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1.
Int J Mol Sci ; 24(12)2023 Jun 17.
Artículo en Inglés | MEDLINE | ID: mdl-37373424

RESUMEN

Oral health is crucial to overall health, and periodontal disease (PDD) is a chronic inflammatory disease. Over the past decade, PDD has been recognized as a significant contributor to systemic inflammation. Here, we relate our seminal work defining the role of lysophosphatidic acid (LPA) and its receptors (LPARs) in the oral system with findings and parallels relevant to cancer. We discuss the largely unexplored fine-tuning potential of LPA species for biological control of complex immune responses and suggest approaches for the areas where we believe more research should be undertaken to advance our understanding of signaling at the level of the cellular microenvironment in biological processes where LPA is a key player so we can better treat diseases such as PDD, cancer, and emerging diseases.


Asunto(s)
Neoplasias , Receptores del Ácido Lisofosfatídico , Humanos , Lisofosfolípidos/fisiología , Transducción de Señal , Inflamación , Microambiente Tumoral
2.
RNA Biol ; 11(4): 324-33, 2014.
Artículo en Inglés | MEDLINE | ID: mdl-24717361

RESUMEN

MicroRNAs (miRNAs) are short RNA molecules that modulate post-transcriptional gene expression by partial or incomplete base-pairing to the complementary sequences on their target genes. Sequence-based miRNA target gene recognition enables the utilization of computational methods, which are highly informative in identifying a subset of putative miRNA targets from the genome. Subsequently, single miRNA-target gene binding is evaluated experimentally by in vitro assays to validate and quantify the transcriptional or post-transcriptional effects of miRNA-target gene interaction. Although ex vivo approaches are instructive in providing a basis for further analyses, in vivo genetic studies are critical to determine the occurrence and biological relevance of miRNA targets under physiological conditions. In the present review, we summarize the important features of each of the experimental approaches, their technical and biological limitations, and future challenges in light of the complexity of miRNA target gene recognition.


Asunto(s)
Biología Computacional/métodos , MicroARNs/genética , Interferencia de ARN , ARN Mensajero/genética , Algoritmos , Animales , Emparejamiento Base , Sitios de Unión , Regulación de la Expresión Génica , Humanos , Técnicas In Vitro , MicroARNs/metabolismo , ARN Mensajero/metabolismo , Programas Informáticos
3.
J Neurosci ; 32(41): 14288-93, 2012 Oct 10.
Artículo en Inglés | MEDLINE | ID: mdl-23055499

RESUMEN

Usher syndrome is the leading cause of genetic deaf-blindness. Monoallelic mutations in PDZD7 increase the severity of Usher type II syndrome caused by mutations in USH2A and GPR98, which respectively encode usherin and GPR98. PDZ domain-containing 7 protein (PDZD7) is a paralog of the scaffolding proteins harmonin and whirlin, which are implicated in Usher type 1 and type 2 syndromes. While usherin and GPR98 have been reported to form hair cell stereocilia ankle-links, harmonin localizes to the stereocilia upper tip-link density and whirlin localizes to both tip and ankle-link regions. Here, we used mass spectrometry to show that PDZD7 is expressed in chick stereocilia at a comparable molecular abundance to GPR98. We also show by immunofluorescence and by overexpression of tagged proteins in rat and mouse hair cells that PDZD7 localizes to the ankle-link region, overlapping with usherin, whirlin, and GPR98. Finally, we show in LLC-PK1 cells that cytosolic domains of usherin and GPR98 can bind to both whirlin and PDZD7. These observations are consistent with PDZD7 being a modifier and candidate gene for USH2, and suggest that PDZD7 is a second scaffolding component of the ankle-link complex.


Asunto(s)
Proteínas Portadoras/química , Redes Reguladoras de Genes/fisiología , Dominios PDZ/fisiología , Estereocilios/química , Síndromes de Usher , Secuencia de Aminoácidos , Animales , Células COS , Proteínas Portadoras/genética , Embrión de Pollo , Chlorocebus aethiops , Femenino , Humanos , Células LLC-PK1 , Masculino , Ratones , Ratones Transgénicos , Datos de Secuencia Molecular , Ratas , Estereocilios/genética , Estereocilios/metabolismo , Porcinos , Síndromes de Usher/genética , Síndromes de Usher/metabolismo
4.
J Neurosci ; 31(24): 8883-93, 2011 Jun 15.
Artículo en Inglés | MEDLINE | ID: mdl-21677172

