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1.
Ecol Lett ; 27(6): e14462, 2024 Jun.
Article in English | MEDLINE | ID: mdl-39031813

ABSTRACT

The rhizosphere influence on the soil microbiome and function of crop wild progenitors (CWPs) remains virtually unknown, despite its relevance to develop microbiome-oriented tools in sustainable agriculture. Here, we quantified the rhizosphere influence-a comparison between rhizosphere and bulk soil samples-on bacterial, fungal, protists and invertebrate communities and on soil multifunctionality across nine CWPs at their sites of origin. Overall, rhizosphere influence was higher for abundant taxa across the four microbial groups and had a positive influence on rhizosphere soil organic C and nutrient contents compared to bulk soils. The rhizosphere influence on abundant soil microbiomes was more important for soil multifunctionality than rare taxa and environmental conditions. Our results are a starting point towards the use of CWPs for rhizosphere engineering in modern crops.


Subject(s)
Crops, Agricultural , Microbiota , Rhizosphere , Soil Microbiology , Crops, Agricultural/microbiology , Soil/chemistry , Fungi/physiology , Animals , Bacteria/classification , Bacteria/isolation & purification , Invertebrates/microbiology , Invertebrates/physiology
2.
Ecotoxicol Environ Saf ; 283: 116783, 2024 Jul 26.
Article in English | MEDLINE | ID: mdl-39067076

ABSTRACT

Residues of herbicides with the extensive applications may impact the soil ecosystem and ultimately threaten agricultural sustainability. However, the effects of long-term herbicide residues on soil multifunctionality and the soil microbial community remain poorly understood. Here, we evaluated relationships between soil multifunctionality and soil microbial communities with residual herbicide concentrations by surveying and analyzing 62 black soil samples collected from an agricultural area in northeastern China. Total residual herbicide concentrations varied from 35 to 568 µg/kg in the soil samples. The response of soil multifunctionality to increasing residual herbicide concentrations exhibited an inverted U-shaped relationship with a peak at approximately 310 µg/kg, with net mineralized organic nitrogen (Nm) and total nitrogen (TN) exhibiting the same trend. Microbial community richness was significantly lower in soil samples with high residual herbicide concentrations (> 310 µg/kg, HG) compared to low residual herbicide concentrations (< 310 µg/kg, LG). In addition, the relative abundances of specific keystone microbial genera differed significantly between LG and HG: norank_f_Acetobacteraceae, norank_f_Caldilineaceae, Candidatus_Alysiosphaera, and Gonytrichum. The relative abundances of these genera were also significantly correlated with soil multifunctionality. Structural equation models (SEMs) further showed that herbicide residues influenced soil multifunctionality by affecting these specific keystone genera. Our study demonstrates that long-term herbicide residues significantly impact the multifunctionality of agricultural black soil, where low concentrations stimulate while high concentrations inhibit, underscoring the need for reasonable application of herbicides to maintain soil ecosystem health.

3.
Sci Rep ; 14(1): 17745, 2024 07 31.
Article in English | MEDLINE | ID: mdl-39085481

ABSTRACT

The conversion of farmland to forest in China has been recognized for its positive impact on above-ground vegetation and carbon sequestration. However, the impact on soil quality during land conversion, particularly in vulnerable karst areas, has received less attention. In this study conducted in a karst area of southwest China, eight different farmland conversion strategies were investigated to assess improvements in surface soil carbon, nitrogen, and ecosystem multi-functionality (EMF). Our results showed that farmland converted to afforestation areas or farmland that was abandoned contained higher amounts of carbon (total, organic, active) and ammonium nitrogen (NH4+-N) in the soil compared to farmland converted to grassland or maize crop. Soluble organic carbon levels were higher in afforestation and grassland areas compared to maize crop controls. By contrast, soil from grassland and abandoned land exhibited higher levels of nitrate nitrogen (NO3--N) compared to afforestation land or maize crop controls. There were no differences in NH4+-N content between any condition, except for afforestation land that specifically contained the Zenia insignis plant species. Afforestation land consistently exhibited higher EMF values than grassland. Pearson correlation analysis revealed positive relationships between soil indices and EMF scores, except for NO3--N.Random forest analysis explained 95% of the variation in soil EMF and identified specific soil factors: total carbon, organic carbon, active labile organic carbon, total nitrogen, and ammonium nitrogen, as the main drivers of soil multi-functionality. Our studies show how various reforestation strategies can enhance soil nutrient sequestration and improve soil multi-functionality of farmland in the karst areas.These findings provide insight into sustainable soil management practices for converting farmland into natural areas.


