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Protocol for Disome Profiling to Survey Ribosome Collision in Humans and Zebrafish.
Mito, Mari; Mishima, Yuichiro; Iwasaki, Shintaro.
Afiliación
  • Mito M; RNA Systems Biochemistry Laboratory, RIKEN Cluster for Pioneering Research, Wako, Saitama 351-0198, Japan.
  • Mishima Y; Faculty of Life Sciences, Kyoto Sangyo University, Kita-ku, Kyoto 603-8555, Japan.
  • Iwasaki S; RNA Systems Biochemistry Laboratory, RIKEN Cluster for Pioneering Research, Wako, Saitama 351-0198, Japan.
STAR Protoc ; 1(3): 100168, 2020 12 18.
Article en En | MEDLINE | ID: mdl-33377062
Ribosomes often encounter obstacles during translation elongation and thus collide with each other. Disome profiling, an optimized ribosome profiling method, specifically sequences the long ribosome footprints generated from collided ribosomes produced by the ribosome pause and thus allows the survey of sites in a genome-wide manner. This protocol details the procedure from lysate preparation of human tissue cultures and zebrafish embryos to sequencing library construction. For complete details on the use and execution of this protocol, please refer to Han et al. (2020).
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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Ribosomas / Pez Cebra / Secuenciación de Nucleótidos de Alto Rendimiento Límite: Animals / Humans Idioma: En Revista: STAR Protoc Año: 2020 Tipo del documento: Article País de afiliación: Japón

Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Ribosomas / Pez Cebra / Secuenciación de Nucleótidos de Alto Rendimiento Límite: Animals / Humans Idioma: En Revista: STAR Protoc Año: 2020 Tipo del documento: Article País de afiliación: Japón