RESUMEN

Adult mammalian auditory hair cells (HCs) and their associated supporting cells (SCs) do not proliferate, and HC death leads to irreversible neurosensory hearing loss and balance impairment. In nonmammalian vertebrates, loss of HCs induces mitotic proliferation of adjacent nonsensory SCs and/or direct SC transdifferentiation to generate replacement cells. This results in the structural and functional recovery of the nonmammalian sensory systems. Potential replacement of mammalian auditory HCs, either by transplanting cells or by transforming existing cells through molecular therapy, has long been proposed. However, HC replacement strategies with clear therapeutic potential remain elusive. The retinoblastoma (pRB) family of cell cycle regulators, Rb1, Rbl1 (p107), and Rbl2 (p130), regulate the G(1)- to S-phase transition in proliferating cells. In the inner ear, the biochemical and molecular pathways involving pRBs, particularly p107 and p130, are relatively unexplored and their therapeutic suitability is yet to be determined. In this study, we analyzed the cochleae of adult p130 knock-out (p130(-/-)) mice and showed that lack of the p130 gene results in extra rows of HCs and SCs in the more apical regions of the cochlea. No evidence of transdifferentiation of these supernumerary SCs into HCs was observed in the p130(-/-) mouse. Nevertheless, unscheduled proliferation of SCs in the adult p130(-/-) cochlea coupled to downregulation of bona fide cell cycle inhibitors provides a mechanistic basis for the role of p130 as a regulator of SC and HC mitotic quiescence in the more apical regions of the cochlea. Interestingly, p130(-/-) mice exhibited nearly normal peripheral auditory sensitivity.


Asunto(s)
Oído Interno/citología , Células Ciliadas Auditivas Internas/fisiología , Células Laberínticas de Soporte/fisiología , Proteína de Retinoblastoma/deficiencia , Estimulación Acústica , Factores de Edad , Animales , Animales Recién Nacidos , Proliferación Celular , Oído Interno/embriología , Embrión de Mamíferos , Potenciales Evocados Auditivos del Tronco Encefálico/genética , Femenino , Regulación del Desarrollo de la Expresión Génica/genética , Inmunoprecipitación , Masculino , Ratones , Ratones Endogámicos C57BL , Ratones Noqueados , Miosina VIIa , Miosinas/metabolismo , Emisiones Otoacústicas Espontáneas/genética , Receptores de Factor de Crecimiento Nervioso/metabolismo , Factores de Transcripción SOXB1/metabolismo , Tubulina (Proteína)/metabolismo
5.
Dev Dyn ; 240(4): 808-19, 2011 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-21360794

RESUMEN

MicroRNAs (miRNAs) post-transcriptionally repress complementary target gene expression and can contribute to cell differentiation. The coordinate expression of miRNA-183 family members (miR-183, miR-96, and miR-182) has been demonstrated in sensory cells of the mouse inner ear and other vertebrate sensory organs. To further examine hair cell miRNA expression in the mouse inner ear, we have analyzed miR-183 family expression in wild type animals and various mutants with defects in neurosensory development. miR-183 family member expression follows neurosensory cell specification, exhibits longitudinal (basal-apical) gradients in maturating cochlear hair cells, and is maintained in sensory neurons and most hair cells into adulthood. Depletion of hair cell miRNAs resulting from Dicer1 conditional knockout (CKO) in Atoh1-Cre transgenic mice leads to more disparate basal-apical gene expression profiles and eventual hair cell loss. Results suggest that hair cell miRNAs subdue cochlear gradient gene expression and are required for hair cell maintenance and survival.


Asunto(s)
Diferenciación Celular/genética , Proliferación Celular , Células Ciliadas Auditivas/fisiología , MicroARNs/fisiología , Animales , Supervivencia Celular/genética , Supervivencia Celular/fisiología , Células Cultivadas , Análisis por Conglomerados , Embrión de Mamíferos , Perfilación de la Expresión Génica , Regulación del Desarrollo de la Expresión Génica , Células Ciliadas Auditivas/metabolismo , Humanos , Ratones , Ratones Noqueados , MicroARNs/genética , MicroARNs/metabolismo , Análisis por Micromatrices , Familia de Multigenes/genética , Familia de Multigenes/fisiología , Células Neuroepiteliales/metabolismo , Células Neuroepiteliales/fisiología
6.
Dev Biol ; 328(2): 328-41, 2009 Apr 15.
Artículo en Inglés | MEDLINE | ID: mdl-19389351