Subject(s)
Carbon , Ecosystem , Forests , Grassland , Nitrogen , Soil , Carbon/analysis , Soil/chemistry , China , Nitrogen/analysis , Farms , Agriculture/methods
4.
Microorganisms ; 12(6)2024 May 30.
Article in English | MEDLINE | ID: mdl-38930499

ABSTRACT

Soil desertification is an important challenge in global soil management, and effectively and stably restoring soil function is an urgent problem. Using synthetic microbial communities (SynComs) is a burgeoning microbial strategy aimed at enhancing soil nutrients through functional synergies among diverse microorganisms; nevertheless, their effectiveness in restoring desertified soils remains unknown. In this study, we conducted a two-year field experiment using a SynCom constructed by in situ probiotic bacteria and set up control, chemical fertilizer, and combined SynCom-chemical fertilizer (combined fertilizer) treatments to investigate the linkage between microbial communities and soil multifunctionality in the soil surface layer (0-10 cm). Both the bacterial and fungal communities differed the most under the combined fertilizer treatment compared to the control. The bacterial communities differed more under treatments of the SynCom than the chemical fertilizer, while the fungal communities differed more under the chemical fertilizer treatment than the SynCom treatment. Regarding soil function, the SynCom strengthened the correlation between enzyme activities and both bacterial communities and functional properties. pH and available potassium were the main influencing factors under the chemical fertilizer and combined fertilizer treatments. The beta-diversity of the bacterial communities was significantly correlated with soil multifunctionality. Random forest analyses showed that the SynCom significantly enhanced the bacterial communities, driving soil multifunctionality, and that some potential microbial taxa drove multiple nutrient cycles simultaneously. In summary, the SynCom effectively increased the abundance of most carbon, nitrogen, and phosphorus functional genes as well as soil enzyme activities. The bacterial community composition contributed significantly to soil multifunctionality. Hence, the development of novel microbial agents holds significant potential for improving soil functionality and managing desertification.

5.
Microorganisms ; 12(5)2024 May 07.
Article in English | MEDLINE | ID: mdl-38792779

ABSTRACT

The use of green manure can substantially increase the microbial diversity and multifunctionality of soil. Green manuring practices are becoming popular for tobacco production in China. However, the influence of different green manures in tobacco fields has not yet been clarified. Here, smooth vetch (SV), hairy vetch (HV), broad bean (BB), common vetch (CV), rapeseed (RS), and radish (RD) were selected as green manures to investigate their impact on soil multifunctionality and evaluate their effects on enhancing soil quality for tobacco cultivation in southwest China. The biomass of tobacco was highest in the SV treatment. Soil pH declined, and soil organic matter (SOM), total nitrogen (TN), and dissolved organic carbon (DOC) content in CV and BB and activity of extracellular enzymes in SV and CV treatments were higher than those in other treatments. Fungal diversity declined in SV and CV but did not affect soil multifunctionality, indicating that bacterial communities contributed more to soil multifunctionality than fungal communities. The abundance of Firmicutes, Rhizobiales, and Micrococcales in SV and CV treatments increased and was negatively correlated with soil pH but positively correlated with soil multifunctionality, suggesting that the decrease in soil pH contributed to increases in the abundance of functional bacteria. In the bacteria-fungi co-occurrence network, the relative abundance of key ecological modules negatively correlated with soil multifunctionality and was low in SV, CV, BB, and RS treatments, and this was associated with reductions in soil pH and increases in the content of SOM and nitrate nitrogen (NO3--N). Overall, we found that SV and CV are more beneficial for soil multifunctionality, and this was driven by the decrease in soil pH and the increase in SOM, TN, NO3--N, and C- and N-cycling functional bacteria.

