Using N-SCAN or TWINSCAN to predict gene structures in genomic DNA sequences.
Curr Protoc Bioinformatics
; Chapter 4: 4.8.1-4.8.16, 2007 Dec.
Article
en En
| MEDLINE
| ID: mdl-18428682
ABSTRACT
N-SCAN is a gene-prediction system that combines the methods of ab initio predictors like GENSCAN with information derived from genome comparison. It is the latest in the TWINSCAN series of programs. This unit describes the use of N-SCAN to identify gene structures in eukaryotic genomic sequences. Protocols for using N-SCAN through its Web interface and from the command line in a Linux environment are provided. Detailed discussion about the appropriate parameter settings, input-sequence processing, and choice of genome for comparison are included.
Texto completo:
1
Colección:
01-internacional
Banco de datos:
MEDLINE
Asunto principal:
Algoritmos
/
Programas Informáticos
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ADN
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Alineación de Secuencia
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Mapeo Cromosómico
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Análisis de Secuencia de ADN
Tipo de estudio:
Prognostic_studies
/
Risk_factors_studies
Idioma:
En
Revista:
Curr Protoc Bioinformatics
Año:
2007
Tipo del documento:
Article