RESUMEN

Inner ear development requires coordinated transformation of a uniform sheet of cells into a labyrinth with multiple cell types. While numerous regulatory proteins have been shown to play critical roles in this process, the regulatory functions of microRNAs (miRNAs) have not been explored. To demonstrate the importance of miRNAs in inner ear development, we generated conditional Dicer knockout mice by the expression of Cre recombinase in the otic placode at E8.5. Otocyst-derived ganglia exhibit rapid neuron-specific miR-124 depletion by E11.5, degeneration by E12.5, and profound defects in subsequent sensory epithelial innervations by E17.5. However, the small and malformed inner ear at E17.5 exhibits residual and graded hair cell-specific miR-183 expression in the three remaining sensory epithelia (posterior crista, utricle, and cochlea) that closely corresponds to the degree of hair cell and sensory epithelium differentiation, and Fgf10 expression required for morphohistogenesis. The highest miR-183 expression is observed in near-normal hair cells of the posterior crista, whereas the reduced utricular macula demonstrates weak miR-183 expression and develops presumptive hair cells with numerous disorganized microvilli instead of ordered stereocilia. The correlation of differential and delayed depletion of mature miRNAs with the derailment of inner ear development demonstrates that miRNAs are crucial for inner ear neurosensory development and neurosensory-dependent morphogenesis.


Asunto(s)
ARN Helicasas DEAD-box/fisiología , Oído Interno/embriología , Endorribonucleasas/fisiología , MicroARNs/biosíntesis , Animales , Diferenciación Celular , Cóclea/citología , Cóclea/embriología , Cóclea/inervación , ARN Helicasas DEAD-box/genética , Oído Interno/anomalías , Oído Interno/citología , Oído Interno/inervación , Endorribonucleasas/genética , Epitelio/embriología , Epitelio/inervación , Factor 10 de Crecimiento de Fibroblastos/metabolismo , Células Ciliadas Auditivas/citología , Ratones , Ratones Noqueados , Organogénesis , Ribonucleasa III
7.
Hear Res ; 390: 107951, 2020 05.
Artículo en Inglés | MEDLINE | ID: mdl-32244147

RESUMEN

The retinoblastoma family of pocket proteins (pRBs), composed of Rb1, p107, and p130 are negative regulators of cell-cycle progression. The deletion of any individual pRB in the auditory system triggers hair cells' (HCs) and supporting cells' (SCs) proliferation to different extents. Nevertheless, accessing their combined role in the inner ear through conditional or complete knockout methods is limited by the early mortality of the triple knockout. In quiescent cells, hyperphosphorylation and inactivation of the pRBs are maintained through the activity of the Cyclin-D1-cdk4/6 complex. Cyclin D1 (CycD1) is expressed in the embryonic and neonatal inner ear. In the mature organ of Corti (OC), CycD1 expression is significantly downregulated, paralleling the OC mitotic quiescence. Earlier studies showed that CycD1 overexpression leads to cell-cycle reactivation in cultures of inner ear explants. Here, we characterize a Cre-activated, Doxycycline (Dox)-controlled, conditional CycD1 overexpression model, which when bred to a tetracycline-controlled transcriptional activator and the Atoh1-cre mouse lines, allow for transient CycD1 overexpression and pRBs' downregulation in the inner ear in a reversible fashion. Analyses of postnatal mice's inner ears at various time points revealed the presence of supernumerary cells throughout the length of the cochlea and in the vestibular end-organs. Notably, most supernumerary cells were observed in the inner hair cells' (IHCs) region, expressed myosin VIIa (M7a), and showed no signs of apoptosis at any of the time points analyzed. Auditory and vestibular phenotypes were similar between the different genotypes and treatment groups. The fact that no significant differences were observed in auditory and vestibular function supports the notion that the supernumerary cells detected in the adult mice cochlea and macular end-organs may not impair auditory functions.


Asunto(s)
Proliferación Celular , Ciclina D1/metabolismo , Oído Interno/metabolismo , Células Ciliadas Auditivas Internas/metabolismo , Mitosis , Animales , Factores de Transcripción con Motivo Hélice-Asa-Hélice Básico/genética , Factores de Transcripción con Motivo Hélice-Asa-Hélice Básico/metabolismo , Ciclina D1/genética , Oído Interno/citología , Potenciales Evocados Auditivos del Tronco Encefálico , Femenino , Masculino , Ratones Transgénicos , Miosina VIIa/metabolismo , Emisiones Otoacústicas Espontáneas , Fosforilación , Proteína de Retinoblastoma/metabolismo , Transducción de Señal , Factores de Tiempo , Regulación hacia Arriba , Potenciales Vestibulares Miogénicos Evocados
8.
Sci Rep ; 10(1): 1066, 2020 01 23.
Artículo en Inglés | MEDLINE | ID: mdl-31974431