6.
Sci Total Environ ; 931: 172862, 2024 Jun 25.
Article in English | MEDLINE | ID: mdl-38705286

ABSTRACT

Intricate microbial associations contribute greatly to the multiple functions (multifunctionality) of natural ecosystems. However, the relationship between microbial associations and soil multifunctionality (SMF) in artificial ecosystems, particularly in agricultural ecosystem with frequent fertilization, remains unclear. In this study, based on a 28-year paddy field experiment, high-throughput sequencing and networks analysis was performed to investigate changes in soil microbial (archaea, bacteria, fungi, and protists) associations and how these changes correlate with SMF under long-term fertilization. Compared to no fertilization (CK), both chemical fertilization with N, P, and K (CF) and chemical fertilization plus rice straw retention (CFR) treatments showed significantly higher soil nutrient content, grain yield, microbial abundance, and SMF. With the exception of archaeal diversity, the CF treatment exhibited the lowest bacterial, fungal, and protist diversity, and the simplest microbial co-occurrence network. In contrast, the CFR treatment had the lowest archaeal diversity, but the highest bacterial, fungal, and protist diversity. Moreover, the CFR treatment exhibited the most complex microbial co-occurrence network with the highest number of nodes, edges, and interkingdom edges. These results highlight that both chemical fertilization with and without straw retention caused high ecosystem multifunctionality while changing microbial association oppositely. Furthermore, these results indicate that rice straw retention contributes to the development of the soil microbiome and ensures the sustainability of high-level ecosystem multifunctionality.


Subject(s)
Agriculture , Fertilizers , Soil Microbiology , Soil , Fertilizers/analysis , Soil/chemistry , Agriculture/methods , Bacteria/classification , Fungi , Oryza , Ecosystem , Microbiota/drug effects , Archaea
7.
Environ Res ; 254: 119152, 2024 Aug 01.
Article in English | MEDLINE | ID: mdl-38754612

ABSTRACT

Several soil functions of alpine wetland depend on microbial communities, including carbon storage and nutrient cycling, and soil microbes are highly sensitive to hydrological conditions. Wetland degradation is often accompanied by a decline in water table. With the water table drawdown, the effects of microbial network complexity on various soil functions remain insufficiently understood. In this research, we quantified soil multifunctionality of flooded and non-flooded sites in the Lalu Wetland on the Tibetan Plateau. We employed high-throughput sequencing to investigate the microbial community responses to water table depth changes, as well as the relationships between microbial network properties and soil multifunctionality. Our findings revealed a substantial reduction in soil multifunctionality at both surface and subsurface soil layers (0-20 cm and 20-40 cm) in non-flooded sites compared to flooded sites. The α-diversity of bacteria in the surface soil of non-flooded sites was significantly lower than that in flooded sites. Microbial network properties (including the number of nodes, number of edges, average degree, density, and modularity of co-occurrence networks) exhibited significant correlations with soil multifunctionality. This study underscores the adverse impact of non-flooded conditions resulting from water table drawdown on soil multifunctionality in alpine wetland soils, driven by alterations in microbial community structure. Additionally, we identified soil pH and moisture content as pivotal abiotic factors influencing soil multifunctionality, with microbial network complexity emerging as a valuable predictor of multifunctionality.


Subject(s)
Soil Microbiology , Wetlands , Microbiota , Soil/chemistry , Tibet , Groundwater/microbiology , Groundwater/chemistry , Bacteria , Floods
8.
Sci Total Environ ; 929: 172724, 2024 Jun 15.
Article in English | MEDLINE | ID: mdl-38663601

ABSTRACT

Soil protozoa, as predators of microbial communities, profoundly influence multifunctionality of soils. Understanding the relationship between soil protozoa and soil multifunctionality (SMF) is crucial to unraveling the driving mechanisms of SMF. However, this relationship remains unclear, particularly in grassland ecosystems that are experiencing degradation. By employing 18S rRNA gene sequencing and network analysis, we examined the diversity, composition, and network patterns of the soil protozoan community along a well-characterized gradient of grassland degradation at four alpine sites, including two alpine meadows (Cuona and Jiuzhi) and two alpine steppes (Shuanghu and Gonghe) on the Qinghai-Tibetan Plateau. Our findings showed that grassland degradation decreased SMF for 1-2 times in all four sites but increased soil protozoan diversity (Shannon index) for 13.82-298.01 % in alpine steppes. Grassland degradation-induced changes in soil protozoan composition, particularly to the Intramacronucleata with a large body size, were consistently observed across all four sites. The enhancing network complexity (average degree), stability (robustness), and cooperative relationships (positive correlation) are the responses of protozoa to grassland degradation. Further analyses revealed that the increased network complexity and stability led to a decrease in SMF by affecting microbial biomass. Overall, protozoa increase their diversity and strengthen their cooperative relationships to resist grassland degradation, and emphasize the critical role of protozoan network complexity and stability in regulating SMF. Therefore, not only protozoan diversity and composition but also their interactions should be considered in evaluating SMF responses to grassland degradation, which has important implications for predicting changes in soil function under future scenarios of anthropogenic change.


