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1.
Nature ; 629(8010): 127-135, 2024 May.
Artículo en Inglés | MEDLINE | ID: mdl-38658750

RESUMEN

Phenotypic variation among species is a product of evolutionary changes to developmental programs1,2. However, how these changes generate novel morphological traits remains largely unclear. Here we studied the genomic and developmental basis of the mammalian gliding membrane, or patagium-an adaptative trait that has repeatedly evolved in different lineages, including in closely related marsupial species. Through comparative genomic analysis of 15 marsupial genomes, both from gliding and non-gliding species, we find that the Emx2 locus experienced lineage-specific patterns of accelerated cis-regulatory evolution in gliding species. By combining epigenomics, transcriptomics and in-pouch marsupial transgenics, we show that Emx2 is a critical upstream regulator of patagium development. Moreover, we identify different cis-regulatory elements that may be responsible for driving increased Emx2 expression levels in gliding species. Lastly, using mouse functional experiments, we find evidence that Emx2 expression patterns in gliders may have been modified from a pre-existing program found in all mammals. Together, our results suggest that patagia repeatedly originated through a process of convergent genomic evolution, whereby regulation of Emx2 was altered by distinct cis-regulatory elements in independently evolved species. Thus, different regulatory elements targeting the same key developmental gene may constitute an effective strategy by which natural selection has harnessed regulatory evolution in marsupial genomes to generate phenotypic novelty.


Asunto(s)
Evolución Molecular , Proteínas de Homeodominio , Locomoción , Marsupiales , Factores de Transcripción , Animales , Femenino , Masculino , Ratones , Epigenómica , Perfilación de la Expresión Génica , Regulación del Desarrollo de la Expresión Génica , Genoma/genética , Genómica , Proteínas de Homeodominio/genética , Proteínas de Homeodominio/metabolismo , Locomoción/genética , Marsupiales/anatomía & histología , Marsupiales/clasificación , Marsupiales/genética , Marsupiales/crecimiento & desarrollo , Filogenia , Secuencias Reguladoras de Ácidos Nucleicos/genética , Factores de Transcripción/metabolismo , Factores de Transcripción/genética , Fenotipo , Humanos
2.
Development ; 149(3)2022 02 01.
Artículo en Inglés | MEDLINE | ID: mdl-35005774

RESUMEN

Only mammals evolved a neocortex, which integrates sensory-motor and cognitive functions. Significant diversifications in the cellular composition and connectivity of the neocortex occurred between the two main therian groups: marsupials and eutherians. However, the developmental mechanisms underlying these diversifications are largely unknown. Here, we compared the neocortical transcriptomes of Sminthopsis crassicaudata, a mouse-sized marsupial, with those of eutherian mice at two developmentally equivalent time points corresponding to deeper and upper layer neuron generation. Enrichment analyses revealed more mature gene networks in marsupials at the early stage, which reverted at the later stage, suggesting a more precocious but protracted neuronal maturation program relative to birth timing of cortical layers. We ranked genes expressed in different species and identified important differences in gene expression rankings between species. For example, genes known to be enriched in upper-layer cortical projection neuron subtypes, such as Cux1, Lhx2 and Satb2, likely relate to corpus callosum emergence in eutherians. These results show molecular heterochronies of neocortical development in Theria, and highlight changes in gene expression and cell type composition that may underlie neocortical evolution and diversification. This article has an associated 'The people behind the papers' interview.


Asunto(s)
Evolución Biológica , Euterios/crecimiento & desarrollo , Marsupiales/crecimiento & desarrollo , Neocórtex/crecimiento & desarrollo , Transcriptoma , Animales , Euterios/clasificación , Euterios/genética , Marsupiales/clasificación , Marsupiales/genética , Ratones , Neocórtex/metabolismo , Filogenia , Factores de Transcripción/genética , Factores de Transcripción/metabolismo
3.
Nature ; 558(7710): 390-395, 2018 06.
Artículo en Inglés | MEDLINE | ID: mdl-29899454

