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1.
Essays Biochem ; 68(2): 83-97, 2024 Oct 03.
Artículo en Inglés | MEDLINE | ID: mdl-38868916

RESUMEN

In this review, we examine the protein-protein interactions of cytosolic malate dehydrogenase (MDH), an under-studied area in cellular metabolism. We provide a comprehensive overview of MDH involvement in metabolism, especially its interactions with metabolic partners and dynamics of changing metabolism. We present an analysis of the biophysical nature of these interactions and the current methods used to study them. Our review includes an assessment of computational docking studies, which offer initial hypotheses about potential MDH interaction partners. Furthermore, we provide a summary of the sparse yet insightful experimental evidence available, establishing a foundation for future research. By integrating biophysical analysis and methodological advancements, this paper aims to illuminate the intricate network of interactions involving cytosolic MDH and their metabolic implications. This work not only contributes to our understanding of MDH's role in metabolism but also highlights the potential impact of these interactions in metabolic disorders.


Asunto(s)
Citosol , Malato Deshidrogenasa , Unión Proteica , Malato Deshidrogenasa/metabolismo , Citosol/metabolismo , Citosol/enzimología , Humanos , Animales , Simulación del Acoplamiento Molecular
2.
Comp Biochem Physiol B Biochem Mol Biol ; 140(3): 513-20, 2005 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-15694600

RESUMEN

L-fucose (fucose) is a monosaccharide normally present in mammals and is unique in being the only levorotatory sugar that can be synthesized and utilized by mammals. The metabolism of fucose is incompletely understood, but fucose can be synthesized de novo or salvaged. The utilization of fucose in the salvage pathway begins with phosphorylation by fucokinase. As part of an investigation of fucose metabolism in normal and disease states, we began an investigation of this enzyme. In this report, we present the tissue distribution of the enzyme in rat and mouse. The highest amount of activity was present in brain of both species. Some activity was found in all tissues examined (liver, kidney, heart, lung, spleen, brain, muscle, thymus, white adipose, testes, eye, aorta, small intestine, and submaxillary gland). Very low levels were found in small intestine. Varying levels in the tissues seems most likely to be the result of varying amounts of fucokinase protein as no difference in the Km values of crude enzyme could be shown. Protein-bound fucose levels were determined using the L-cysteine-phenol-sulfuric acid (CPS) assay. There is not a good correlation between fucokinase activity and protein-bound fucose, suggesting some tissues are more active in synthesis of fucose than others.


Asunto(s)
Encéfalo/enzimología , Fucosa/metabolismo , Fosfotransferasas (Aceptor de Grupo Alcohol)/análisis , Animales , Química Encefálica , Fucosa/análisis , Ratones , Ratas , Distribución Tisular
3.
Comp Biochem Physiol B Biochem Mol Biol ; 153(4): 359-64, 2009 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-19394435

RESUMEN

The oligosaccharide portion of glycoproteins is known to modulate protein structure, function, and turnover. Our laboratory is interested in the metabolism of L-fucose, a normal constituent of eukaryotic glycoproteins. L-fucose is unique in that it is the only levorotatory sugar utilized in mammalian systems. There is considerable interest in understanding the controls which determine the level of L-fucose attached to proteins, in order to generate stable and active glycoforms of protein for the treatment of disease. As part of a program to determine the controls on protein L-fucosylation, we have systematically determined the tissue distribution of the enzymes L-fucokinase and alpha-L-fucosidase in species across the vertebrate animal kingdom. In general, the level of alpha-L-fucosidase is higher than L-fucokinase level. The tissue with highest enzyme activity cannot be generalized, regardless of which enzyme is of interest. Furthermore, there is not a correlation between synthetic and catabolic enzyme activity within a tissue. L-fucokinase can be detected in all tissues examined. Interestingly, we have also detected ss-D-fucosidase activity, present in extraordinary levels in the liver and small intestine of snake. Whether this is due to a specific enzyme or whether it represents a broad specificity of the alpha-L-fucosidase is currently being investigated.


