The cellular lipidome of RAW264.7 was markedly changed in a parallel way by modulation of alkylglycerol monooxygenase expression and of tetrahydrobiopterin biosynthesis affecting not only various ether lipid species upstream of alkylglycerol monooxygenase but also other more complex lipids including glycosylated ceramides and cardiolipins, which have no direct connection to ether lipid pathways. Alkylglycerol monooxygenase activity manipulation modulated the IFN-γ/lipopolysaccharide-induced expression of inducible nitric oxide synthase, interleukin-1ß, and interleukin 1 receptor antagonist but not transforming growth factor ß1, suggesting that alkylglycerol monooxygenase activity affects IFN-γ/lipopolysaccharide signaling. Our results demonstrate a central role of tetrahydrobiopterin and alkylglycerol monooxygenase in ether lipid metabolism of murine macrophages and reveal that alteration of alkylglycerol monooxygenase activity has a profound impact on the lipidome also beyond the class of ether lipids.


Asunto(s)
Biopterinas/análogos & derivados , Metabolismo de los Lípidos/efectos de los fármacos , Macrófagos/metabolismo , Oxigenasas de Función Mixta/metabolismo , Animales , Biopterinas/farmacología , Células de la Médula Ósea/citología , Diferenciación Celular/efectos de los fármacos , Línea Celular , Células Cultivadas , Análisis por Conglomerados , GTP Ciclohidrolasa/metabolismo , Técnicas de Silenciamiento del Gen , Interferón gamma/farmacología , Lentivirus/metabolismo , Lipopolisacáridos/farmacología , Macrófagos/citología , Macrófagos/efectos de los fármacos , Macrófagos/enzimología , Ratones , Monocitos/citología , Monocitos/efectos de los fármacos , Monocitos/enzimología , Óxido Nítrico Sintasa de Tipo II/metabolismo
8.
Camb Q Healthc Ethics ; 25(3): 497-504, 2016 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-27348834

RESUMEN

Assisted reproductive technologies (ARTs) and reproductive genetic technologies (RGTs) are intertwined and coevolving. These technologies are increasingly used to fulfill socially and culturally framed requests, for example, "family balancing," or to enable postmenopausal women or homosexual couples to have genetically linked children. The areas of ART and RGT are replete with ethical issues, because different social practices and legal regulations, as well as economic inequalities within and among countries, create vulnerable groups and, therefore, the potential for exploitation. This article provides an overview of the ART and RGT landscape in Pakistan and analyzes the available online content addressing Pakistani citizens and international clients. We explored the topic in view of socioeconomic challenges in Pakistan, particularly deeply rooted poverty, lack of education, gender discrimination, and absence of regulation. As online information given by ART and RGT providers is readily available and could easily raise false hopes, make use of discriminatory statements with regard to women, and promote gender selection to meet sociocultural expectations, it should be subjected to quality control.


Asunto(s)
Análisis Ético , Técnicas Genéticas/ética , Técnicas Reproductivas Asistidas/ética , Femenino , Humanos , Pakistán , Pobreza , Factores Socioeconómicos , Poblaciones Vulnerables
9.
Biochem J ; 443(1): 279-86, 2012 Apr 01.
Artículo en Inglés | MEDLINE | ID: mdl-22220568

RESUMEN

Alkylglycerol mono-oxygenase (EC 1.14.16.5) forms a third, distinct, class among tetrahydrobiopterin-dependent enzymes in addition to aromatic amino acid hydroxylases and nitric oxide synthases. Its protein sequence contains the fatty acid hydroxylase motif, a signature indicative of a di-iron centre, which contains eight conserved histidine residues. Membrane enzymes containing this motif, including alkylglycerol mono-oxygenase, are especially labile and so far have not been purified to homogeneity in active form. To obtain a first insight into structure-function relationships of this enzyme, we performed site-directed mutagenesis of 26 selected amino acid residues and expressed wild-type and mutant proteins containing a C-terminal Myc tag together with fatty aldehyde dehydrogenase in Chinese-hamster ovary cells. Among all of the acidic residues within the eight-histidine motif, only mutation of Glu137 to alanine led to an 18-fold increase in the Michaelis-Menten constant for tetrahydrobiopterin, suggesting a role in tetrahydrobiopterin interaction. A ninth additional histidine residue essential for activity was also identified. Nine membrane domains were predicted by four programs: ESKW, TMHMM, MEMSAT and Phobius. Prediction of a part of the structure using the Rosetta membrane ab initio method led to a plausible suggestion for a structure of the catalytic site of alkylglycerol mono-oxygenase.


