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1.
J Med Chem ; 66(17): 12203-12224, 2023 09 14.
Article in English | MEDLINE | ID: mdl-37669040

ABSTRACT

Activated coagulation factor XI (FXIa) is a highly attractive antithrombotic target as it contributes to the development and progression of thrombosis but is thought to play only a minor role in hemostasis so that its inhibition may allow for decoupling of antithrombotic efficacy and bleeding time prolongation. Herein, we report our major efforts to identify an orally bioavailable, reversible FXIa inhibitor. Using a protein structure-based de novo design approach, we identified a novel micromolar hit with attractive physicochemical properties. During lead modification, a critical problem was balancing potency and absorption by focusing on the most important interactions of the lead series with FXIa while simultaneously seeking to improve metabolic stability and the cytochrome P450 interaction profile. In clinical trials, the resulting compound from our extensive research program, asundexian (BAY 2433334), proved to possess the desired DMPK properties for once-daily oral dosing, and even more importantly, the initial pharmacological hypothesis was confirmed.


Subject(s)
Factor XIa , Fibrinolytic Agents , Anticoagulants
2.
J Med Chem ; 63(21): 12574-12594, 2020 11 12.
Article in English | MEDLINE | ID: mdl-33108181

ABSTRACT

Despite extensive research on small molecule thrombin inhibitors for oral application in the past decades, only a single double prodrug with very modest oral bioavailability has reached human therapy as a marketed drug. We have undertaken major efforts to identify neutral, non-prodrug inhibitors. Using a holistic analysis of all available internal data, we were able to build computational models and apply these for the selection of a lead series with the highest possibility of achieving oral bioavailability. In our design, we relied on protein structure knowledge to address potency and identified a small window of favorable physicochemical properties to balance absorption and metabolic stability. Protein structure information on the pregnane X receptor helped in overcoming a persistent cytochrome P450 3A4 induction problem. The selected compound series was optimized to a highly potent, neutral, non-prodrug thrombin inhibitor by designing, synthesizing, and testing derivatives. The resulting optimized compound, BAY1217224, has reached first clinical trials, which have confirmed the desired pharmacokinetic properties.


Subject(s)
Anticoagulants/chemical synthesis , Drug Design , Thrombin/antagonists & inhibitors , Administration, Oral , Animals , Anticoagulants/chemistry , Anticoagulants/pharmacokinetics , Anticoagulants/pharmacology , Benzoxazoles/chemistry , Benzoxazoles/metabolism , Benzoxazoles/pharmacology , Binding Sites , Cytochrome P-450 CYP3A/genetics , Cytochrome P-450 CYP3A/metabolism , Half-Life , Humans , Imidazoles/chemistry , Imidazoles/metabolism , Imidazoles/pharmacology , Inhibitory Concentration 50 , Male , Molecular Docking Simulation , Oxazolidinones/chemistry , Oxazolidinones/metabolism , Oxazolidinones/pharmacology , Pregnane X Receptor/genetics , Pregnane X Receptor/metabolism , Rats , Rats, Wistar , Structure-Activity Relationship , Thrombin/metabolism , Transcriptional Activation/drug effects
3.
J Med Chem ; 63(20): 11639-11662, 2020 10 22.
Article in English | MEDLINE | ID: mdl-32969660

ABSTRACT

Idiopathic pulmonary fibrosis (IPF) is a rare and devastating chronic lung disease of unknown etiology. Despite the approved treatment options nintedanib and pirfenidone, the medical need for a safe and well-tolerated antifibrotic treatment of IPF remains high. The human prostaglandin F receptor (hFP-R) is widely expressed in the lung tissue and constitutes an attractive target for the treatment of fibrotic lung diseases. Herein, we present our research toward novel quinoline-based hFP-R antagonists, including synthesis and detailed structure-activity relationship (SAR). Starting from a high-throughput screening (HTS) hit of our corporate compound library, multiple parameter improvements-including increase of the relative oral bioavailability Frel from 3 to ≥100%-led to a highly potent and selective hFP-R antagonist with complete oral absorption from suspension. BAY-6672 (46) represents-to the best of our knowledge-the first reported FP-R antagonist to demonstrate in vivo efficacy in a preclinical animal model of lung fibrosis, thus paving the way for a new treatment option in IPF.