RESUMEN

Invasive candidiasis (IC) is the most common nosocomial infection and a leading cause of mycoses-related deaths. High-systemic toxicity and emergence of antifungal-resistant species warrant the development of newer preventive approaches against IC. Here, we have adopted an immunotherapeutic peptide vaccine-based approach, to enhance the body's immune response against invasive candida infections. Using computational tools, we screened the entire candida proteome (6030 proteins) and identified the most immunodominant HLA class I, HLA class II and B- cell epitopes. By further immunoinformatic analyses for enhanced vaccine efficacy, we selected the 18- most promising epitopes, which were joined together using molecular linkers to create a multivalent recombinant protein against Candida albicans (mvPC). To increase mvPC's immunogenicity, we added a synthetic adjuvant (RS09) to the mvPC design. The selected mvPC epitopes are homologous against all currently available annotated reference sequences of 22 C. albicans strains, thus offering a higher coverage and greater protective response. A major advantage of the current vaccine approach is mvPC's multivalent nature (recognizing multiple-epitopes), which is likely to provide enhanced protection against complex candida antigens. Here, we describe the computational analyses leading to mvPC design.


Asunto(s)
Candida albicans/inmunología , Candidiasis/prevención & control , Vacunas Fúngicas/inmunología , Candida albicans/genética , Candidiasis/genética , Candidiasis/inmunología , Candidiasis/microbiología , Biología Computacional , Simulación por Computador , Diseño de Fármacos , Epítopos de Linfocito B/genética , Epítopos de Linfocito B/inmunología , Vacunas Fúngicas/administración & dosificación , Vacunas Fúngicas/genética , Humanos , Vacunas de Subunidad
9.
J Vis Exp ; (143)2019 01 07.
Artículo en Inglés | MEDLINE | ID: mdl-30663696

RESUMEN

Dominant-negative (DN) protein inhibition is a powerful method to manipulate protein function and offers several advantages over other genome-based approaches. For example, although chimeric and Cre-LoxP targeting strategies have been widely used, the intrinsic limitations of these strategies (i.e., leaky promoter activity, mosaic Cre expression, etc.) have significantly restricted their application. Moreover, a complete deletion of many endogenous genes is embryonically lethal, making it impossible to study gene function in postnatal life. To address these challenges, we have made significant changes to an early genetic engineering protocol and combined a short (transgenic) version of the Rb1 gene with a lysosomal protease procathepsin B (CB), to generate a DN mouse model of Rb1 (CBRb). Due to the presence of a lysosomal protease, the entire CB-RB1 fusion protein and its interacting complex are routed for proteasome-mediated degradation. Moreover, the presence of a tetracycline inducer (rtTA) element in the transgenic construct enables an inducible and reversible regulation of the RB1 protein. The presence of a ubiquitous ROSA-CAG promoter in the CBRb mouse model makes it a useful tool to carry out transient and reversible Rb1 gene ablation and provide researchers a resource for understanding its activity in virtually any cell type where RB1 is expressed.


Asunto(s)
Proteínas/antagonistas & inhibidores , Animales , Ratones , Ratones Transgénicos
10.
Evol Dev ; 10(1): 106-13, 2008.
Artículo en Inglés | MEDLINE | ID: mdl-18184361

RESUMEN

MicroRNAs (miRNAs) are an integral component of the metazoan genome and affect posttranscriptional repression of target messenger RNAs. The extreme phylogenetic conservation of certain miRNAs suggests their ancient origin and crucial function in conserved developmental processes. We demonstrate that highly conserved miRNA-183 orthologs exist in both deuterostomes and protostomes and their expression is predominant in ciliated ectodermal cells and organs. The miRNA-183 family members are expressed in vertebrate sensory hair cells, in innervated regions of invertebrate deuterostomes, and in sensilla of Drosophila and C. elegans. Thus, miRNA-183 family member expression is conserved in possibly homologous but morphologically distinct sensory cells and organs. The results suggest that miR-183 family members contribute specifically to neurosensory development or function, and that extant metazoan sensory organs are derived from cells that share genetic programs of common evolutionary origin.


Asunto(s)
Evolución Molecular , Invertebrados/genética , MicroARNs/metabolismo , Órganos de los Sentidos/metabolismo , Vertebrados/genética , Animales , Cilios/genética , Cilios/metabolismo , Secuencia Conservada , Células Epiteliales/metabolismo , Humanos , Hibridación in Situ , Invertebrados/metabolismo , MicroARNs/química , Filogenia , Órganos de los Sentidos/citología , Alineación de Secuencia , Sintenía , Vertebrados/metabolismo
11.
Evol Dev ; 10(3): 300-15, 2008.
Artículo en Inglés | MEDLINE | ID: mdl-18460092