Subject(s)
Grassland , Soil Microbiology , Soil , Soil/chemistry , RNA, Ribosomal, 18S , Biodiversity , Ecosystem , Environmental Monitoring
9.
Front Plant Sci ; 15: 1344948, 2024.
Article in English | MEDLINE | ID: mdl-38410734

ABSTRACT

Exploring plant diversity and ecosystem functioning in different dimensions is crucial to preserve ecological balance and advance ecosystem conservation efforts. Ecosystem transition zones serve as vital connectors linking two distinct ecosystems, yet the impact of various aspects of plant diversity (including taxonomic, functional, and phylogenetic diversity) on soil multifunctionality in these zones remains to be clarified. This study focuses on the forest-grassland transition zone in the mountains on the northern slopes of the Tianshan Mountains, and investigates vegetation and soil characteristics from forest ecosystems to grassland ecosystems to characterize plant diversity and soil functioning, as well as the driving role of plant diversity in different dimensions. In the montane forest-grassland transition zone, urease (URE) and total nitrogen (TN) play a major role in regulating plant diversity by affecting the soil nutrient cycle. Phylogenetic diversity was found to be the strongest driver of soil multifunctionality, followed by functional diversity, while taxonomic diversity was the least important driver. Diverse species were shown to play an important role in maintaining soil multifunctionality in the transition zone, especially distantly related species with high phylogeny. The study of multidimensional plant diversity and soil multifunctionality in the montane forest-grassland transition zone can help to balance the relationship between these two elements, which is crucial in areas where the ecosystem overlaps, and the application of the findings can support sustainable development in these regions.

10.
Sci Total Environ ; 921: 171191, 2024 Apr 15.
Article in English | MEDLINE | ID: mdl-38402993

ABSTRACT

Core microbiome has been proven to play crucial roles in soil function. However, we still lack knowledge on how core microbiome responds to crop residue retention, and whether they contribute to this process. Consequently, we examined the effect of residue retention on soil core and non-core microbial communities in maize seedling, mature stage and freezing period based on a multi-site field experiment in Sanjiang Plain, Northeast China. Totally, 247 bacterial amplicon sequence variants (ASVs) and 109 fungal ASVs were identified as core microbiota. Both core and non-core bacterial/fungal community composition were significantly influenced by residue retention across all study sites. Especially, the core fungal community shifted towards a saprotroph-dominated community. Normalized stochastic ratio pattern revealed that that deterministic process dominated both core and non-core microbial community assembly processes. Residue retention enhanced the deterministic process of core microbial community assembly, while exhibited opposite effect on non-core microbial community. This study also revealed that soil fungi were more sensitive to residue retention than bacteria, with a larger proportion of core fungi were enriched or depleted by residue retention. In addition, residue retention complicated core bacterial co-occurrence network, while simplified fungal network. Our results pointed out both no reduction in microbial diversity or collapse in microbial network structure after repeated freezing-thawing cycles. The potential function of core microbiome was evaluated through random forest analysis and structural equation model, the results indicated core microbiome contributed more to multifunctionality than non-core microbiome. Overall, this study strengthened our understanding of soil core microbiome in response to residue retention, and highlighted their importance in maintaining soil multifunctionality.


Subject(s)
Microbiota , Zea mays , Bacteria , Soil , Fungi , Soil Microbiology
11.
Sci China Life Sci ; 67(3): 596-610, 2024 Mar.
Article in English | MEDLINE | ID: mdl-38057623