Asunto(s)
Biopterinas/análogos & derivados , Oxigenasas de Función Mixta/química , Secuencia de Aminoácidos , Sustitución de Aminoácidos , Animales , Biopterinas/química , Células CHO , Dominio Catalítico , Simulación por Computador , Secuencia de Consenso , Cricetinae , Humanos , Hierro/química , Cinética , Oxigenasas de Función Mixta/genética , Modelos Moleculares , Mutagénesis Sitio-Dirigida , Unión Proteica , Estabilidad Proteica , Estructura Secundaria de Proteína , Proteínas Recombinantes/química , Proteínas Recombinantes/genética
10.
Proc Natl Acad Sci U S A ; 107(31): 13672-7, 2010 Aug 03.
Artículo en Inglés | MEDLINE | ID: mdl-20643956

RESUMEN

Alkylglycerol monooxygenase (glyceryl-ether monooxygenase, EC 1.14.16.5) is the only enzyme known to cleave the O-alkyl bond of ether lipids which are essential components of brain membranes, protect the eye from cataract, interfere or mediate signalling processes, and are required for spermatogenesis. Along with phenylalanine hydroxylase, tyrosine hydroxylase, tryptophan hydroxylase, and nitric oxide synthase, alkylglycerol monooxygenase is one of five known enzymatic reactions which depend on tetrahydrobiopterin. Although first described in 1964, no sequence had been assigned to this enzyme so far since it lost activity upon protein purification attempts. A functional library screen using pools of plasmids of a rat liver expression library transfected to CHO cells was also unsuccessful. We therefore selected human candidate genes by bioinformatic approaches and by proteomic analysis of partially purified enzyme and tested alkylglycerol monooxygenase activity in CHO cells transfected with expression plasmids. Transmembrane protein 195, a predicted membrane protein with unassigned function which occurs in bilateral animals, was found to encode for tetrahydrobiopterin-dependent alkylglycerol monooxygenase. This sequence assignment was confirmed by injection of transmembrane protein 195 cRNA into Xenopus laevis oocytes. Transmembrane protein 195 shows no sequence homology to aromatic amino acid hydroxylases or nitric oxide synthases, but contains the fatty acid hydroxylase motif. This motif is found in enzymes which contain a diiron center and which carry out hydroxylations of lipids at aliphatic carbon atoms like alkylglycerol monooxygenase. This sequence assignment suggests that alkylglycerol monooxygenase forms a distinct third group among tetrahydrobiopterin-dependent enzymes.


Asunto(s)
Biopterinas/análogos & derivados , Oxigenasas de Función Mixta/metabolismo , Aldehído Oxidorreductasas/genética , Aldehído Oxidorreductasas/metabolismo , Animales , Biopterinas/metabolismo , Células CHO , Biología Computacional , Cricetinae , Cricetulus , Humanos , Proteínas de la Membrana/genética , Proteínas de la Membrana/metabolismo , Oxigenasas de Función Mixta/genética , Ratas , Xenopus laevis
11.
Artículo en Inglés | MEDLINE | ID: mdl-36690320

