StructAlign, a Program for Alignment of Structures of DNA-Protein Complexes.
Biochemistry (Mosc)
; 80(11): 1465-8, 2015 Nov.
Article
en En
| MEDLINE
| ID: mdl-26615437
ABSTRACT
Comparative analysis of structures of complexes of homologous proteins with DNA is important in the analysis of DNA-protein recognition. Alignment is a necessary stage of the analysis. An alignment is a matching of amino acid residues and nucleotides of one complex to residues and nucleotides of the other. Currently, there are no programs available for aligning structures of DNA-protein complexes. We present the program StructAlign, which should fill this gap. The program inputs a pair of complexes of DNA double helix with proteins and outputs an alignment of DNA chains corresponding to the best spatial fit of the protein chains.
Texto completo:
1
Colección:
01-internacional
Banco de datos:
MEDLINE
Asunto principal:
Algoritmos
/
Interfaz Usuario-Computador
/
ADN
/
Proteínas
Idioma:
En
Revista:
Biochemistry (Mosc)
Año:
2015
Tipo del documento:
Article
País de afiliación:
Rusia