Homogenization and miniaturization of habitat structure in temperate marine forests.

Humans are rapidly transforming the structural configuration of the planet's ecosystems, but these changes and their ecological consequences remain poorly quantified in underwater habitats. Here, we show that the loss of forest-forming seaweeds and the rise of ground-covering 'turfs' across four continents consistently resulted in the miniaturization of underwater habitat structure, with seascapes converging towards flattened habitats with smaller habitable spaces. Globally, turf seascapes occupied a smaller architectural trait space and were structurally more similar across regions than marine forests, evidencing habitat homogenization. Surprisingly, such habitat convergence occurred despite turf seascapes consisting of vastly different species richness and with different taxa providing habitat architecture, as well as across disparate drivers of marine forest decline. Turf seascapes contained high sediment loads, with the miniaturization of habitat across 100s of km in mid-Western Australia resulting in reefs retaining an additional ~242 million tons of sediment (four orders of magnitude more than the sediments delivered fluvially annually). Together, this work demonstrates that the replacement of marine forests by turfs is a generalizable phenomenon that has profound consequences for the ecology of temperate reefs.

Farming behaviour of reef fishes increases the prevalence of coral disease associated microbes and black band disease.

Microbial community structure on coral reefs is strongly influenced by coral-algae interactions; however, the extent to which this influence is mediated by fishes is unknown. By excluding fleshy macroalgae, cultivating palatable filamentous algae and engaging in frequent aggression to protect resources, territorial damselfish (f. Pomacentridae), such as Stegastes, mediate macro-benthic dynamics on coral reefs and may significantly influence microbial communities. To elucidate how Stegastes apicalis and Stegastes nigricans may alter benthic microbial assemblages and coral health, we determined the benthic community composition (epilithic algal matrix and prokaryotes) and coral disease prevalence inside and outside of damselfish territories in the Great Barrier Reef, Australia. 16S rDNA sequencing revealed distinct bacterial communities associated with turf algae and a two to three times greater relative abundance of phylotypes with high sequence similarity to potential coral pathogens inside Stegastes's territories. These potentially pathogenic phylotypes (totalling 30.04% of the community) were found to have high sequence similarity to those amplified from black band disease (BBD) and disease affected corals worldwide. Disease surveys further revealed a significantly higher occurrence of BBD inside S. nigricans's territories. These findings demonstrate the first link between fish behaviour, reservoirs of potential coral disease pathogens and the prevalence of coral disease.

Algal turf structure and composition vary with particulate loads on coral reefs.

Algal turfs trap and retain particulates, however, little is known about the relationship between particulate accumulation and taxonomic composition of algal turfs. We investigated how particulate mass related to algal turf structure (length and density) and community composition (taxonomic and functional) on two disparate reefs. Particulate mass was positively related to algal turf length. By contrast, the relationship between particulate mass and turf density was more complex and followed a negative parabolic shape; density increased with particulate mass before stabilising and then declining. Community analyses showed taxonomic, but not functional group compositions differed significantly between reefs and with increasing particulate mass. Our results suggest high loads of particulates accumulated in algal turfs are related to a longer, lower density turf structure, typified by filamentous forms such as Cladophora. Changes in algal turf structure and composition could have a variety of bottom-up influences on coral reef ecosystems.

How to quantify algal turf sediments and particulates on tropical and temperate reefs: An overview.

Algal turfs are the most abundant benthic covering on reefs in many shallow-water marine ecosystems. The particulates and sediments bound within algal turfs can influence a multitude of functions within these ecosystems. Despite the global abundance and importance of algal turfs, comparison of algal turf-bound sediments is problematic due to a lack of standardisation across collection methods. Here we provide an overview of three methods (vacuum sampling, airlift sampling, and TurfPods), and the necessary equipment (including construction suggestions), commonly employed to quantify sediments from algal turfs. We review the purposes of these methods (e.g. quantification of standing stock versus net accumulation) and how methods can vary depending on the research question or monitoring protocol. By providing these details in a readily accessible format we hope to encourage a standardised set of approaches for marine benthic ecologists, geologists and managers, that facilitates further quantification and global comparisons of algal turf sediments.

Occurrence and accumulation of heavy metals in algal turf particulates and sediments on coral reefs.