RESUMEN

Alkylglycerol monooxygenase (AGMO) and plasmanylethanolamine desaturase (PEDS1) are enzymes involved in ether lipid metabolism. While AGMO degrades plasmanyl lipids by oxidative cleavage of the ether bond, PEDS1 exclusively synthesizes a specific subclass of ether lipids, the plasmalogens, by introducing a vinyl ether double bond into plasmanylethanolamine phospholipids. Ether lipids are characterized by an ether linkage at the sn-1 position of the glycerol backbone and they are found in membranes of different cell types. Decreased plasmalogen levels have been associated with neurological diseases like Alzheimer's disease. Agmo-deficient mice do not present an obvious phenotype under unchallenged conditions. In contrast, Peds1 knockout mice display a growth phenotype. To investigate the molecular consequences of Agmo and Peds1 deficiency on the mouse lipidome, five tissues from each mouse model were isolated and subjected to high resolution mass spectrometry allowing the characterization of up to 2013 lipid species from 42 lipid subclasses. Agmo knockout mice moderately accumulated plasmanyl and plasmenyl lipid species. Peds1-deficient mice manifested striking changes characterized by a strong reduction of plasmenyl lipids and a concomitant massive accumulation of plasmanyl lipids resulting in increased total ether lipid levels in the analyzed tissues except for the class of phosphatidylethanolamines where total levels remained remarkably constant also in Peds1 knockout mice. The rate-limiting enzyme in ether lipid metabolism, FAR1, was not upregulated in Peds1-deficient mice, indicating that the selective loss of plasmalogens is not sufficient to activate the feedback mechanism observed in total ether lipid deficiency.


Asunto(s)
Metabolismo de los Lípidos , Plasmalógenos , Animales , Ratones , Plasmalógenos/metabolismo , Lipidómica , Éteres , Ratones Noqueados
12.
J Lipid Res ; 53(7): 1410-6, 2012 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-22508945

RESUMEN

The lack of fatty aldehyde dehydrogenase function in Sjögren Larsson Syndrome (SLS) patient cells not only impairs the conversion of fatty aldehydes into their corresponding fatty acid but also has an effect on connected pathways. Alteration of the lipid profile in these cells is thought to be responsible for severe symptoms such as ichtyosis, mental retardation, and spasticity. Here we present a novel approach to examine fatty aldehyde metabolism in a time-dependent manner by measuring pyrene-labeled fatty aldehyde, fatty alcohol, fatty acid, and alkylglycerol in the culture medium of living cells using HPLC separation and fluorescence detection. Our results show that in fibroblasts from SLS patients, fatty aldehyde is not accumulating but is converted readily into fatty alcohol. In control cells, in contrast, exclusively the corresponding fatty acid is formed. SLS patient cells did not display a hypersensitivity toward hexadecanal or hexadecanol, but 3-fold lower concentrations of the fatty alcohol than the corresponding fatty aldehyde were needed to induce toxicity in SLS patient and in control cells.


Asunto(s)
Aldehídos/metabolismo , Ácidos Grasos/metabolismo , Fibroblastos/metabolismo , Pirenos/química , Síndrome de Sjögren-Larsson/metabolismo , Aldehído Oxidorreductasas/metabolismo , Aldehídos/química , Aldehídos/farmacología , Animales , Células CHO , Células Cultivadas , Cromatografía Líquida de Alta Presión , Cricetinae , Relación Dosis-Respuesta a Droga , Ácidos Grasos/química , Ácidos Grasos/farmacología , Fibroblastos/química , Fibroblastos/efectos de los fármacos , Humanos , Pirenos/metabolismo , Síndrome de Sjögren-Larsson/patología , Relación Estructura-Actividad , Factores de Tiempo
13.
Front Psychol ; 13: 1045144, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-36591015

RESUMEN

Vascularized Composite Allotransplantation (VCA) has evolved in recent years, encompassing hand, face, uterus, penile, and lower extremity transplantation. Accordingly, without centralized oversight by United States Organ Procurement and Transplantation Network (OPTN) or European Programs, centers have developed their own practices and procedures that likely vary, and accordingly, present different levels of rigor to the evaluation process, internationally. The importance of psychosocial factors in the selection process and treatment course has been widely recognized, and therefore, several approaches have been developed to standardize and guide care of VCA candidates and recipients. We propose to develop an international multidisciplinary platform for the exchange of expertise that includes clinical, patient, and research perspectives. Patient perspectives would derive from peer education and the assessment of patient-reported outcomes. To establish a foundation for such a platform, future research should review and combine current VCA protocols, to develop the ethical framework for a standardized psychosocial evaluation and follow-up of VCA candidates and recipients. This review presents a comprehensive overview of recent results in the field of VCA, developments in structural aspects of VCA, and provides viewpoints driven from clinical experience.