RESUMEN

Molecular estimates of the divergence of placental and marsupial mammals and their broader clades (Eutheria and Metatheria, respectively) fall primarily in the Jurassic period. Supporting these estimates, Juramaia-the oldest purported eutherian-is from the early Late Jurassic (160 million years ago) of northeastern China. Sinodelphys-the oldest purported metatherian-is from the same geographic area but is 35 million years younger, from the Jehol biota. Here we report a new Jehol eutherian, Ambolestes zhoui, with a nearly complete skeleton that preserves anatomical details that are unknown from contemporaneous mammals, including the ectotympanic and hyoid apparatus. This new fossil demonstrates that Sinodelphys is a eutherian, and that postcranial differences between Sinodelphys and the Jehol eutherian Eomaia-previously thought to indicate separate invasions of a scansorial niche by eutherians and metatherians-are instead variations among the early members of the placental lineage. The oldest known metatherians are now not from eastern Asia but are 110 million years old from western North America, which produces a 50-million-year ghost lineage for Metatheria.


Asunto(s)
Euterios/clasificación , Marsupiales/clasificación , Filogenia , Animales , China , Euterios/anatomía & histología , Fósiles , Marsupiales/anatomía & histología
4.
Syst Biol ; 67(3): 400-412, 2018 May 01.
Artículo en Inglés | MEDLINE | ID: mdl-29029231

RESUMEN

A fundamental challenge in resolving evolutionary relationships across the tree of life is to account for heterogeneity in the evolutionary signal across loci. Studies of marsupial mammals have demonstrated that this heterogeneity can be substantial, leaving considerable uncertainty in the evolutionary timescale and relationships within the group. Using simulations and a new phylogenomic data set comprising nucleotide sequences of 1550 loci from 18 of the 22 extant marsupial families, we demonstrate the power of a method for identifying clusters of loci that support different phylogenetic trees. We find two distinct clusters of loci, each providing an estimate of the species tree that matches previously proposed resolutions of the marsupial phylogeny. We also identify a well-supported placement for the enigmatic marsupial moles (Notoryctes) that contradicts previous molecular estimates but is consistent with morphological evidence. The pattern of gene-tree variation across tree-space is characterized by changes in information content, GC content, substitution-model adequacy, and signatures of purifying selection in the data. In a simulation study, we show that incomplete lineage sorting can explain the division of loci into the two tree-topology clusters, as found in our phylogenomic analysis of marsupials. We also demonstrate the potential benefits of minimizing uncertainty from phylogenetic conflict for molecular dating. Our analyses reveal that Australasian marsupials appeared in the early Paleocene, whereas the diversification of present-day families occurred primarily during the late Eocene and early Oligocene. Our methods provide an intuitive framework for improving the accuracy and precision of phylogenetic inference and molecular dating using genome-scale data.


Asunto(s)
Genómica , Marsupiales/clasificación , Modelos Genéticos , Filogenia , Animales , Simulación por Computador , Marsupiales/genética
5.
An Acad Bras Cienc ; 91Suppl 2(Suppl 2): e20180440, 2019.
Artículo en Inglés | MEDLINE | ID: mdl-30365721

RESUMEN

The Protodidelphidae was a group of marsupials that lived in Gondwana from the early to middle Eocene. Among South American faunas, the Itaboraí Basin calls attention by the presence of four genera and six species. Herein is described Bergqvistherium primigenia gen. et sp. nov., a new protodidelphid from the Itaboraí Basin - lower Eocene. This taxon differs from other protodidelphids in the smaller size, developed entocristid, less brachyo-bunoid adaptations, and entoconid more mesial than the hypoconid. These characters are recovered as plesiomorphies of the Protodidelphidae, supporting Bergqvistherium as an early-divergent lineage of this group. The Protodidelphidae fauna of the Itaboraí Basin is represented by less specialized "basal" taxa, such as Bergqvistherium and Periprotodidelphis; and more specialized apical taxa, such as Guggenheimia, Protodidelphis, and Carolocoutoia. This result indicates that the diversification of apical protodidelphids probably was a result of a relatively short-time event, occurring during the early Eocene. This evolutionary event can be directly correlated to the increase in the temperatures and the extension of tropical forests resulted by the Paleocene-Eocene Thermal Maximum during the Itaboraiense time span. The study supported a Late Cretaceous origin for the Protodidelphidae, which agrees with molecular studies for the Didelphimorphia.