Algal turfs form a critical interface on coral reefs that interacts with several key ecosystem processes. While we know these turfs have a remarkable propensity to accumulate sediments, which can have a range of ecosystem impacts, their role as sinks for heavy metals remains largely unexamined. Here we quantified the concentration of 15 metals in algal turf sediments from Lizard Island and Orpheus Island on the Great Barrier Reef, and specifically explored how the loads of arsenic, cobalt, iron and lead were related to turf length. Metal composition differed markedly between the two islands, with the composition at Orpheus Island suggesting closer links to terrestrial sediment sources. Furthermore, metal loads increased significantly with turf length, suggesting that longer turfs can accumulate these pollutants on reefs. Given that algal turfs are a crucial component of herbivorous/detritivorous trophic pathways, this could represent a key juncture at which these metals enter food chains.

Human-engineered hydrodynamic regimes as a driver of cryptic microinvertebrate assemblages on urban artificial shorelines.

Urban shorelines undergo substantial hydrodynamic changes as a result of coastal engineering and shoreline armouring that can alter sedimentation, turbidity, and other factors. These changes often coincide with major shifts in the composition and distribution of marine biota, however, rarely are hydrodynamic-mediated factors confirmed experimentally as the mechanism underpinning these shifts. This study first characterized hydrodynamic-related distribution patterns among epilithic and epiphytic microinvertebrates on urban seawalls in Singapore. We found reduced microinvertebrate abundances and distinct microinvertebrate community structure within benthic turf algae in areas where coastal defences had reduced wave energy and increased sediment deposition, among other hydrodynamic-related abiotic changes. Low-exposure areas also had reduced densities of macroinvertebrate grazers and less dense turf algae (lower mass per cm2) than adjacent high-exposure areas. Using harpacticoid copepods as a model taxon, we performed a reciprocal transplant experiment to discern between the effects of exposure-related conditions and grazing. Results from the experiment indicate that conditions associated with restricted wave energy from shoreline engineering limit harpacticoid population densities, as transplantation to low-exposure areas led to rapid reductions in abundance. At the same time, we found no effect from grazer exclusion cages, suggesting harpacticoids are minimally impacted by exposure-related gradients in gastropod macrograzer densities over short time scales. Given the key role of intertidal microinvertebrates, particularly harpacticoids, in nearshore food webs, we postulate that human-engineered hydrodynamic regimes are an important factor shaping marine ecosystem functioning in urban areas.

Sediments ratchet-down coral reef algal turf productivity.

Coral reefs are highly productive ecosystems, with much of this productivity arising from the algal turfs which cover the hard reef substratum. This productivity can flow up the food chain through herbivorous fishes, to be harvested by humans as fishable biomass. However, algal turfs exist on a spectrum of forms from short productive algal turfs (SPATs), to long sediment-laden algal turfs (LSATs). The latter are increasingly likely to typify Anthropocene coral reefs, however, we have a limited understanding of their nature and potential productivity. We assessed the nature of algal turfs in terms of length, biomass, relative detritus content, and productivity across a sediment load gradient, from SPATs to LSATs, at two reefs separated by >450 km along Australia's Great Barrier Reef (GBR). Furthermore, to assess the capacity of sediments to shape productivity, we modelled algal turf productivity, as a function of sediment load, across multiple spatial scales in a Bayesian framework. We recorded precipitous declines in both the productivity of algal turfs, and the relative nutritional value of particulates, up to sediment loads of ~100 g m-2. However, algal turf biomass did not change with sediment loads. This appears to reflect a shift in algal community composition from short, high-biomass, highly-productive algae at low sediment loads, to longer, low-biomass, less productive algae at high sediment loads. Importantly, these relationships provide a robust framework for estimating algal turf productivity on coral reefs. Indeed, when we applied our models to known sediment loads, we reveal that sediment loads alone can explain observed algal turf productivity gradients across multiple spatial scales. In an era of global climate change and coral reef reconfiguration, algal turf sediments may hold the key to maintaining benthic productivity on coral reefs in the Anthropocene.

Age, gut location and diet impact the gut microbiome of a tropical herbivorous surgeonfish.

Herbivorous fishes play important ecological roles in coral reefs by consuming algae that can otherwise outcompete corals, but we know little about the gut microbiota that facilitates this process. This study focussed on the gut microbiota of an ecologically important coral reef fish, the convict surgeonfish Acanthurus triostegus. We sought to understand how the microbiome of this species varies along its gastrointestinal tract and how it varies between juvenile and adult fish. Further, we examined if the bacteria associated with the diet consumed by juveniles contribute to the gut microbiota. 16S rRNA gene amplicon sequencing showed that bacterial communities associated with the midgut and hindgut regions were distinct between adults and juveniles; however, no significant differences were seen for gut wall samples. The microbiota associated with the epilithic algal food source was similar to that of the juvenile midgut and gut wall but differed from the microbiome of the hindgut. A core bacterial community including members of taxa Epulopiscium and Brevinemataceae was observed across all gastrointestinal and diet samples, suggesting that these bacterial symbionts can be acquired by juvenile convict surgeonfish horizontally via their diet and then are retained into adulthood.