14.
Cell Biosci ; 11(1): 54, 2021 Mar 16.
Artículo en Inglés | MEDLINE | ID: mdl-33726865

RESUMEN

BACKGROUND: Genome editing in mice using either classical approaches like homologous recombination or CRISPR/Cas9 has been reported to harbor off target effects (insertion/deletion, frame shifts or gene segment duplications) that lead to mutations not only in close proximity to the target site but also outside. Only the genomes of few engineered mouse strains have been sequenced. Since the role of the ether-lipid cleaving enzyme alkylglycerol monooxygenase (AGMO) in physiology and pathophysiology remains enigmatic, we created a knockout mouse model for AGMO using EUCOMM stem cells but unforeseen genotyping issues that did not agree with Mendelian distribution and enzyme activity data prompted an in-depth genomic validation of the mouse model. RESULTS: We report a gene segment tandem duplication event that occurred during the generation of an Agmo knockout-first allele by homologous recombination. Only low homology was seen between the breakpoints. While a single copy of the recombinant 18 kb cassette was integrated correctly around exon 2 of the Agmo gene, whole genome nanopore sequencing revealed a 94 kb duplication in the Agmo locus that contains Agmo wild-type exons 1-3. The duplication fooled genotyping by routine PCR, but could be resolved using qPCR-based genotyping, targeted locus amplification sequencing and nanopore sequencing. Despite this event, this Agmo knockout mouse model lacks AGMO enzyme activity and can therefore be used to study its physiological role. CONCLUSIONS: A duplication event occurred at the exact locus of the homologous recombination and was not detected by conventional quality control filters such as FISH or long-range PCR over the recombination sites. Nanopore sequencing provides a cost convenient method to detect such underrated off-target effects, suggesting its use for additional quality assessment of gene editing in mice and also other model organisms.

15.
J Lipid Res ; 51(6): 1554-9, 2010 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-19965611

RESUMEN

Fatty aldehyde dehydrogenase (EC 1.2.1.48) converts long-chain fatty aldehydes to the corresponding acids. Deficiency in this enzyme causes the Sjogren Larsson Syndrome, a rare inherited disorder characterized by ichthyosis, spasticity, and mental retardation. Using a fluorescent aldehyde, pyrenedecanal, and HPLC with fluorescence detection, we developed a novel method to monitor fatty aldehyde dehydrogenase activity by quantification of the product pyrenedecanoic acid together with the substrate pyrenedecanal and possible side products, such as aldehyde adducts. As shown with recombinant enzymes, pyrenedecanal showed a high preference for fatty aldehyde dehydrogenase compared with other aldehyde dehydrogenases. The method allowed detection of fatty aldehyde dehydrogenase activity in nanogram amounts of microsomal or tissue protein and microgram amounts of Sjogren Larsson syndrome patients' skin fibroblast protein. It could successfully be adapted for the analysis of fatty aldehyde dehydrogenase activity in gel slices derived from low-temperature SDS-PAGE, showing that fatty aldehyde dehydrogenase activity from solubilized rat liver microsomes migrates as a dimer. Thus, monitoring of pyrenedecanoic acid formation from pyrenedecanal by HPLC with fluorescence detection provides a robust and sensitive method for determination of fatty aldehyde dehydrogenase activity.


Asunto(s)
Aldehído Oxidorreductasas/metabolismo , Aldehídos/metabolismo , Ácidos Decanoicos/metabolismo , Pruebas de Enzimas/métodos , Pirenos/metabolismo , Animales , Células Cultivadas , Cromatografía Líquida de Alta Presión , Cromatografía de Fase Inversa , Electroforesis en Gel de Poliacrilamida , Femenino , Fibroblastos/enzimología , Colorantes Fluorescentes/metabolismo , Humanos , Masculino , Ratones , Movimiento (Física) , Ratas , Temperatura
16.
Biochem J ; 418(3): 691-700, 2009 Mar 15.
Artículo en Inglés | MEDLINE | ID: mdl-19046139

RESUMEN

Physarum polycephalum expresses two closely related, calcium-independent NOSs (nitric oxide synthases). In our previous work, we showed that both NOSs are induced during starvation and apparently play a functional role in sporulation. In the present study, we characterized the genomic structures of both Physarum NOSs, expressed both enzymes recombinantly in bacteria and characterized their biochemical properties. Whereas the overall genomic organization of Physarum NOS genes is comparable with various animal NOSs, none of the exon-intron boundaries are conserved. Recombinant expression of clones with various N-termini identified N-terminal amino acids essential for enzyme activity, but not required for haem binding or dimerization, and suggests the usage of non-AUG start codons for Physarum NOSs. Biochemical characterization of the two Physarum isoenzymes revealed different affinities for L-arginine, FMN and 6R-5,6,7,8-tetrahydro-L-biopterin.