Subject(s)
Idiopathic Pulmonary Fibrosis/drug therapy , Lung/drug effects , Quinolines/chemical synthesis , Receptors, Prostaglandin/antagonists & inhibitors , Administration, Oral , Animals , Disease Models, Animal , Humans , Idiopathic Pulmonary Fibrosis/metabolism , Lung/metabolism , Lung/pathology , Male , Mice , Molecular Structure , Quinolines/chemistry , Quinolines/therapeutic use , Rats , Rats, Wistar , Structure-Activity Relationship
4.
Org Lett ; 20(1): 208-211, 2018 01 05.
Article in English | MEDLINE | ID: mdl-29257701

ABSTRACT

A method for the coupling of aryl chlorides and thiophenols using an air-stable nickel(0) catalyst is described. This thioetherification procedure can be effectively applied to a range of electronically diverse aryl/heteroaryl chlorides without more expensive metal catalysts such as palladium, iridium, or ruthenium. This investigation also illustrates both, a variety of thiol coupling partners and, in certain cases, the use of Cs2CO3.

5.
Bioorg Med Chem ; 23(13): 3552-65, 2015 Jul 01.
Article in English | MEDLINE | ID: mdl-25979375

ABSTRACT

An efficient and divergent methodology for the synthesis of new anthracenone-pyranones and anthracenone-furans is described. Key reactions discussed in these syntheses include an aldehyde promoted annulation with a ß-keto-sulfoxide, a domino alkyne insertion/carbonylation/Nu-acylation and a DMEDA promoted Castro-Stephens reaction. We also report the in vitro growth inhibition of these compounds in a range of human cancer cells. The natural product BE-26554A displayed good cell growth activity on BE2-C neuroblastoma and SMA glioblastoma cell lines at 0.17 and 0.16µM (GI50), respectively. Of note, were a CF3 functionalised anthracenone 4-pyranone (chromone) derivative 22, and an anthracenone-furan derivative 54 which displayed 0.20µM and 0.38µM growth inhibition, respectively, in the BE2-C neuroblastoma cell line.


Subject(s)
Anthracenes/chemical synthesis , Antineoplastic Agents/chemical synthesis , Chromones/chemical synthesis , Furans/chemical synthesis , Anthracenes/pharmacology , Antineoplastic Agents/pharmacology , Binding Sites , Cell Line, Tumor , Cell Proliferation/drug effects , Cell Survival/drug effects , Chromones/pharmacology , Drug Design , Drug Screening Assays, Antitumor , Furans/pharmacology , Humans , Inhibitory Concentration 50 , Molecular Structure , Neuroglia/drug effects , Neuroglia/pathology , Neurons/drug effects , Neurons/pathology , Protein Binding , Structure-Activity Relationship
6.
Org Lett ; 15(18): 4834-7, 2013 Sep 20.
Article in English | MEDLINE | ID: mdl-24006880

ABSTRACT

A domino alkyne addition/CO insertion/Nu acylation reaction to a series of novel anthrapyran-2-ones in good to excellent yields is described. In addition, an efficient synthetic sequence involving carbonylation, formation of a ß-keto-sulfoxide, and cyclization is presented en route to the antibiotic and antitumor compound (±)-BE-26554A.