RESUMEN

Prestin (SLC26A5) is the molecular motor responsible for cochlear amplification by mammalian cochlea outer hair cells and has the unique combined properties of energy-independent motility, voltage sensitivity, and speed of cellular shape change. The ion transporter capability, typical of SLC26A members, was exchanged for electromotility function and is a newly derived feature of the therian cochlea. A putative minimal essential motif for the electromotility motor (meEM) was identified through the amalgamation of comparative genomic, evolution, and structural diversification approaches. Comparisons were done among nonmammalian vertebrates, eutherian mammalian species, and the opossum and platypus. The opossum and platypus SLC26A5 proteins were comparable to the eutherian consensus sequence. Suggested from the point-accepted mutation analysis, the meEM motif spans all the transmembrane segments and represented residues 66-503. Within the eutherian clade, the meEM was highly conserved with a substitution frequency of only 39/7497 (0.5%) residues, compared with 5.7% in SLC26A4 and 12.8% in SLC26A6 genes. Clade-specific substitutions were not observed and there was no sequence correlation with low or high hearing frequency specialists. We were able to identify that within the highly conserved meEM motif two regions, which are unique to all therian species, appear to be the most derived features in the SLC26A5 peptide.


Asunto(s)
Evolución Molecular , Células Ciliadas Auditivas Externas/fisiología , Mamíferos/fisiología , Filogenia , Secuencia de Aminoácidos , Animales , Proteínas de Transporte de Anión , Secuencia de Bases , Análisis por Conglomerados , Biología Computacional , Humanos , Mamíferos/genética , Datos de Secuencia Molecular , Alineación de Secuencia , Especificidad de la Especie , Transportadores de Sulfato , Sintenía/genética
12.
Sci Rep ; 8(1): 3569, 2018 02 23.
Artículo en Inglés | MEDLINE | ID: mdl-29476110

RESUMEN

Germline mutations in Mir96, one of three co-expressed polycistronic miRNA genes (Mir96, Mir182, Mir183), cause hereditary hearing loss in humans and mice. Transgenic FVB/NCrl- Tg(GFAP-Mir183,Mir96,Mir182)MDW1 mice (Tg1MDW), which overexpress this neurosensory-specific miRNA cluster in the inner ear, were developed as a model system to identify, in the aggregate, target genes and biologic processes regulated by the miR-183 cluster. Histological assessments demonstrate Tg1MDW/1MDW homozygotes have a modest increase in cochlear inner hair cells (IHCs). Affymetrix mRNA microarray data analysis revealed that downregulated genes in P5 Tg1MDW/1MDW cochlea are statistically enriched for evolutionarily conserved predicted miR-96, miR-182 or miR-183 target sites. ABR and DPOAE tests from 18 days to 3 months of age revealed that Tg1MDW/1MDW homozygotes develop progressive neurosensory hearing loss that correlates with histologic assessments showing massive losses of both IHCs and outer hair cells (OHCs). This mammalian miRNA misexpression model demonstrates a potency and specificity of cochlear homeostasis for one of the dozens of endogenously co-expressed, evolutionally conserved, small non-protein coding miRNA families. It should be a valuable tool to predict and elucidate miRNA-regulated genes and integrated functional gene expression networks that significantly influence neurosensory cell differentiation, maturation and homeostasis.


Asunto(s)
Pérdida Auditiva Sensorineural/genética , MicroARNs/genética , Animales , Diferenciación Celular/genética , Modelos Animales de Enfermedad , Oído Interno/metabolismo , Oído Interno/patología , Regulación de la Expresión Génica , Células Ciliadas Auditivas Internas/metabolismo , Células Ciliadas Auditivas Internas/patología , Pérdida Auditiva Sensorineural/patología , Homeostasis/genética , Humanos , Ratones , Ratones Transgénicos , Análisis por Micromatrices , ARN Mensajero/genética
13.
Brain Res ; 1111(1): 95-104, 2006 Sep 21.
Artículo en Inglés | MEDLINE | ID: mdl-16904081

RESUMEN

MicroRNAs (miRNAs) are small non-coding RNAs that function through the RNA interference (RNAi) pathway and post-transcriptionally regulate gene expression in eukaryotic organisms. While miRNAs are known to affect cellular proliferation, differentiation, and morphological development, neither their expression nor roles in mammalian inner ear development have been characterized. We have investigated the extent of miRNA expression at various time points throughout maturation of the postnatal mouse inner ear by microarray analysis. Approximately one third of known miRNAs are detected in the inner ear, and their expression persists to adulthood. Expression of such miRNAs is validated by quantitative PCR and northern blot analysis. Further analysis by in situ hybridization demonstrates that certain miRNAs exhibit cell-specific expression patterns in the mouse inner ear. Notably, we demonstrate that miRNAs previously associated with mechanosensory cells in zebrafish are also expressed in hair cells of the auditory and vestibular endorgans. Our results demonstrate that miRNA expression is abundant in the mammalian inner ear and that certain miRNAs are evolutionarily associated with mechanosensory cell development and/or function. The data suggest that miRNAs contribute substantially to genetic programs intrinsic to development and function of the mammalian inner ear and that specific miRNAs might influence formation of sensory epithelia from the primitive otic neuroepithelium.