Quantifying sediment dynamics on an inshore coral reef: Putting algal turfs in perspective.

Increased sediment loads within algal turfs, can be highly detrimental to coral reef systems. However, significant knowledge gaps remain in relation to sediment dynamics, especially linking suspended sediments, sedimentation and turf-bound sediments. To examine these links, a series of different methods for quantifying suspended sediments, sedimentation and the accumulation of turf sediments were compared, simultaneously, on an inner-shelf reef. We revealed that the amount and composition of sediment quantified using different methods varied markedly, with commonly employed measures of sedimentation failing to accurately reflect patterns of sediment accumulation in turfs. Our results highlighted the propensity for turfs to trap and retain sediments, with turfs accumulating approximately 2.6 times more sediment than traps, and 6 times more sediment than SedPods, over a seven-day period. This study highlights the major, but often overlooked, role that algal turfs can play in sediment dynamics on coral reefs.

Algal turf sediments on coral reefs: what's known and what's next.

Algal turfs are likely to rise in prominence on coral reefs in the Anthropocene. In these ecosystems the sediments bound within algal turfs will shape ecosystem functions and the services humanity can obtain from reefs. However, while interest is growing in the role of algal turf sediments, studies remain limited. In this review we provide an overview of our knowledge to-date concerning algal turf sediments on coral reefs. Specifically, we highlight what algal turf sediments are, their role in key ecosystem processes, the potential importance of algal turf sediments on Anthropocene reefs, and key knowledge gaps for future research. The evidence suggests that the management of algal turf sediments will be critically important if we are to sustain key functions and services on highly-altered, Anthropocene coral reef configurations.

Algal turf sediments across the Great Barrier Reef: Putting coastal reefs in perspective.

Sediments trapped within algal turfs play a key role in mediating ecosystem processes on reefs. Despite this ecological importance, our understanding of turf-bound sediments on coastal reefs is limited, even though such reefs are heavily exposed to terrestrial sediments. We compared algal turf sediment loads, composition and grain size distributions among coastal reefs along the Great Barrier Reef (GBR) and compared these to turf-bound sediments on reefs across the GBR. Algal turf sediment loads on coastal reefs were on average 9.4 times higher than offshore reefs (range 2.2-16.1 times). Among coastal reefs there was marked variability in the loads (797.87-3681.78 g m-2), composition (organics 1.0-8.9%; silicates 27.4-93.0%) and grain size of sediments. Our data highlight the potential variability in physical and ecological factors that control sediment dynamics on coastal reefs, including proximity to rivers, and reveal that turfs on coastal reefs are heavily influenced by sediments.

Fine sediments suppress detritivory on coral reefs.

Increasing sediment inputs are recognised as an important factor leading to coral reef degradation. However, the role of sediments in ecological processes is poorly understood. This study used paired-choice trials to quantify the effects of sediment grain size and chemical composition on feeding by the abundant detritivorous reef fish, Ctenochaetus striatus. The size of sediments from algal turfs were also compared to those ingested by reef-dwelling C. striatus. Algal turfs containing coarser sediments were preferred by C. striatus, while sediment composition (reefal carbonates vs. riverine silicates) had little effect. On the reef, C. striatus ingested finer sediments than those present in algal turfs. C. striatus appears to prefer algal turfs with coarser sediments as this facilitates ingestion of fine detrital particles, while finer sediments prevent selective feeding on detritus. These findings suggest that fine sediments from terrestrial runoff or dredging may be detrimental to feeding by detritivorous species.

Composition and temporal stability of turf sediments on inner-shelf coral reefs.

Elevated sediment loads within the epilithic algal matrix (EAM) of coral reefs can increase coral mortality and inhibit herbivory. Yet the composition, distribution and temporal variability of EAM sediment loads are poorly known, especially on inshore reefs. This study quantified EAM sediment loads (including organic particulates) and algal length across the reef profile of two bays at Orpheus Island (inner-shelf Great Barrier Reef) over a six month period. We examined the total sediment mass, organic load, carbonate and silicate content, and the particle sizes of EAM sediments. Throughout the study period, all EAM sediment variables exhibited marked variation among reef zones. However, EAM sediment loads and algal length were consistent between bays and over time, despite major seasonal variation in climate including a severe tropical cyclone. This study provides a comprehensive description of EAM sediments on inshore reefs and highlights the exceptional temporal stability of EAM sediments on coral reefs.