Subject(s)
Alkynes/chemistry , Anthraquinones/chemical synthesis , Anti-Bacterial Agents/chemical synthesis , Antineoplastic Agents/chemical synthesis , Biological Products/chemical synthesis , Acylation , Anthraquinones/chemistry , Anthraquinones/pharmacology , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/pharmacology , Antineoplastic Agents/chemistry , Antineoplastic Agents/pharmacology , Biological Products/chemistry , Biological Products/pharmacology , Catalysis , Combinatorial Chemistry Techniques , Cyclization , Molecular Structure , Stereoisomerism
7.
Angew Chem Int Ed Engl ; 48(8): 1447-51, 2009.
Article in English | MEDLINE | ID: mdl-19145614

ABSTRACT

Shall we dance? Within the proposed mechanism for the palladium-catalyzed title reaction, the strained alkene norbornene (or norbornadiene) enters and exits the catalytic cycle in a catalytic "square dance", acting as both a promoter and a coupling partner in the formation of four carbon-carbon bonds, two of them by challenging C--H activation processes.


Subject(s)
Alkenes/chemical synthesis , Norbornanes/chemical synthesis , Alkenes/chemistry , Carbon/chemistry , Catalysis , Hydrogen/chemistry , Norbornanes/chemistry , Palladium/chemistry
8.
Chemistry ; 13(35): 9939-47, 2007.
Article in English | MEDLINE | ID: mdl-17886848

ABSTRACT

The first total synthesis of the proposed structure of delta-indomycinone has been accomplished. The key steps involve the Diels-Alder reaction of a bromonaphthoquinone (6) and 1-methoxy-3-methyl-1-trimethylsiloxy-1,3-butadiene (7) to access the anthraquinone skeleton, representing a common building block of other naturally occurring anthraquinone antibiotics, regioselective bromination of anthraquinone (14) and a highly diastereoselective alkylation of enantiomerically pure dioxolanone 8. The reported synthetic approach has the advantage of high yields, excellent selectivity and a remarkable general applicability for the total synthesis of other anthrapyran natural products. The spectroscopic data obtained for the synthetic compounds 2 and 36 are not in agreement with those reported for the natural product, and therefore revision of the assigned structure is required.


Subject(s)
Pyrans/chemistry , Anthraquinones/chemical synthesis , Anthraquinones/chemistry , Anthraquinones/metabolism , Biological Products/chemistry , Molecular Structure , Pyrans/metabolism , Pyrones/chemical synthesis , Pyrones/chemistry , Pyrones/metabolism
9.
Org Biomol Chem ; 5(8): 1191-200, 2007 Apr 21.
Article in English | MEDLINE | ID: mdl-17406717

ABSTRACT

Two high-yielding strategies for the synthesis of 4H-anthra[1,2-b]pyran antibiotics have been developed giving access to novel antitumor agent (ED(50) 1.5 microm) and to (S)-espicufolin (3). A key step for the assembly of the tetracyclic 4H-anthra[1,2-b]pyran-4,7,12-trione skeleton is the nucleophilic addition of an aryl lithium species onto an aldehyde which allows the introduction of either an ynone or 1,3-diketo side chain, serving as precursors for an acid-catalysed cyclisation.


Subject(s)
Anthraquinones/chemical synthesis , Anti-Bacterial Agents/chemical synthesis , Antineoplastic Agents/chemical synthesis , Pyrans/chemical synthesis , Anthraquinones/chemistry , Anti-Bacterial Agents/chemistry , Antineoplastic Agents/chemistry , Cell Line, Tumor , Cell Proliferation/drug effects , Drug Screening Assays, Antitumor , Humans , Molecular Structure , Pyrans/chemistry , Stereoisomerism , Structure-Activity Relationship
10.
Org Lett ; 8(25): 5873-6, 2006 Dec 07.
Article in English | MEDLINE | ID: mdl-17134294

ABSTRACT

The first total synthesis of (R)-gamma-indomycinone has been achieved which allowed the determination of the configuration of the stereogenic center of natural gamma-indomycinone as (S). The approach stands out for its generality and efficiency. [reaction: see text]


Subject(s)
Antibiotics, Antineoplastic/chemistry , Anthraquinones/chemical synthesis , Anthraquinones/chemistry , Antibiotics, Antineoplastic/chemical synthesis , Indicators and Reagents , Mass Spectrometry , Molecular Conformation , Pyrones/chemical synthesis , Pyrones/chemistry , Stereoisomerism
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