ABSTRACT
Primitive cells are believed to have been self-assembled vesicular structures with minimal metabolic components, that were capable of self-maintenance and self-propagation in early Earth geological settings. The coevolution and self-assembly of biomolecules, such as amphiphiles, peptides, and nucleic acids, or their precursors, were essential for protocell emergence. Here, we present a novel class of amphiphiles-amino acid-fatty alcohol esters-that self-assemble into stable primitive membrane compartments under a wide range of geochemical conditions. Glycine n-octyl ester (GOE) and isoleucine n-octyl ester (IOE), the condensation ester products of glycine or isoleucine with octanol (OcOH), are expected to form at a mild temperature by wet-dry cycles. The GOE forms micelles in acidic aqueous solutions (pH 2-7) and vesicles at intermediate pH (pH 7.3-8.2). When mixed with cosurfactants (octanoic acid [OcA]; OcOH, or decanol) in different mole fractions [XCosurfactant = 0.1-0.5], the vesicle stability range expands significantly to span the extremely acidic to mildly alkaline (pH 2-8) and extremely alkaline (pH 10-11) regions. Only a small mole fraction of cosurfactant [XCosurfactant = 0.1] is needed to make stable vesicular structures. Notably, these GOE-based vesicles are also stable in the presence of high concentrations of divalent cations, even at low pHs and in simulated Hadean seawater composition (without sulfate). To better understand the self-assembly behavior of GOE-based systems, we devised complementary molecular dynamics computer simulations for a series of mixed GOE/OcA systems under simulated acidic pHs. The resulting calculated critical packing parameter values and self-assembly behavior were consistent with our experimental findings. The IOE is expected to show similar self-assembly behavior. Thus, amino acid-fatty alcohol esters, a novel chimeric amphiphile class composed of an amino acid head group and a fatty alcohol tail, may have aided in building protocell membranes, which were stable in a wide variety of geochemical circumstances and were conducive to supporting replication and self-maintenance. The present work contributes to our body of work supporting our hypothesis for synergism and coevolution of (proto)biomolecules on early Earth.
Subject(s)
Amino Acids , Fatty Alcohols , Esters , Isoleucine , GlycineABSTRACT
Benzoic acid is the simplest aromatic carboxylic acid that is also a common water contaminant. Its structural and amphiphilic properties are shared by many other contaminants of concern. Based on a molecular dynamics study, this work reports the competitive adsorption of benzoic acid with water on the curved exteriors of carbon nanotubes of varying oxygen content. With the help of cylindrically approximated pair correlation functions, carboxyl-carboxyl associations were found to serve as an additional mechanism providing stability to the adsorbed benzoic acid on tube exteriors. These associations are secondary to the main aromatic-aromatic interactions during the adsorption process and therefore were not sufficient to establish the energy hierarchy at the adsorbed state with increase in surface oxygen content. The same mechanism was previously ascribed to the adsorption of the structurally similar but bulkier tannic acid. Both water and benzoic acid were organized into numerous mobility groups and a correspondence was established between species residence time and the average translation time taken to escape the tube vicinity. Vigorous exchange of water molecules among the first adsorption shell, the second adsorption shell, and the immediate vicinity radially outside was estimated to take place within a short time of about 10 ps.
Subject(s)
Nanotubes, Carbon , Adsorption , Benzoic Acid/chemistry , Molecular Probes , Nanotubes, Carbon/chemistry , Oxygen , Water/chemistryABSTRACT
Removal of harmful chemicals from water is paramount to environmental cleanliness and safety. As such, need for materials that will serve this purpose is in the forefront of environmental research that pertains to water purification. Here we show that bundles of single walled carbon nanotubes (SWNTs), synthesized by direct thermal decomposition of ferrocene (Fe(C5H5)2), can remove emerging contaminants like benzoic acid from water with high efficiencies. Experimental adsorption isotherm studies indicate that the sorption capacity of benzoic acid on these carbon nanotubes (CNTs) can be as high as 375 mg/g, which is significantly higher (in some cases an order of magnitude) than those reported previously for other adsorbents of benzoic acid such as activated carbon cloth, modified bentonite and commercially available graphitized multiwall carbon nanotubes (MWNTs). Our Molecular Dynamics (MD) simulation studies of experimental scenarios provided major insights related to this process of adsorption. The MD simulations indicate that, high binding energy sites present in SWNT bundles are majorly responsible for their enhanced adsorptive behavior compared to isolated MWNTs. These findings indicate that SWNT materials can be developed as scalable materials for efficient removal of environmental contaminants as well as for other sorption-based applications.
ABSTRACT
A large quantity of emerging contaminants are ionizable, and the ionized compounds display different adsorption behaviors than their neutral counterparts. In particular, a strong intermolecular force, negative charge assisted hydrogen bonding ((-)CAHB), was recently identified, which explains the unusually strong adsorption of negatively charged compounds on carbon nanotubes with oxygen-containing functional groups. However, most previous studies only probed molecules with one benzene ring. The adsorption of ionizable compounds with more than one benzene ring and additional functional groups has not been examined. This study investigated the effect of surface functionalization, molecular size and structure of six aromatic carboxylic acids on their adsorption on multi-walled carbon nanotubes (MWNTs) in batch reactors. In addition, the short-range interactions of the neutral acids with MWNTs were calculated to evaluate the effect of aromaticity and bulkiness. Hydrophobicity and electrostatic interactions dominate the intermolecular forces between ionized contaminants and MWNT surfaces. pH dependent octanol/water partitioning coefficient (Dow) is a more precise indicator of the adsorption of ionizable compounds on MWNTs. (-)CAHB is a significant force only for compounds with one benzene ring. Hydroxyl and carboxyl functional groups displayed similar capacity to form (-)CAHB, as indicated by the release of hydroxide ions.