ABSTRACT

Fertilizers are widely used to produce more food, inevitably altering the diversity and composition of soil organisms. The role of soil biodiversity in controlling multiple ecosystem services remains unclear, especially after decades of fertilization. Here, we assess the contribution of the soil functionalities of carbon (C), nitrogen (N), and phosphorus (P) cycling to crop production and explore how soil organisms control these functionalities in a 33-year field fertilization experiment. The long-term application of green manure or cow manure produced wheat yields equivalent to those obtained with chemical N, with the former providing higher soil functions and allowing the functionality of N cycling (especially soil N mineralization and biological N fixation) to control wheat production. The keystone phylotypes within the global network rather than the overall microbial community dominated the soil multifunctionality and functionality of C, N, and P cycling across the soil profile (0-100 cm). We further confirmed that these keystone phylotypes consisted of many metabolic pathways of nutrient cycling and essential microbes involved in organic C mineralization, N2O release, and biological N fixation. The chemical N, green manure, and cow manure resulted in the highest abundances of amoB, nifH, and GH48 genes and Nitrosomonadaceae, Azospirillaceae, and Sphingomonadaceae within the keystone phylotypes, and these microbes were significantly and positively correlated with N2O release, N fixation, and organic C mineralization, respectively. Moreover, our results demonstrated that organic fertilization increased the effects of the network size and keystone phylotypes on the subsoil functions by facilitating the migration of soil microorganisms across the soil profiles and green manure with the highest migration rates. This study highlights the importance of the functionality of N cycling in controlling crop production and keystone phylotypes in regulating soil functions, and provides selectable fertilization strategies for maintaining crop production and soil functions across soil profiles in agricultural ecosystems.


Subject(s)
Microbiota , Soil , Soil/chemistry , Manure , Nitrogen/metabolism , Agriculture/methods , Edible Grain/metabolism , Fertilizers/analysis , Soil Microbiology
12.
Environ Int ; 183: 108360, 2024 Jan.
Article in English | MEDLINE | ID: mdl-38128384

ABSTRACT

Although pervasive microplastics (MPs) pollution in terrestrial ecosystems invites increasing global concern, impact of MPs on soil microbial community assembly and ecosystem multifunctionality received relatively little attention. Here, we manipulated a mesocosm experiment to investigate how polyethylene MPs (PE MPs; 0, 1%, and 5%, w/w) influence ecosystem functions including plant production, soil quality, microbial community diversity and assembly, enzyme activities in carbon (C), nitrogen (N) and phosphorus (P) cycling, and multifunctionality in the maize-soil continuum. Results showed that PE MPs exerted negligible effect on plant biomass (dry weight). The treatment of 5% PE MPs caused declines in the availability of soil water, C and P, whereas enhanced soil pH and C storage. The activity of C-cycling enzymes (α/ß-1, 4-glucosidase and ß-D-cellobiohydrolase) was promoted by 1% PE MPs, while that of ß-1, 4-glucosidase was inhibited by 5% PE MPs. The 5% PE MPs reduced the activity of N-cycling enzymes (protease and urease), whereas increased that of the P-cycling enzyme (alkaline phosphatase). The 5% PE MPs shifted soil microbial community composition, and increased the number of specialist species, microbial community stability and networks resistance. Moreover, PE MPs altered microbial community assembly, with 5% treatment decreasing dispersal limitation proportion (from 13.66% to 9.96%). Overall, ecosystem multifunctionality was improved by 1% concentration, while reduced by 5% concentration of PE MPs. The activity of α/ß-1, 4-glucosidase, urease and protease, and ammonium-N content were the most important predictors of ecosystem multifunctionality. These results underscore that PE MPs can alter soil microbial community assembly and ecosystem multifunctionality, and thus development and implementation of practicable solutions to control soil MPs pollution become increasingly imperative in sustainable agricultural production.


Subject(s)
Microbiota , Microplastics , Ecosystem , Soil/chemistry , Plastics , Polyethylene , Urease , Soil Microbiology , Peptide Hydrolases , Glucosidases
13.
Mol Ecol ; 32(24): 6939-6952, 2023 Dec.
Article in English | MEDLINE | ID: mdl-37902115

