L-GIREMI uncovers RNA editing sites in long-read RNA-seq.

Liu, Zhiheng; Quinones-Valdez, Giovanni; Fu, Ting; Huang, Elaine; Choudhury, Mudra; Reese, Fairlie; Mortazavi, Ali; Xiao, Xinshu

Liu, Zhiheng; Quinones-Valdez, Giovanni; Fu, Ting; Huang, Elaine; Choudhury, Mudra; Reese, Fairlie; Mortazavi, Ali; Xiao, Xinshu.

Afiliación

Liu Z; Department of Integrative Biology and Physiology, University of California, Los Angeles, CA, USA.
Quinones-Valdez G; Department of Integrative Biology and Physiology, University of California, Los Angeles, CA, USA.
Fu T; Molecular, Cellular, and Integrative Physiology Interdepartmental Program, University of California, Los Angeles, CA, USA.
Huang E; Bioinformatics Interdepartmental Program, University of California, Los Angeles, CA, USA.
Choudhury M; Bioinformatics Interdepartmental Program, University of California, Los Angeles, CA, USA.
Reese F; Department of Developmental and Cell Biology, University of California, Irvine, CA, USA.
Mortazavi A; Center for Complex Biological Systems, University of California, Irvine, CA, USA.
Xiao X; Department of Developmental and Cell Biology, University of California, Irvine, CA, USA.

Genome Biol ; 24(1): 171, 2023 07 20.

Article en En | MEDLINE | ID: mdl-37474948

Asunto(s)

Edición de ARN; Transcriptoma; RNA-Seq; Nucleótidos; Análisis de Secuencia de ARN/métodos; Secuenciación de Nucleótidos de Alto Rendimiento/métodos

Palabras clave

A-to-I editing; Double-stranded RNA; Mutual information

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Texto completo: 1 Colección: 01-internacional Banco de datos: MEDLINE Asunto principal: Edición de ARN / Transcriptoma Idioma: En Revista: Genome Biol Asunto de la revista: BIOLOGIA MOLECULAR / GENETICA Año: 2023 Tipo del documento: Article País de afiliación: Estados Unidos

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