Asunto(s)
Evolución Biológica , Fósiles , Marsupiales/anatomía & histología , Animales , Brasil , Marsupiales/clasificación , Filogenia
6.
Proc Natl Acad Sci U S A ; 112(5): E487-96, 2015 Feb 03.
Artículo en Inglés | MEDLINE | ID: mdl-25605903

RESUMEN

Syncytins are genes of retroviral origin captured by eutherian mammals, with a role in placentation. Here we show that some marsupials-which are the closest living relatives to eutherian mammals, although they diverged from the latter ∼190 Mya-also possess a syncytin gene. The gene identified in the South American marsupial opossum and dubbed syncytin-Opo1 has all of the characteristic features of a bona fide syncytin gene: It is fusogenic in an ex vivo cell-cell fusion assay; it is specifically expressed in the short-lived placenta at the level of the syncytial feto-maternal interface; and it is conserved in a functional state in a series of Monodelphis species. We further identify a nonfusogenic retroviral envelope gene that has been conserved for >80 My of evolution among all marsupials (including the opossum and the Australian tammar wallaby), with evidence for purifying selection and conservation of a canonical immunosuppressive domain, but with only limited expression in the placenta. This unusual captured gene, together with a third class of envelope genes from recently endogenized retroviruses-displaying strong expression in the uterine glands where retroviral particles can be detected-plausibly correspond to the different evolutionary statuses of a captured retroviral envelope gene, with only syncytin-Opo1 being the present-day bona fide syncytin active in the opossum and related species. This study would accordingly recapitulate the natural history of syncytin exaptation and evolution in a single species, and definitely extends the presence of such genes to all major placental mammalian clades.


Asunto(s)
Productos del Gen env/genética , Marsupiales/genética , Placenta/fisiología , Proteínas Gestacionales/genética , Retroviridae/fisiología , Proteínas del Envoltorio Viral/genética , Animales , Femenino , Perfilación de la Expresión Génica , Genes env , Hibridación in Situ , Marsupiales/clasificación , Datos de Secuencia Molecular , Filogenia , Embarazo , Transcripción Genética
7.
BMC Evol Biol ; 17(1): 240, 2017 12 04.
Artículo en Inglés | MEDLINE | ID: mdl-29202687

RESUMEN

BACKGROUND: The order Dasyuromorphia is a diverse radiation of faunivorous marsupials, comprising >80 modern species in Australia and New Guinea. It includes dasyurids, the numbat (the myrmecobiid Myrmecobius fasciatus) and the recently extinct thylacine (the thylacinid Thylacinus cyncocephalus). There is also a diverse fossil record of dasyuromorphians and "dasyuromorphian-like" taxa known from Australia. We present the first total evidence phylogenetic analyses of the order, based on combined morphological and molecular data (including a novel set of 115 postcranial characters), to resolve relationships and calculate divergence dates. We use this information to analyse the diversification dynamics of modern dasyuromorphians. RESULTS: Our morphology-only analyses are poorly resolved, but our molecular and total evidence analyses confidently resolve most relationships within the order, and are strongly congruent with recent molecular studies. Thylacinidae is the first family to diverge within the order, and there is strong support for four tribes within Dasyuridae (Dasyurini, Phascogalini, Planigalini and Sminthopsini). Among fossil taxa, Ankotarinja and Keeuna do not appear to be members of Dasyuromorphia, whilst Barinya and Mutpuracinus are of uncertain relationships within the order. Divergence dates calculated using total evidence tip-and-node dating are younger than both molecular node-dating and total evidence tip-dating, but appear more congruent with the fossil record and are relatively insensitive to calibration strategy. The tip-and-node divergence dates indicate that Dasyurini, Phascogalini and Sminthopsini began to radiate almost simultaneously during the middle-to-late Miocene (11.5-13.1 MYA; composite 95% HPD: 9.5-15.9 MYA); the median estimates for these divergences are shortly after a drop in global temperatures (the middle Miocene Climatic Transition), and coincide with a faunal turnover event in the mammalian fossil record of Australia. Planigalini radiated much later, during the latest Miocene to earliest Pliocene (6.5 MYA; composite 95% HPD: 4.4-8.9 MYA); the median estimates for these divergences coincide with an increase in grass pollen in the Australian palynological record that suggests the development of more open habitats, which are preferred by modern planigale species. CONCLUSIONS: Our results provide a phylogenetic and temporal framework for interpreting the evolution of modern and fossil dasyuromorphians, but future progress will require a much improved fossil record.