ABSTRACT

Despite the known collective contribution of above- (plants) and below-ground (soil fungi) biodiversity on multiple soil functions, how the associations among plant and fungal communities regulate soil multifunctionality (SMF) differentially remains unknown. Here, plant communities were investigated at 81 plots across a typical arid inland river basin, within which associated soil fungal communities and seven soil functions (nutrients storage and biological activity) were measured in surface (0-15 cm) and subsurface soil (15-30 cm). We evaluated the relative importance of species richness and biotic associations (reflected by network complexity) on SMF. Our results demonstrated that plant species richness and plant-fungus network complexity promoted SMF in surface and subsurface soil. SMF in two soil layers was mainly determined by plant-fungus network complexity, mean groundwater depth and soil variables, among which plant-fungus network complexity played a crucial role. Plant-fungus network complexity had stronger effects on SMF in surface soil than in subsurface soil. We present evidence that plant-fungus network complexity surpassed plant-fungal species richness in determining SMF in surface and subsurface soil. Moreover, plant-fungal species richness could not directly affect SMF. Greater plant-fungal species richness indirectly promoted SMF since they ensured greater plant-fungal associations. Collectively, we concluded that interkingdom networks between plants and fungi drive SMF even in different soil layers. Our findings enhanced our knowledge of the underlying mechanisms that above- and below-ground associations promote SMF in arid inland river basins. Future study should place more emphasis on the associations among plant and microbial communities in protecting soil functions under global changes.


Subject(s)
Rivers , Soil , Soil Microbiology , Plants/microbiology , Biodiversity , Fungi/genetics , Ecosystem
14.
Sci Total Environ ; 904: 166932, 2023 Dec 15.
Article in English | MEDLINE | ID: mdl-37690759

ABSTRACT

Shifts in rhizosphere soil microorganisms of dominant plants' response to climate change profoundly impact mountain soil ecosystem multifunctionality; relatively little is known about the relationship between them and how they depend on long-term environmental drivers. Here, we conducted analyses of rhizosphere microbial altitudinal pattern, community assembly, and co-occurrence network of 6 dominant plants in six typical vegetation zones ranging from 1350 to 2900 m (a.s.l.) in Helan Mountains by absolute quantitative sequencing technology, and finally related the microbiomes to root zone soil multifunctionality ('soil multifunctionality' hereafter), the environmental dependence of the relationship was explored. It was found that the altitudinal pattern of rhizosphere soil bacterial and fungal diversities differed significantly. Higher co-occurrence and more potential interactions of Stipa breviflora and Carex coninux were found at the lowest and highest altitudes. Bacterial α diversity, the identity of some dominant bacterial and fungal taxa, had significant positive or negative effects on soil multifunctionality. The effect sizes of positive effects of microbial diversity on soil multifunctionality were greater than those of negative effects. These results indicated that the balance of positive and negative effects of microbes determines the impact of microbial diversity on soil multifunctionality. As the number of microbes at the phylum level increases, there will be a net gain in soil multifunctionality. Our study reveals that geographical and climatic factors can directly or modulate the effects of soil properties on rhizosphere microbial diversity, thereby affecting the driving effect of microbial diversity on soil multifunctionality, and points to the rhizosphere bacterial diversity rather than the fungi being strongly associated with soil multifunctionality. This work has important ecological implications for predicting how multiple environment-plant-soil-microorganisms interactions in mountain ecosystems will respond to future climate change.


Subject(s)
Ecosystem , Microbiota , Rhizosphere , Soil , Soil Microbiology , Plants , Bacteria , Fungi
15.
Front Microbiol ; 14: 1214186, 2023.
Article in English | MEDLINE | ID: mdl-37601343

ABSTRACT

Understanding the effects of groundwater depth on soil microbiota and multiple soil functions is essential for ecological restoration and the implementation of groundwater conservation. The current impact of increased groundwater levels induced by drought on soil microbiota and multifunctionality remains ambiguous, which impedes our understanding of the sustainability of water-scarce ecosystems that heavily rely on groundwater resources. This study investigated the impacts of altered groundwater depths on soil microbiota and multifunctionality in a semi-arid region. Three groundwater depth levels were studied, with different soil quality and soil moisture at each level. The deep groundwater treatment had negative impacts on diversity, network complexity of microbiota, and the relationships among microbial phylum unites. Increasing groundwater depth also changed composition of soil microbiota, reducing the relative abundance of dominant phyla including Proteobacteria and Ascomycota. Increasing groundwater depth led to changes in microbial community characteristics, which are strongly related to alterations in soil multifunctionality. Overall, our results suggest that groundwater depth had a strongly effect on soil microbiota and functionality.