Asunto(s)
Oído Interno/crecimiento & desarrollo , Oído Interno/metabolismo , Regulación del Desarrollo de la Expresión Génica/genética , Células Ciliadas Auditivas/crecimiento & desarrollo , Células Ciliadas Auditivas/metabolismo , MicroARNs/genética , Animales , Diferenciación Celular/genética , Oído Interno/citología , Células Ciliadas Auditivas/citología , Células Laberínticas de Soporte/citología , Células Laberínticas de Soporte/metabolismo , Ratones , MicroARNs/análisis , MicroARNs/metabolismo , Proteínas del Tejido Nervioso/biosíntesis , Proteínas del Tejido Nervioso/genética , Análisis de Secuencia por Matrices de Oligonucleótidos , Órgano Espiral/citología , Órgano Espiral/crecimiento & desarrollo , Órgano Espiral/metabolismo , Vestíbulo del Laberinto/citología , Vestíbulo del Laberinto/crecimiento & desarrollo , Vestíbulo del Laberinto/metabolismo
14.
J Periodontol ; 86(5): 713-25, 2015 May.
Artículo en Inglés | MEDLINE | ID: mdl-25660500

RESUMEN

BACKGROUND: The small bioactive lipid lysophosphatidic acid (LPA) plays critical roles in both normal physiology and inflammation in many systems. However, its actions are just beginning to be defined in oral biology and pathophysiology. METHODS: Microarray analysis was used to test the hypothesis that human gingival fibroblasts (GFs) would show significant changes in wound-healing and inflammation-related gene transcripts in response to a major human salivary and gingival crevicular fluid LPA species, 18:1, and that they would express transcript for the major LPA-producing enzyme autotaxin. The microarray results were validated for three highly relevant upregulated inflammatory transcripts using quantitative reverse transcription-polymerase chain reaction (QRT-PCR). Liquid chromatography-tandem mass spectrometry was used to assay time-dependent LPA species production by GFs. RESULTS: LPA 18:1 significantly regulated 20 GF novel and 27 known genes linked to the control of inflammation (P ≤0.01). QRT-PCR validation of interleukin (IL)-8, IL-11, and suppressor of cytokine signaling 2 (SOCS2) messenger RNAs confirmed statistically significant differences from control (P ≤0.05). Autotaxin transcript was present, and GFs were found to produce multiple LPA species in a time-dependent manner. CONCLUSIONS: The upregulation of transcripts for known GF proinflammatory (IL-6, IL-8) and anti-inflammatory (IL-11) ILs, along with SOCS2, shows that LPA transiently regulates a complex set of GF genes critical to periodontal wound healing and inflammation. These results implicate LPA exerting actions on GFs that are compatible with functioning as a mediator in oral fibroblast biology and inflammatory responses. Therefore, LPA may potentially modulate/regulate periodontal inflammation.


Asunto(s)
Fibroblastos/efectos de los fármacos , Encía/citología , Lisofosfolípidos/farmacología , Adulto , Células Cultivadas , Femenino , Regulación de la Expresión Génica/efectos de los fármacos , Encía/efectos de los fármacos , Líquido del Surco Gingival/química , Humanos , Inflamación/genética , Mediadores de Inflamación/análisis , Interleucina-11/análisis , Interleucina-6/análisis , Interleucina-8/análisis , Masculino , Hidrolasas Diéster Fosfóricas/análisis , Saliva/química , Transducción de Señal/efectos de los fármacos , Proteínas Supresoras de la Señalización de Citocinas/análisis , Transcripción Genética/efectos de los fármacos
15.
Hum Mutat ; 24(2): 185, 2004 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-15241801

RESUMEN

Usher syndrome type II (USH2) is characterised by moderate to severe high-frequency hearing impairment, progressive visual loss due to retinitis pigmentosa and intact vestibular responses. Three loci are known for USH2, however, only the gene for USH2a (USH2A) has been identified. Mutation analysis of USH2A was performed in 70 Dutch USH2 families. Ten mutations in USH2A were detected, of which three are novel, c.949C>A, c.2242C>T (p.Gln748X) and c.4405C>T (p.Gln1468X). Including 9 previously published Dutch USH2a families, estimates of the prevalence of USH2a in the Dutch USH2 population were made. Mutations were identified in 62% of the families. In 28% both mutated alleles were identified, whereas in 34% the mutation in only one allele was found. It is estimated that about 28% of the Dutch USH2 families have a different causative gene. Analysis of deduced haplotypes suggests that c.1256G>T (p.Cys419Phe) is a Dutch ancestral mutation, occurring in 16% of the alleles.