Asunto(s)
Glicoproteínas/metabolismo , Fosfotransferasas (Aceptor de Grupo Alcohol)/metabolismo , Vertebrados , alfa-L-Fucosidasa/metabolismo , Animales , Humanos , Distribución Tisular , Vertebrados/anatomía & histología , Vertebrados/metabolismo
4.
J Neurochem ; 101(2): 313-26, 2007 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-17217412

RESUMEN

The involvement of copper in the pathophysiology of neurodegeneration has been well documented but is not fully understood. Commonly, the effects are attributed to increased reactive oxygen species (ROS) production due to inherent redox properties of copper ions. Here we show copper can have physiological effects distinct from direct ROS production. First, we show that extragranular free copper inhibits the vesicular H(+)-ATPase of resealed chromaffin granule ghosts. Extragranular ascorbate potentiates this inhibition. The inhibition is mixed type with K(is) = 6.8 +/- 2.8 micromol/L and K(ii) = 3.8 +/- 0.6 micromol/L, with respect to ATP. Second, extracellular copper causes an inhibition of the generation of a pH-gradient and rapid dissipation of pre-generated pH and catecholamine gradients. Copper chelators and the ss-amyloid peptide 1-42 were found to effectively prevent the inhibition. The inhibition is reversible and time-independent suggesting the effects of extracellular copper on H(+)-ATPase is direct, and not due to ROS. The physiological significance of these observations was shown by the demonstration that extracellular copper causes a dramatic perturbation of dopamine metabolism in SH-SY5Y cells. Thus, we propose that the direct inhibition of the vesicular H(+)-ATPase may also contribute to the neurotoxic effects of copper.


Asunto(s)
Encéfalo/efectos de los fármacos , Cobre/toxicidad , Dopamina/metabolismo , Inhibidores Enzimáticos/toxicidad , Neuronas/efectos de los fármacos , ATPasas de Translocación de Protón/antagonistas & inhibidores , Animales , Encéfalo/metabolismo , Encéfalo/fisiopatología , Bovinos , Línea Celular Tumoral , Gránulos Cromafines/efectos de los fármacos , Gránulos Cromafines/metabolismo , Humanos , Concentración de Iones de Hidrógeno/efectos de los fármacos , Enfermedades Neurodegenerativas/inducido químicamente , Enfermedades Neurodegenerativas/metabolismo , Enfermedades Neurodegenerativas/fisiopatología , Neuronas/metabolismo , Neuronas/patología , Neurotoxinas/toxicidad , ATPasas de Translocación de Protón/metabolismo , Fracciones Subcelulares
5.
Protein Expr Purif ; 37(2): 288-93, 2004 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-15358349

RESUMEN

L-Fucose is a monosaccharide present in low levels in the serum. It is, however, a common structural component of glycoproteins. L-Fucose is accumulated in eukaryotic cells by a specific, facilitative diffusion transport system which has been designated the fucose transporter. In this study, purification of the transporter from mouse brain was performed by detergent extraction followed by ion-exchange and reactive dye ligand column chromatography. Purification was followed using a transport assay into reconstituted liposomes. A 111-fold purification with 5% yield was achieved from the crude homogenate. The apparent molecular weight of the protein was 57 kDa. Transport was found to be saturable. The K(m) and V(max) values are estimated at 3 microM and 275 pmol/min/mg, respectively. The tissue distribution of fucose transport was examined in liver, kidney, heart, lung, spleen, brain, muscle, adipose, ovary, pancreas, and thymus. Some fucose transport was found in all tissues examined. Very low levels were observed in the liver relative to all other tissues examined. The only monosaccharide which could inhibit the uptake of L-[5,6-(3)H]fucose was fucose itself.


Asunto(s)
Proteínas de Transporte de Monosacáridos/química , Proteínas de Transporte de Monosacáridos/aislamiento & purificación , Animales , Transporte Biológico , Encéfalo/embriología , Cromatografía , Cromatografía por Intercambio Iónico , Detergentes/farmacología , Relación Dosis-Respuesta a Droga , Electroforesis en Gel de Poliacrilamida , Fucosa/química , Glicoproteínas/química , Cinética , Ratones , Distribución Tisular
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