Asunto(s)
Conducta Alimentaria , Marsupiales/clasificación , Filogenia , Animales , Australia , Teorema de Bayes , Temperatura , Factores de Tiempo
8.
BMC Evol Biol ; 17(1): 110, 2017 05 04.
Artículo en Inglés | MEDLINE | ID: mdl-28472940

RESUMEN

BACKGROUND: Runt-related transcription factor 2 (RUNX2) is a transcription factor essential for skeletal development. Variation within the RUNX2 polyglutamine / polyalanine (QA) repeat is correlated with facial length within orders of placental mammals and is suggested to be a major driver of craniofacial diversity. However, it is not known if this correlation exists outside of the placental mammals. RESULTS: Here we examined the correlation between the RUNX2 QA repeat ratio and facial length in the naturally evolving sister group to the placental mammals, the marsupials. Marsupials have a diverse range of facial lengths similar to that seen in placental mammals. Despite their diversity there was almost no variation seen in the RUNX2 QA repeat across individuals spanning the entire marsupial infraclass. The extreme conservation of the marsupial RUNX2 QA repeat indicates it is under strong purifying selection. Despite this, we observed an unexpectedly high level of repeat purity. CONCLUSIONS: Unlike within orders of placental mammals, RUNX2 repeat variation cannot drive craniofacial diversity in marsupials. We propose conservation of the marsupial RUNX2 QA repeat is driven by the constraint of accelerated ossification of the anterior skeleton to facilitate life in the pouch. Thus, marsupials must utilize alternate pathways to placental mammals to drive craniofacial evolution.


Asunto(s)
Subunidad alfa 1 del Factor de Unión al Sitio Principal/genética , Marsupiales/anatomía & histología , Marsupiales/genética , Cráneo/anatomía & histología , Animales , Evolución Biológica , Mamíferos/anatomía & histología , Mamíferos/clasificación , Mamíferos/genética , Marsupiales/clasificación , Osteogénesis , Secuencias Repetitivas de Ácidos Nucleicos
9.
Evol Dev ; 19(2): 69-84, 2017 03.
Artículo en Inglés | MEDLINE | ID: mdl-28224708

RESUMEN

Marsupials display far less forelimb diversity than placentals, possibly because of the laborious forelimb-powered climb to the pouch performed by most marsupial neonates. This is thought to result in stronger morphological integration (i.e., higher co-variance) within the marsupial forelimb skeleton, and lower integration between marsupial fore- and hind limbs, compared to other mammals. Possible mechanisms for this constraint are a fundamental developmental change in marsupial limb patterning, or alternatively more immediate perinatal biomechanical and metabolic requirements. In the latter case, peramelid marsupials (bandicoots), which have neonates that climb very little, should show lower within-limb and higher between-limb integration, compared to other marsupials. We tested this in four peramelid species and the related bilby, using partial correlation analyses of between-landmark linear measurements of limb bones, and Procrustes-based two-block partial least-squares analysis (2B-PLS) of limb bone shapes using the same landmarks. We find extensive between-limb integration in partial correlation analyses of only bone lengths, consistent with a reduction of a short-term biomechanical/allocation constraint in peramelid forelimbs. However, partial correlations of bone proportions and 2B-PLS reveal extensive shape divergence between correlated bone pairs. This result contradicts expectations of developmental constraints or serial homology, instead suggesting a function-driven integration pattern. Comparing visualizations from cross-species principal components analysis and 2B-PLS, we tentatively identify selection for digging and half-bounding as the main driver of bandicoot limb integration patterning. This calls for further assessments of functional versus developmental limb integration in marsupials with a more strenuous neonatal climb to the pouch.


