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GBA server: EST-based digital gene expression profiling.
Wu, Xin; Walker, Michael G; Luo, Jingchu; Wei, Liping.
Afiliación
  • Wu X; Center for Bioinformatics, National Laboratory of Protein Engineering and Plant Genetic Engineering, College of Life Sciences, Peking University, Beijing 100871, P. R. China.
Nucleic Acids Res ; 33(Web Server issue): W673-6, 2005 Jul 01.
Article en En | MEDLINE | ID: mdl-15980560
Expressed Sequence Tag-based gene expression profiling can be used to discover functionally associated genes on a large scale. Currently available web servers and tools focus on finding differentially expressed genes in different samples or tissues rather than finding co-expressed genes. To fill this gap, we have developed a web server that implements the GBA (Guilt-by-Association) co-expression algorithm, which has been successfully used in finding disease-related genes. We have also annotated UniGene clusters with links to several important databases such as GO, KEGG, OMIM, Gene, IPI and HomoloGene. The GBA server can be accessed and downloaded at http://gba.cbi.pku.edu.cn.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Programas Informáticos / Etiquetas de Secuencia Expresada / Perfilación de la Expresión Génica Tipo de estudio: Prognostic_studies Límite: Animals / Humans Idioma: En Revista: Nucleic Acids Res Año: 2005 Tipo del documento: Article

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Programas Informáticos / Etiquetas de Secuencia Expresada / Perfilación de la Expresión Génica Tipo de estudio: Prognostic_studies Límite: Animals / Humans Idioma: En Revista: Nucleic Acids Res Año: 2005 Tipo del documento: Article