Automatic Differentiation is no Panacea for Phylogenetic Gradient Computation.

Fourment, Mathieu; Swanepoel, Christiaan J; Galloway, Jared G; Ji, Xiang; Gangavarapu, Karthik; Suchard, Marc A; Matsen Iv, Frederick A

Fourment, Mathieu; Swanepoel, Christiaan J; Galloway, Jared G; Ji, Xiang; Gangavarapu, Karthik; Suchard, Marc A; Matsen Iv, Frederick A.

Afiliación

Fourment M; Australian Institute for Microbiology and Infection, University of Technology Sydney, Ultimo, NSW, Australia.
Swanepoel CJ; Centre for Computational Evolution, The University of Auckland, Auckland, New Zealand.
Galloway JG; School of Computer Science, The University of Auckland, Auckland, New Zealand.
Ji X; Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Gangavarapu K; Department of Mathematics, Tulane University, New Orleans, Louisiana, USA.
Suchard MA; Department of Human Genetics, University of California, Los Angeles, California, USA.
Matsen Iv FA; Department of Human Genetics, University of California, Los Angeles, California, USA.

Genome Biol Evol ; 15(6)2023 06 01.

Article en En | MEDLINE | ID: mdl-37265233

Asunto(s)

Aprendizaje Automático; Modelos Estadísticos; Filogenia; Funciones de Verosimilitud; Algoritmos

Palabras clave

Bayesian inference; gradient; phylogenetics; variational inference

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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Modelos Estadísticos / Aprendizaje Automático Tipo de estudio: Risk_factors_studies Idioma: En Revista: Genome Biol Evol Asunto de la revista: BIOLOGIA / BIOLOGIA MOLECULAR Año: 2023 Tipo del documento: Article País de afiliación: Australia

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