Asunto(s)
Miembro Anterior/anatomía & histología , Marsupiales/anatomía & histología , Marsupiales/genética , Animales , Huesos/anatomía & histología , Miembro Anterior/fisiología , Mamíferos/anatomía & histología , Mamíferos/clasificación , Mamíferos/genética , Mamíferos/fisiología , Marsupiales/clasificación , Marsupiales/fisiología , Análisis de Componente Principal
10.
Syst Biol ; 65(4): 651-61, 2016 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-26865274

RESUMEN

Our understanding of phenotypic evolution over macroevolutionary timescales largely relies on the use of stochastic models for the evolution of continuous traits over phylogenies. The two most widely used models, Brownian motion and the Ornstein-Uhlenbeck (OU) process, differ in that the latter includes constraints on the variance that a trait can attain in a clade. The OU model explicitly models adaptive evolution toward a trait optimum and has thus been widely used to demonstrate the existence of stabilizing selection on a trait. Here we introduce a new model for the evolution of continuous characters on phylogenies: Brownian motion between two reflective bounds, or Bounded Brownian Motion (BBM). This process also models evolutionary constraints, but of a very different kind. We provide analytical expressions for the likelihood of BBM and present a method to calculate the likelihood numerically, as well as the associated R code. Numerical simulations show that BBM achieves good performance: parameter estimation is generally accurate but more importantly BBM can be very easily discriminated from both BM and OU. We then analyze climatic niche evolution in diprotodonts and find that BBM best fits this empirical data set, suggesting that the climatic niches of diprotodonts are bounded by the climate available in Australia and the neighboring islands but probably evolved with little additional constraints. We conclude that BBM is a valuable addition to the macroevolutionary toolbox, which should enable researchers to elucidate whether the phenotypic traits they study are evolving under hard constraints between bounds.


Asunto(s)
Evolución Biológica , Modelos Biológicos , Fenotipo , Filogenia , Animales , Australia , Marsupiales/clasificación
11.
Nature ; 474(7349): 83-6, 2011 Jun 02.
Artículo en Inglés | MEDLINE | ID: mdl-21552278

RESUMEN

The vast majority of Mesozoic and early Cenozoic metatherian mammals (extinct relatives of modern marsupials) are known only from partial jaws or isolated teeth, which give insight into their probable diets and phylogenetic relationships but little else. The few skulls known are generally crushed, incomplete or both, and associated postcranial material is extremely rare. Here we report the discovery of an exceptionally large number of almost undistorted, nearly complete skulls and skeletons of a stem-metatherian, Pucadelphys andinus, in the early Palaeocene epoch of Tiupampa in Bolivia. These give an unprecedented glimpse into early metatherian morphology, evolutionary relationships and, especially, ecology. The remains of 35 individuals have been collected, with 22 of these represented by nearly complete skulls and associated postcrania. These individuals were probably buried in a single catastrophic event, and so almost certainly belong to the same population. The preservation of multiple adult, sub-adult and juvenile individuals in close proximity (<1 m(2)) is indicative of gregarious social behaviour or at least a high degree of social tolerance and frequent interaction. Such behaviour is unknown in living didelphids, which are highly solitary and have been regarded, perhaps wrongly, as the most generalized living marsupials. The Tiupampan P. andinus population also exhibits strong sexual dimorphism, which, in combination with gregariousness, suggests strong male-male competition and polygyny. Our study shows that social interactions occurred in metatherians as early as the basal Palaeocene and that solitary behaviour may not be plesiomorphic for Metatheria as a whole.


Asunto(s)
Fósiles , Marsupiales/clasificación , Conducta Social , Animales , Bolivia , Femenino , Masculino , Marsupiales/anatomía & histología , Caracteres Sexuales
12.
Nature ; 476(7361): 442-5, 2011 Aug 24.
Artículo en Inglés | MEDLINE | ID: mdl-21866158

RESUMEN

Placentals are the most abundant mammals that have diversified into every niche for vertebrates and dominated the world's terrestrial biotas in the Cenozoic. A critical event in mammalian history is the divergence of eutherians, the clade inclusive of all living placentals, from the metatherian-marsupial clade. Here we report the discovery of a new eutherian of 160 Myr from the Jurassic of China, which extends the first appearance of the eutherian-placental clade by about 35 Myr from the previous record, reducing and resolving a discrepancy between the previous fossil record and the molecular estimate for the placental-marsupial divergence. This mammal has scansorial forelimb features, and provides the ancestral condition for dental and other anatomical features of eutherians.