16.
Front Microbiol ; 14: 1188229, 2023.
Article in English | MEDLINE | ID: mdl-37389339

ABSTRACT

Introduction: Microbes play key roles in maintaining soil ecological functions. Petroleum hydrocarbon contamination is expected to affect microbial ecological characteristics and the ecological services they provide. In this study, the multifunctionalities of contaminated and uncontaminated soils in an aged petroleum hydrocarbon-contaminated field and their correlation with soil microbial characteristics were analyzed to explore the effect of petroleum hydrocarbons on soil microbes. Methods: Soil physicochemical parameters were determined to calculate soil multifunctionalities. In addition, 16S high-throughput sequencing technology and bioinformation analysis were used to explore microbial characteristics. Results: The results indicated that high concentrations of petroleum hydrocarbons (565-3,613 mg•kg-1, high contamination) reduced soil multifunctionality, while low concentrations of petroleum hydrocarbons (13-408 mg•kg-1, light contamination) might increase soil multifunctionality. In addition, light petroleum hydrocarbon contamination increased the richness and evenness of microbial community (p < 0.01), enhanced the microbial interactions and widened the niche breadth of keystone genus, while high petroleum hydrocarbon contamination reduced the richness of the microbial community (p < 0.05), simplified the microbial co-occurrence network, and increased the niche overlap of keystone genus. Conclusion: Our study demonstrates that light petroleum hydrocarbon contamination has a certain improvement effect on soil multifunctionalities and microbial characteristics. While high contamination shows an inhibitory effect on soil multifunctionalities and microbial characteristics, which has significance for the protection and management of petroleum hydrocarbon-contaminated soil.

17.
J Hazard Mater ; 454: 131525, 2023 07 15.
Article in English | MEDLINE | ID: mdl-37146323

ABSTRACT

Contaminated soil at smelting sites affects land utilization and environmental regulation, resulting in soil degradation. However, the extent to which potentially toxic elements (PTEs) contribute to site soil degradation and the relationship between soil multifunctionality and microbial diversity in the process remains poorly understood. In this study, we investigated changes in soil multifunctionality and the correlation between soil multifunctionality and microbial diversity under the influence of PTEs. The change in microbial community diversity was closely related to changes in soil multifunctionality caused by PTEs. Microbial diversity, not richness, drives the delivery of ecosystem services in smelting site PTEs-stressed environments. Structural equation modeling identified that soil contamination, microbial taxonomic profile and microbial functional profile could explain 70% of the variance in soil multifunctionality. Furthermore, our findings demonstrate that PTEs limit soil multifunctionality by affecting soil microbial communities and functionality, whilst the positive effect of microorganisms on soil multifunctionality was mainly driven by the fungal diversity and biomass. Finally, specific fungal genera closely related to soil multifunctionality were identified, with saprophytic fungi being particularly important for maintaining multiple soil functions. The results of the study provide potential guidance for the remediation, pollution control practices and mitigation of degraded soils at smelting sites.


Subject(s)
Microbiota , Soil Pollutants , Ecosystem , Soil/chemistry , Lead/toxicity , Biomass , Soil Microbiology , Soil Pollutants/toxicity , Soil Pollutants/analysis
18.
Glob Chang Biol ; 29(9): 2384-2398, 2023 05.
Article in English | MEDLINE | ID: mdl-36644803

ABSTRACT

The role of soil organic carbon (SOC) sequestration as a 'win-win' solution to both climate change and food insecurity receives an increasing promotion. The opportunity may be too good to be missed! Yet the tremendous complexity of the two issues at stake calls for a detailed and nuanced examination of any potential solution, no matter how appealing. Here, we critically re-examine the benefits of global SOC sequestration strategies on both climate change mitigation and food production. While estimated contributions of SOC sequestration to climate change vary, almost none take SOC saturation into account. Here, we show that including saturation in estimations decreases any potential contribution of SOC sequestration to climate change mitigation by 53%-81% towards 2100. In addition, reviewing more than 21 meta-analyses, we found that observed yield effects of increasing SOC are inconsistent, ranging from negative to neutral to positive. We find that the promise of a win-win outcome is confirmed only when specific land management practices are applied under specific conditions. Therefore, we argue that the existing knowledge base does not justify the current trend to set global agendas focusing first and foremost on SOC sequestration. Away from climate-smart soils, we need a shift towards soil-smart agriculture, adaptative and adapted to each local context, and where multiple soil functions are quantified concurrently. Only such comprehensive assessments will allow synergies for land sustainability to be maximised and agronomic requirements for food security to be fulfilled. This implies moving away from global targets for SOC in agricultural soils. SOC sequestration may occur along this pathway and contribute to climate change mitigation and should be regarded as a co-benefit.


