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Cancer Genome Interpreter annotates the biological and clinical relevance of tumor alterations.
Tamborero, David; Rubio-Perez, Carlota; Deu-Pons, Jordi; Schroeder, Michael P; Vivancos, Ana; Rovira, Ana; Tusquets, Ignasi; Albanell, Joan; Rodon, Jordi; Tabernero, Josep; de Torres, Carmen; Dienstmann, Rodrigo; Gonzalez-Perez, Abel; Lopez-Bigas, Nuria.
Afiliación
  • Tamborero D; Research Program on Biomedical Informatics (GRIB), IMIM Hospital del Mar Medical, Research Institute and Pompeu Fabra University, Barcelona, Spain.
  • Rubio-Perez C; Institute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology, Barcelona, Spain.
  • Deu-Pons J; Research Program on Biomedical Informatics (GRIB), IMIM Hospital del Mar Medical, Research Institute and Pompeu Fabra University, Barcelona, Spain.
  • Schroeder MP; Research Program on Biomedical Informatics (GRIB), IMIM Hospital del Mar Medical, Research Institute and Pompeu Fabra University, Barcelona, Spain.
  • Vivancos A; Institute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology, Barcelona, Spain.
  • Rovira A; Research Program on Biomedical Informatics (GRIB), IMIM Hospital del Mar Medical, Research Institute and Pompeu Fabra University, Barcelona, Spain.
  • Tusquets I; Charité - Universitätsmedizin Berlin, Berlin, Germany.
  • Albanell J; Vall d'Hebron Institute of Oncology, Vall d'Hebron University Hospital, Autonomous University of Barcelona, Barcelona, Spain.
  • Rodon J; Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain.
  • Tabernero J; Department of Oncology, Hospital del Mar- CIBERONC, Barcelona, Spain.
  • de Torres C; Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain.
  • Dienstmann R; Department of Oncology, Hospital del Mar- CIBERONC, Barcelona, Spain.
  • Gonzalez-Perez A; Autonomous University of Barcelona, Barcelona, Spain.
  • Lopez-Bigas N; Hospital del Mar Medical Research Institute (IMIM), Barcelona, Spain.
Genome Med ; 10(1): 25, 2018 03 28.
Article en En | MEDLINE | ID: mdl-29592813
While tumor genome sequencing has become widely available in clinical and research settings, the interpretation of tumor somatic variants remains an important bottleneck. Here we present the Cancer Genome Interpreter, a versatile platform that automates the interpretation of newly sequenced cancer genomes, annotating the potential of alterations detected in tumors to act as drivers and their possible effect on treatment response. The results are organized in different levels of evidence according to current knowledge, which we envision can support a broad range of oncology use cases. The resource is publicly available at http://www.cancergenomeinterpreter.org .
Asunto(s)

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Programas Informáticos / Genoma Humano / Anotación de Secuencia Molecular / Neoplasias Límite: Humans Idioma: En Revista: Genome Med Año: 2018 Tipo del documento: Article País de afiliación: España

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Programas Informáticos / Genoma Humano / Anotación de Secuencia Molecular / Neoplasias Límite: Humans Idioma: En Revista: Genome Med Año: 2018 Tipo del documento: Article País de afiliación: España