Asunto(s)
Fósiles , Mamíferos/anatomía & histología , Mamíferos/clasificación , Marsupiales/anatomía & histología , Marsupiales/clasificación , Filogenia , Placenta/fisiología , Animales , China , Femenino , Historia Antigua , Mamíferos/embriología , Mamíferos/fisiología , Mandíbula/anatomía & histología , Marsupiales/fisiología , Diente Molar/anatomía & histología , Embarazo , Factores de Tiempo
13.
Naturwissenschaften ; 103(1-2): 6, 2016 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-26743194

RESUMEN

With less than 3 g of estimated body mass, the early Eocene Minusculodelphis minimus Paula Couto (Mammalia, Metatheria, Jaskhadelphyidae) is one of the smallest mammals, living or extinct. It has alternatively been regarded as a didelphid or a derorhynchid "ameridelphian," or even as an eometatherian marsupial. Here, we describe a new species of Minusculodelphis coming from the same locality (Itaboraí Quarry, Brazil) and age (Itaboraian age) of the type species of the genus. It differs from M. minimus in its larger size and several dental characters. The new species offers data on the upper dentition and femur, which are unknown in the type species. Compared to other Paleogene metatherians, Minusculodelphis shows closer relationships with Jaskhadelphys, from the early Paleocene of Tiupampa, Bolivia, as well as with Kiruwamaq, from the late Eocene-early Oligocene of Perú. A cladistic analysis places all three genera within the family Jaskhadelphyidae (Metatheria, Order indet.), which includes small to tiny, insectivorous-like metatherians. We argue that insectivory (soft insects) is the best-supported diet for both species of Minusculodelphis, and that the most probable microhabitat for them was the understorey or leaf litter of tropical, rain forested environments.


Asunto(s)
Fósiles , Marsupiales/anatomía & histología , Marsupiales/clasificación , Filogenia , Animales , Dieta , Ecosistema , Fémur/anatomía & histología , Marsupiales/fisiología , América del Sur , Especificidad de la Especie , Diente/anatomía & histología
14.
Mol Biol Evol ; 31(9): 2322-30, 2014 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-24881050

RESUMEN

Marsupials exhibit great diversity in ecology and morphology. However, compared with their sister group, the placental mammals, our understanding of many aspects of marsupial evolution remains limited. We use 101 mitochondrial genomes and data from 26 nuclear loci to reconstruct a dated phylogeny including 97% of extant genera and 58% of modern marsupial species. This tree allows us to analyze the evolution of habitat preference and geographic distributions of marsupial species through time. We found a pattern of mesic-adapted lineages evolving to use more arid and open habitats, which is broadly consistent with regional climate and environmental change. However, contrary to the general trend, several lineages subsequently appear to have reverted from drier to more mesic habitats. Biogeographic reconstructions suggest that current views on the connectivity between Australia and New Guinea/Wallacea during the Miocene and Pliocene need to be revised. The antiquity of several endemic New Guinean clades strongly suggests a substantially older period of connection stretching back to the Middle Miocene and implies that New Guinea was colonized by multiple clades almost immediately after its principal formation.


Asunto(s)
Evolución Biológica , Biología Computacional/métodos , Ecosistema , Marsupiales/genética , Adaptación Biológica , Animales , ADN Mitocondrial/análisis , Evolución Molecular , Marsupiales/clasificación , Filogenia , Filogeografía , Análisis de Secuencia de ADN
15.
Immunogenetics ; 67(3): 195-201, 2015 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-25563844

RESUMEN

The Tasmanian devil is an endangered marsupial species that has survived several historical bottlenecks and now has low genetic diversity. Here we characterize the Toll-like receptor (TLR) genes and their diversity in the Tasmanian devil. TLRs are a key innate immune gene family found in all animals. Ten TLR genes were identified in the Tasmanian devil genome. Unusually low levels of diversity were found in 25 devils from across Tasmania. We found two alleles at TLR2, TLR3 and TLR6. The other seven genes were monomorphic. The insurance population, which safeguards the species from extinction, has successfully managed to capture all of these TLR alleles, but concerns remain for the long-term survival of this species.


