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1.
Chembiochem ; : e202400538, 2024 Jul 29.
Article in English | MEDLINE | ID: mdl-39073268

ABSTRACT

We report a novel, reversible, cell-permeable, pH-sensor, TRapH. TRapH afforded a pH-sensitive ratiometric emission response in the pH range ~3-6, enabling imaging and quantification of pH in living cells. The biological-applicability of TRapH was illustrated via live-tracking of intracellular pH dynamics in living mammalian cells induced by a synthetic H+-transporter.

2.
ACS Appl Bio Mater ; 5(6): 2990-3005, 2022 06 20.
Article in English | MEDLINE | ID: mdl-35579235

ABSTRACT

Here, four nontraditional fluorescent polymers (NTFPs) of varying N,N-dimethyl-2-propenamide (DMPA) and butyl prop-2-enoate (BPE) mole ratios, i.e., 2:1 (NTFP1), 4:1 (NTFP2), 8:1 (NTFP3), and 16:1 (NTFP4), are prepared via random polymerization in water. The maximum fluorescence enhancement of NTFP3 makes it suitable for ratiometric pH sensing, Cu(II) sensing, and pH-dependent cell imaging of Madin-Darby canine kidney (MDCK) cells. The oxygen donor functionalities of NTFP3 involved in binding and sensing with Cu(II) ions are studied by absorption, emission, electron paramagnetic resonance, Fourier transform infrared (FTIR), and O1s/Cu2p X-ray photoelectron spectroscopies (XPS). The spectral responses of the ratiometric pH sensor within 1.5-11.5 confirm 22 and 44 nm red shifts in absorption and ratiometric emission, respectively. The striking color changes from blue (436 nm) to green (480 nm) via an increase in pH are thought to be the stabilization of the charged canonical form of tertiary amide, i.e., -C(O-)═N+(CH3)2, realized from the changes in the absorption/fluorescence spectra and XPS/FTIR analyses. The through-space n-π* interactions in the NTFP3 aggregate, N-branching-associated rigidity, and nonconventional intramolecular hydrogen bondings of adjacent NTFP3 moieties in the NTFP3 aggregate contribute to aggregation-enhanced emissions (AEEs). Here, structures of NTFP3, NTFP3 aggregate, and Cu(II)-NTFP3; absorption; n-π* interactions; hydrogen bondings; AEEs; and binding with Cu(II) are ascertained by density functional theory, time-dependent density functional theory, and reduced density gradient calculations. The excellent limits of detection and Stern-Volmer constants of NTFP3 are 2.24 nM/0.14234 ppb and 4.26 × 103 M-1 at pH = 6.5 and 0.95 nM/0.06037 ppb and 4.90 × 103 M-1 at pH = 8.0, respectively. Additionally, the Stokes shift and binding energy of NTFP3 are 13,636 cm-1/1.69 eV and -4.64 eV, respectively. The pH-dependent MDCK cell imaging ability of noncytotoxic NTFP3 is supported via fluorescence imaging and 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide assay.


Subject(s)
Optical Imaging , Polymers , Animals , Dogs , Hydrogen , Hydrogen-Ion Concentration , Optical Imaging/methods , Polymers/chemistry , Spectrometry, Fluorescence
3.
Methods Mol Biol ; 2391: 99-107, 2022.
Article in English | MEDLINE | ID: mdl-34686980

ABSTRACT

Cytosolic pH (pHcyt) is a key factor controlling cell fate. The genetically encoded pH-sensor pHluorin has proven highly valuable for studies on pHcyt in many living organisms. pHluorin displays a bimodal excitation spectrum with peaks at 395 nm and 475 nm, which is dependent on pH. Here we describe two different protocols for determining pHcyt in the soil-borne fungal pathogen Fusarium oxysporum, based either on population or single-cell analysis.


Subject(s)
Cytosol , Fusarium , Green Fluorescent Proteins , Hydrogen-Ion Concentration
4.
Dyes Pigm ; 61(3): 227-234, 2004 Jun.
Article in English | MEDLINE | ID: mdl-33828347

ABSTRACT

We characterize a new water soluble fluorescent probe sensitive to changes in pH. The new probe shows spectral shifts and intensity changes in different pH media, in a wavelength ratiometric and colorimetric manner. Subsequently, changes in pH can readily be determined around the physiological level. The new probe's response is based on the ability of the boronic acid group to interact with strong bases like OH-, changing from the neutral form of the boronic acid group [R-B(OH)2] to the anionic R-B-(OH)3 form, which is an electron donating group. The presence of an electron deficient quaternary heterocyclic nitrogen center and a strong electron donating amino group in the 6-position, on the quinolinium backbone, provides for the spectral changes observed upon OH- complexation. In addition, the presence of the amino group in the 6-position of the quinolinium backbone, suppresses the response of the boronic acid containing probe towards mono saccharides such as glucose and fructose, which are present in many biological fluids, allowing for the predominant pH sensitivity. Finally we compare our findings to those of a control compound that does not contain the boronic acid group.

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