Subject(s)
Carbon , Soil , Agriculture , Carbon Sequestration , Food , Meta-Analysis as Topic
19.
Sci Total Environ ; 863: 161029, 2023 Mar 10.
Article in English | MEDLINE | ID: mdl-36549533

ABSTRACT

In drylands, soil microorganisms play a vital role in restoring degraded soils, and soil microbiota is significantly affected by human activities and climate events, such as seasonal freezing and thawing. However, the response of soil microbes to freezing and thawing, as well as their properties in drylands agroecosystems, remains unknown. This study investigated the effects of seasonal freezing and thawing on soil fungal and bacterial communities, multifunctionality, and soil microbial quality in a dryland agroecosystem. It has been observed that seasonal freezing and thawing promoted nutrient releases such as total carbon and available phosphorus. After thawing, soil catalase and cellulase activities increased while acid phosphatase and urease activities and total nitrogen content at topsoil decreased. Soil microbial biomass carbon content at 0-40 cm depth was significantly reduced by 94.77 %. Importantly, freezing and thawing considerably shifted the composition of fungal groups, while the soil bacterial community exhibited more stress tolerance to freezing-thawing. Compared to pre-freezing, the relative abundance of dominant fungal phyla such as Basidiomycota and Mortierellomycota decreased. At the same time, Ascomycota increased after thawing, and the relative abundance of pathogenic fungus also increased. For dominant bacteria phylum, freezing and thawing increased the relative abundance of Proteobacteria and Gemmatimonadetes while Micrococcaceae declined. Freezing and thawing significantly increased bacterial diversity and evenness by 4.94 % and 4.19 %, respectively, but decreased fungal richness and diversity by 23.49 % and 14.91 %, respectively. The minimum and total data sets were used to evaluate soil quality and we found that freezing and thawing significantly negatively impacted soil multifunctionality and microbial quality. In summary, this study demonstrates that the seasonal freezing-thawing has a significant negative impact on soil microbial quality and multifunctionality, and accelerates soil degeneration in dryland agroecosystem.


Subject(s)
Soil Microbiology , Soil , Humans , Freezing , Bacteria , China , Carbon
20.
Huan Jing Ke Xue ; 43(11): 5274-5285, 2022 Nov 08.
Article in Chinese | MEDLINE | ID: mdl-36437099

ABSTRACT

Soil microbial communities play an important role in driving a variety of ecosystem functions and ecological processes and are the primary driving force in maintaining the biogeochemical cycle. It has been observed that soil microbial diversity decreases with land use intensification and climate change in the global background. It is essential to investigate whether the reduction in soil microbial diversity can affect soil multifunctionality. Thus, in this study, the dilution-to-extinction method was used to construct the gradient of soil microbial diversity, combined with high-throughput sequencing to explore the impact of the reduction in bacterial, fungal, and protist diversity on soil multifunctionality. The results showed that the soil microbial alpha diversity (richness and Shannon index) was significantly lower than that of the original soil. Principal coordinate analysis (PCoA) showed that the microbial community structure of original soil was significantly different from that of diluted soil, and the response of bacterial and fungal communities to diluted soil was higher than that of protists. The regression model showed that there was a significant negative linear relationship between the average response value of soil multi-function and the index of microbial diversity, indicating that the change in soil microbial community was the key factor in regulating soil multifunctionality. The regression model showed that there was a significant negative linear relationship between soil multifunctionality and microbial diversity, indicating that the change in soil microbial community was the key factor to regulate soil multi-kinetic energy. Through the aggregated boosted tree analysis (ABT) and regression model, we found that some specific microbial groups, such as the Solacocozyma and Holtermaniella of fungi and Rudaea of bacteria, could significantly promote the change in soil multifunctionality, which showed that key microbial taxa play an indicative role in biological processes. Furthermore, the structural equation model revealed that bacteria could affect soil multifunctionality through the interaction between microbiomes, which was the key biological factor driving the change in soil multifunctionality. This study provided experimental evidence for the impact of soil microbial diversity on soil multifunctionality, and promoted the notion that maintaining a certain diversity of soil microbial community in a single agricultural ecosystem, especially the diversity of key microbial taxa, is of great significance to the sustainable development of ecosystem function in the future.


Subject(s)
Microbiota , Soil , Soil/chemistry , Soil Microbiology , Biodiversity , Climate Change , Bacteria/genetics
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