Asunto(s)
Alelos , Genoma , Marsupiales/genética , Receptores Toll-Like/genética , Animales , Bovinos , Conservación de los Recursos Naturales , Especies en Peligro de Extinción , Frecuencia de los Genes , Variación Genética , Humanos , Marsupiales/clasificación , Marsupiales/inmunología , Ratones , Filogenia , Tasmania , Receptores Toll-Like/inmunología
16.
Mol Biol Evol ; 30(5): 1041-5, 2013 May.
Artículo en Inglés | MEDLINE | ID: mdl-23429857

RESUMEN

The Australian numbat, Myrmecobius fasciatus, is the only marsupial that feeds almost exclusively on termites and that has a life following the diurnally restricted and dynamic geographical distribution of termites. The millions of years of this adaptation led to unique morphological and anatomical features, especially basicranial and dental characteristics, that make it difficult to identify a clear phylogenetic affiliation to other marsupials. From DNA sequence analyses, the family Myrmecobiidae is placed within the dasyuromorph marsupials, but the exact position varies from study to study, and support values are mostly rather modest. Here, we report the recovery and analysis of approximately 110,000 quasifossilized traces of mobile element insertions into the genome of a dasyurid marsupial (Tasmanian devil), 25 of which are phylogenetically informative for early dasyuromorphial evolution. Fourteen of these ancient retroposon insertions are shared by the 16 Dasyuromorphia species analyzed, including the numbat, but are absent in the outgroups. An additional 11 other insertions are present in all Dasyuridae but are absent in the numbat. These findings place numbats as the sister group to all living Dasyuridae and show that the investigated Dasyuromorphia, including the Myrmecobiidae, constitutes a monophyletic group that is separated from Peramelemorphia, Notoryctemorphia, and other marsupials.


Asunto(s)
Isópteros , Marsupiales/genética , Animales , Australia , Evolución Biológica , Marsupiales/clasificación , Datos de Secuencia Molecular , Filogenia , Retroelementos/genética
17.
Zoolog Sci ; 31(9): 608-12, 2014 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-25186933

RESUMEN

A vigorous discussion surrounds the question as to what enables some mammals--including primates and cetaceans--to evolve large brains. We recently published a study suggesting that the radiation of marsupial mammals is highly relevant to this question because of the unique reproductive and metabolic traits within this clade. In particular, we controversially suggested that marsupial brain sizes are not systematically smaller than those of placentals, and that elevated basal metabolic rates (BMR) are not linked to larger marsupial brains. As our dataset was found to contain some erroneous body size data, derived from a published source, we here use an updated and corrected dataset and employ standard as well as phylogenetically corrected analyses to re-assess and elaborate on our original conclusions. Our proposal that marsupials are not systematically smaller-brained than placentals remains supported, particularly when the unusually large-brained placental clade, Primates, is excluded. Use of the new dataset not only confirms that high metabolic rates are not associated with larger brain size in marsupials, but we additionally find some support for a striking negative correlation between BMR and brain size. The best supported correlates of large brain size remain the reproductive traits of weaning age and litter size. These results support our suggestion that mammalian brain sizes (including, by inference, those of monotremes) are predominantly constrained by the ability of females to fuel the growth of their offspring's large brains, rather than by the maintenance requirements of the adult brain.


Asunto(s)
Encéfalo/anatomía & histología , Mamíferos , Tamaño de los Órganos , Filogenia , Animales , Encéfalo/crecimiento & desarrollo , Encéfalo/metabolismo , Femenino , Mamíferos/anatomía & histología , Mamíferos/clasificación , Mamíferos/metabolismo , Marsupiales/anatomía & histología , Marsupiales/clasificación , Marsupiales/metabolismo , Placenta/metabolismo , Embarazo
18.
Zoo Biol ; 33(3): 157-65, 2014.
Artículo en Inglés | MEDLINE | ID: mdl-24711266

RESUMEN

The kultarr (Antechinomys laniger) is a small marsupial that inhabits arid and semi-arid areas of central Australia. The kultarr is the only species within its genus and is morphologically unique from other dasyurids. Like many Australian marsupials, the kultarr has undergone significant population declines and although it is listed as "least concern" on the IUCN red list little is known of their ecology in the wild. A lack of knowledge on their biology can be attributed to their cryptic nature and sparse population densities. Recent studies of kultarrs have increased knowledge of the biology and captive management, with current data predominately coming from captive colonies. Captive studies of the kultarr have provided data on reproduction, diet choice, nutrition, health, and disease. Kultarrs are polyestrous seasonal breeders and are believed to be mostly insectivorous. Diseases noted in captive individuals provide some insight into those that may influence animals in the wild. Further research is required on both wild and captive populations to increase the knowledge base and determine appropriate management techniques for both wild and captive populations.


