Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes.

Nelkner, Johanna; Henke, Christian; Lin, Timo Wentong; Pätzold, Wiebke; Hassa, Julia; Jaenicke, Sebastian; Grosch, Rita; Pühler, Alfred; Sczyrba, Alexander; Schlüter, Andreas

Nelkner, Johanna; Henke, Christian; Lin, Timo Wentong; Pätzold, Wiebke; Hassa, Julia; Jaenicke, Sebastian; Grosch, Rita; Pühler, Alfred; Sczyrba, Alexander; Schlüter, Andreas.

Afiliación

Nelkner J; Center for Biotechnology (CeBiTec), Bielefeld University, Genome Research of Industrial Microorganisms, Universitätsstraße 27, 33615 Bielefeld, Germany. jnelkner@cebitec.uni-bielefeld.de.
Henke C; Center for Biotechnology (CeBiTec), Bielefeld University, Computational Metagenomics Group, Universitätsstraße 27, 33615 Bielefeld, Germany. christian@cebitec.uni-bielefeld.de.
Lin TW; Center for Biotechnology (CeBiTec), Bielefeld University, Genome Research of Industrial Microorganisms, Universitätsstraße 27, 33615 Bielefeld, Germany. tlin@cebitec.uni-bielefeld.de.
Pätzold W; Center for Biotechnology (CeBiTec), Bielefeld University, Computational Metagenomics Group, Universitätsstraße 27, 33615 Bielefeld, Germany. WiebkePaetzold@gmx.de.
Hassa J; Center for Biotechnology (CeBiTec), Bielefeld University, Genome Research of Industrial Microorganisms, Universitätsstraße 27, 33615 Bielefeld, Germany. jhassa@cebitec.uni-bielefeld.de.
Jaenicke S; Justus-Liebig-University Gießen, Bioinformatics & Systems Biology, Heinrich-Buff-Ring 58, 35392 Gießen, Germany. Sebastian.Jaenicke@computational.bio.uni-giessen.de.
Grosch R; Leibniz-Institute of Vegetable and Ornamental Crops (IGZ) Großbeeren/Erfurt eV, Theodor-Echtermeyer-Weg 1, 14979 Großbeeren, Germany. Grosch@igzev.de.
Pühler A; Center for Biotechnology (CeBiTec), Bielefeld University, Genome Research of Industrial Microorganisms, Universitätsstraße 27, 33615 Bielefeld, Germany. puehler@cebitec.uni-bielefeld.de.
Sczyrba A; Center for Biotechnology (CeBiTec), Bielefeld University, Computational Metagenomics Group, Universitätsstraße 27, 33615 Bielefeld, Germany. asczyrba@cebitec.uni-bielefeld.de.
Schlüter A; Center for Biotechnology (CeBiTec), Bielefeld University, Genome Research of Industrial Microorganisms, Universitätsstraße 27, 33615 Bielefeld, Germany. aschluet@CeBiTec.Uni-Bielefeld.DE.

Genes (Basel) ; 10(6)2019 06 03.

Article en En | MEDLINE | ID: mdl-31163637

Asunto(s)

Agricultura; Bacterias/genética; Metagenoma/genética; Microbiología del Suelo; Actinobacteria/clasificación; Actinobacteria/genética; Amoníaco/metabolismo; Archaea/clasificación; Archaea/genética; Bacterias/clasificación; Bacteroidetes/clasificación; Bacteroidetes/genética; Alemania; Humanos; Filogenia; Proteobacteria/clasificación; Proteobacteria/genética

Palabras clave

biocontrol; carbohydrate-active enzymes; carbon dioxide fixation; differentially abundant features (DAFs); metagenomic binning; metagenomically-assembled-genomes (MAGs); plantgrowthpromotion (PGP); secondary metabolite synthesis; soil microbiome; suppressive soil

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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Microbiología del Suelo / Bacterias / Agricultura / Metagenoma Tipo de estudio: Prognostic_studies / Risk_factors_studies Límite: Humans País/Región como asunto: Europa Idioma: En Revista: Genes (Basel) Año: 2019 Tipo del documento: Article País de afiliación: Alemania

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