Asunto(s)
Análisis Mutacional de ADN/métodos , Proteínas de la Matriz Extracelular/genética , Marcadores Genéticos/genética , Haplotipos/genética , Humanos , Países Bajos/epidemiología , Polimorfismo de Nucleótido Simple/genética
16.
Am J Med Genet ; 109(4): 291-7, 2002 May 15.
Artículo en Inglés | MEDLINE | ID: mdl-11992483

RESUMEN

Deafness is the most common form of sensory impairment in humans, affecting about 1 in 1,000 births in the United States. Of those cases with genetic etiology, approximately 80% are nonsyndromic and recessively inherited. Mutations in several unconventional myosins, members of a large superfamily of actin-associated molecular motors, have been found to cause hearing loss in both humans and mice. Mutations in the human unconventional Myosin VIIa (MYO7A), located at 11q13.5, are reported to be responsible for both syndromic and nonsyndromic deafness. MYO7A mutations are responsible for Usher syndrome type Ib, the most common genetic subtype of Usher I. Usher I is clinically characterized by congenital profound deafness, progressive retinal degeneration called retinitis pigmentosa (RP), and vestibular areflexia. Although a wide spectrum of MYO7A mutations have been identified in Usher Ib patients, four mutations have been reported to cause DFNB2, a recessive deafness without retinal degeneration, and one mutation has been implicated in a single case of dominant nonsyndromic hearing loss (DFNA11). Our study attempts to ascertain additional DFNB2 families to investigate the disparate nonsyndromic phenotype and alleged causative mutations. Data from both linkage and heterogeneity analyses on 36 selected autosomal recessive nonsyndromic deafness (RNSD) families, all previously excluded by mutational analysis from GJB2 (Cx26), the leading cause of nonsyndromic deafness, showed no evidence of DFNB2 within the sample. These negative results and the isolated reports of DFNB2 bring into question whether certain MYO7A mutations produce nonsyndromic recessive hearing loss.


Asunto(s)
Pérdida Auditiva Sensorineural/genética , Secuencia de Bases , Cromosomas Humanos Par 11/genética , Conexina 26 , Conexinas , ADN/química , ADN/genética , Análisis Mutacional de ADN , Dineínas , Salud de la Familia , Femenino , Genotipo , Pérdida Auditiva Sensorineural/patología , Humanos , Escala de Lod , Masculino , Repeticiones de Microsatélite , Mutación , Miosina VIIa , Miosinas/genética , Linaje
17.
Otol Neurotol ; 24(1): 58-63, 2003 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-12544030

RESUMEN

OBJECTIVE: To establish the audiometric profile and speech recognition characteristics in 36 Usher IIa patients, carrying one (A) or two (B) pathogenic mutations in the gene. STUDY DESIGN: Family study. SETTING: Tertiary referral center. PATIENTS: Thirty six Usher IIa patients from 21 Dutch families. METHODS: Ophthalmologic, vestibular, and audiometric examinations were performed on all patients. Cross-sectional analysis was performed on pure tone threshold data at 0.25 to 8 kHz and on speech phoneme recognition scores. Progression was evaluated using linear regression analysis on raw and presbyacusis corrected data. RESULTS: A downsloping audiogram was found, with a mean threshold slope of -9 dB per octave, that was mildly progressive, i.e., by approximately 0.5 dB per year. Individual monaural maximum phoneme recognition scores (% correct) were analyzed in 30 patients in relation to the patient's age and level of hearing impairment characterized by a pure tone average (PTA(1-4 kHz)). The speech recognition score started to deteriorate from a score of 90% at 38 years at a rate of 0.4% per year. The 90% level was attained at 69 dB hearing level (PTA(1-4 kHz)); at higher levels of impairment, the score deteriorated at a slope of 0.6% per dB hearing level. There was no significant difference between group A and B in pure tone threshold, with or without presbyacusis correction, or phoneme recognition score as related to age or PTA(1-4 kHz). CONCLUSIONS: Patients with various mutations in have moderate to severe hearing impairment showing mild progression at approximately 0.5 dB hearing level per year.