Asunto(s)
Crianza de Animales Domésticos , Animales de Zoológico/fisiología , Marsupiales/fisiología , Animales , Conservación de los Recursos Naturales , Dieta/veterinaria , Ecosistema , Marsupiales/anatomía & histología , Marsupiales/clasificación , Reproducción
19.
Zootaxa ; 3765: 101-33, 2014 Feb 17.
Artículo en Inglés | MEDLINE | ID: mdl-24870890

RESUMEN

We describe a new species of dasyurid marsupial within the genus Antechinus that was previously known as a northern outlier of Dusky Antechinus (A. swainsonii). The Black-tailed Antechinus, Antechinus arktos sp. nov., is known only from areas of high altitude and high rainfall on the Tweed Volcano caldera of far south-east Queensland and north-east New South Wales, Australia. Antechinus arktos formerly sheltered under the taxonomic umbrella of A. swainsonii mimetes, the widespread mainland form of Dusky Antechinus. With the benefit of genetic hindsight, some striking morphological differences are herein resolved: A. s. mimetes is more uniformly deep brown-black to grizzled grey-brown from head to rump, with brownish (clove brown-raw umber) hair on the upper surface of the hindfoot and tail, whereas A. arktos is more vibrantly coloured, with a marked change from greyish-brown head to orange-brown rump, fuscous black on the upper surface of the hindfoot and dense, short fur on the evenly black tail. Further, A. arktos has marked orange-brown fur on the upper and lower eyelid, cheek and in front of the ear and very long guard hairs all over the body; these characters are more subtle in A. s. mimetes. There are striking genetic differences between the two species: at mtDNA, A. s. mimetes from north-east New South Wales is 10% divergent to A. arktos from its type locality at Springbrook NP, Queensland. In contrast, the Ebor A. s. mimetes clades closely with conspecifics from ACT and Victoria. A. arktos skulls are strikingly different to all subspecies of A. swainsonii. A. arktos are markedly larger than A. s. mimetes and A. s. swainsonii (Tasmania) for a range of craniodental measures. Antechinus arktos were historically found at a few proximate mountainous sites in south-east Queensland, and have only recently been recorded from or near the type locality. Even there, the species is likely in low abundance. The Black-tailed Antechinus has plausibly been detrimentally affected by climate change in recent decades, and will be at further risk with increasing warming trends. 


Asunto(s)
Marsupiales/anatomía & histología , Marsupiales/clasificación , Animales , Australia , Demografía , Ecosistema , Femenino , Masculino , Marsupiales/genética , Marsupiales/fisiología , Filogenia , Especificidad de la Especie
20.
BMC Genomics ; 14: 134, 2013 Feb 27.
Artículo en Inglés | MEDLINE | ID: mdl-23445260

RESUMEN

BACKGROUND: There is growing recognition that horizontal DNA transfer, a process known to be common in prokaryotes, is also a significant source of genomic variation in eukaryotes. Horizontal transfer of transposable elements (HTT) may be especially prevalent in eukaryotes given the inherent mobility, widespread occurrence, and prolific abundance of these elements in many eukaryotic genomes. RESULTS: Here, we provide evidence for a new case of HTT of the transposon family OposCharlie1 (OC1) in the Tasmanian devil, Sarcophilus harrisii. Bioinformatic analyses of OC1 sequences in the Tasmanian devil genome suggest that this transposon infiltrated the common ancestor of the Dasyuridae family ~17 million years ago. This estimate is corroborated by a PCR-based screen for the presence/absence of this family in Tasmanian devils and closely-related species. CONCLUSIONS: This case of HTT is the first to be reported in dasyurids. It brings the number of animal lineages independently invaded by OC1 to 12, and adds a fourth continent to the pandemic-like pattern of invasion of this transposon. In the context of these data, we discuss the evolutionary history of this transposon family and its potential impact on the diversification of marsupials.


Asunto(s)
Elementos Transponibles de ADN/genética , Transferencia de Gen Horizontal , Marsupiales/genética , Animales , Biología Computacional , Genoma , Secuencias Repetitivas Esparcidas , Marsupiales/clasificación , Filogenia
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