Asunto(s)
Óxido Nítrico Sintasa/metabolismo , Physarum polycephalum/enzimología , Animales , Arginina/metabolismo , Secuencia de Bases , Biopterinas/análogos & derivados , Biopterinas/metabolismo , Mononucleótido de Flavina/metabolismo , Isoenzimas/metabolismo , Datos de Secuencia Molecular , Physarum polycephalum/genética , ARN Mensajero/metabolismo
17.
Am J Bioeth ; 15(12): 49-51, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-26632364
18.
Med Law ; 29(3): 329-39, 2010 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-22145555

RESUMEN

Biomedicine is a fast moving and often challenging research field. To this extent, it seems that preserving one's integrity is becoming more and more complex and occasionally stressful for individual researchers. Highly competitive funding and publication, the commercialization of biomedicine in general, the media hype about some scientific fields, the politicization of research and higher education, and, last but not least, the increasing specialization necessary to deal with increasingly sophisticated experimental systems and technologies are aspects of this complexity. While guidelines and overseeing control boards are important regulatory instruments, which also serve to enhance awareness of scientific integrity and to increase transparency, are not sufficient to maintain and further develop a positive academic climate that motivates the community to adhere to high and consistent professional ethics. Here, scientific misconduct and misbehaviour will be illustrated by referring to well-documented cases and to the need for improving scientific culture, which will be discussed in depth.


Asunto(s)
Cultura , Ciencia , Mala Conducta Científica , Comités de Ética en Investigación , Humanos
19.
Trends Biotechnol ; 38(4): 351-354, 2020 04.
Artículo en Inglés | MEDLINE | ID: mdl-32014274

RESUMEN

As public interest advocates, policy experts, bioethicists, and scientists, we call for a course correction in public discussions about heritable human genome editing. Clarifying misrepresentations, centering societal consequences and concerns, and fostering public empowerment will support robust, global public engagement and meaningful deliberation about altering the genes of future generations.


Asunto(s)
Edición Génica/ética , Genoma Humano/genética , Discusiones Bioéticas , Embrión de Mamíferos , Células Germinativas , Humanos
20.
OMICS ; 23(8): 371-379, 2019 08.
Artículo en Inglés | MEDLINE | ID: mdl-31259670

RESUMEN

In current biomedicine, omics technologies drive systems-oriented modes of research to achieve a more holistic and personalized view of health and disease. This shift in scientific approach co-occurs with an era of biocapitalism characterized by markets for biomaterial (e.g., DNA, cells, and tissues) as exploitable resources, high-throughput technologies as tools, and "Big Data" as currency. Prediagnostics and genomics-based analyses successfully entered the public domain more or less unfiltered, offering numerous business opportunities envisioning individuals to contribute to the health sector by providing biomaterial and data as well as by using technology, thus becoming participants and informed coproducers of health. Exploring strengths and weaknesses, as well as opportunities and threats by S.W.O.T. analysis, we highlight some chances, pitfalls, and biases of this sector from a bioscience ethics stance. We conclude that the shift from diagnostic to predictive interpretation of data that comes along with integrative biology seems to escape the general and sometimes the experts' awareness. Moreover, rapid translation into products for the global health market is based on marketable views on health and disease that in turn affect basic research through, for example, funding policies and the research questions being asked. Along with this, biological reductionism is revived fuelling simplified understandings of the genotype phenotype relationship in terms of biology and the human dimension in a broader sense, as well as visions of achieving human perfection through novel biotechnologies.


Asunto(s)
Macrodatos , Biología Computacional , Biología de Sistemas , Investigación Biomédica , Biología Computacional/ética , Biología Computacional/métodos , Seguridad Computacional , Confidencialidad , Genómica/métodos , Humanos , Medicina de Precisión/métodos , Biología de Sistemas/ética , Biología de Sistemas/métodos
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