Asunto(s)
Audiometría de Tonos Puros , Umbral Auditivo/fisiología , Proteínas de la Matriz Extracelular/genética , Tamización de Portadores Genéticos , Pérdida Auditiva Sensorineural/genética , Mutación/genética , Retinitis Pigmentosa/genética , Pruebas de Discriminación del Habla , Adolescente , Adulto , Mapeo Cromosómico , Estudios Transversales , Progresión de la Enfermedad , Femenino , Pérdida Auditiva Sensorineural/diagnóstico , Humanos , Modelos Lineales , Masculino , Persona de Mediana Edad , Fonética , Presbiacusia/diagnóstico , Presbiacusia/genética , Retinitis Pigmentosa/diagnóstico , Síndrome
18.
Genom Data ; 2: 375-7, 2014 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-26484133

RESUMEN

The pleiotropic, bioactive lipid lysophosphatidic acid [(LPA), 1-acyl-sn-glycerol-3-phosphate] exerts critical regulatory actions in physiology and pathophysiology in many systems. It is present in normal bodily fluids, and is elevated in pathology (1). In vivo, "LPA" exists as distinct molecular species, each having a single fatty acid of varying chain length and degree of unsaturation covalently attached to the glycerol backbone via an acyl, alkyl, or alkenyl link. These species differ in affinities for the individual LPA receptors [(LPARs), LPA1-6] and coupling to G proteins (2). However, LPA 18:1 has been and continues to be the most commonly utilized species in reported studies. The actions of "LPA" remain poorly defined in oral biology and pathophysiology. Our laboratory has addressed this knowledge gap by studying in vitro the actions of the major human salivary LPA species [18:1, 18:0, and 16:0 (3)] in human oral cells (4-7). This includes gingival fibroblasts (GF), which our flow cytometry data from multiple donors found that they express LPA1-5 (6). We have also reported that these species are ten-fold elevated to pharmacologic levels in the saliva and gingival crevicular fluid obtained from patients with moderate-severe periodontitis (8). As the potential of LPA to regulate transcriptional activity had not been examined in the oral system, this study used whole human genome microarray analysis to test the hypothesis that LPA 18:1-treated human GF would show significant changes in gene transcripts relevant to their biology, wound-healing, and inflammatory responses. LPA 18:1 was found to significantly regulate a large, complex set of genes critical to GF biology in these categories and to periodontal disease. The raw data has been deposited at NCBI's GEO database as record GSE57496.

19.
Genome Med ; 1(6): 59, 2009 Jun 08.
Artículo en Inglés | MEDLINE | ID: mdl-19519957

RESUMEN

The message is loud and clear. MicroRNA-96, one in a cluster of three related neurosensory microRNAs, is crucial to the development and maintenance of inner ear hair cells and hearing in mice and humans. Two recent studies show that mutations in the critical seed region of the microRNA underlie the cause of hair cell degeneration and progressive hearing loss. Other recent reports reveal the general requirement of microRNAs for sensory epithelial development and maintenance in Dicer knockout mouse ear. The challenge begins to determine whether microRNAs will resonate as therapeutic agents or target molecules to preserve or restore hearing.

20.
Am J Hum Genet ; 74(2): 357-66, 2004 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-14740321

RESUMEN

Usher syndrome type II (USH2) is a genetically heterogeneous autosomal recessive disorder with at least three genetic subtypes (USH2A, USH2B, and USH2C) and is classified phenotypically as congenital hearing loss and progressive retinitis pigmentosa. The VLGR1 (MASS1) gene in the 5q14.3-q21.1 USH2C locus was considered a likely candidate on the basis of its protein motif structure and expressed-sequence-tag representation from both cochlear and retinal subtracted libraries. Denaturing high-performance liquid chromatography and direct sequencing of polymerase-chain-reaction products amplified from 10 genetically independent patients with USH2C and 156 other patients with USH2 identified four isoform-specific VLGR1 mutations (Q2301X, I2906FS, M2931FS, and T6244X) from three families with USH2C, as well as two sporadic cases. All patients with VLGR1 mutations are female, a significant deviation from random expectations. The ligand(s) for the VLGR1 protein is unknown, but on the basis of its potential extracellular and intracellular protein-protein interaction domains and its wide mRNA expression profile, it is probable that VLGR1 serves diverse cellular and signaling processes. VLGR1 mutations have been previously identified in both humans and mice and are associated with a reflex-seizure phenotype in both species. The identification of additional VLGR1 mutations to test whether a phenotype/genotype correlation exists, akin to that shown for other Usher syndrome disease genes, is warranted.


Asunto(s)
Sordera/genética , Proteínas de Unión al GTP/metabolismo , Mutación , Receptores Acoplados a Proteínas G/genética , Transducción de Señal , Secuencia de Aminoácidos , Secuencia de Bases , Cromosomas Humanos Par 5 , Cartilla de ADN , Femenino , Humanos , Masculino , Linaje , Síndrome
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