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1.
J Med Chem ; 64(4): 1763-1785, 2021 02 25.
Article in English | MEDLINE | ID: mdl-33534577

ABSTRACT

Malaria poses a significant threat to approximately half of the world's population with an annual death toll close to half a million. The emergence of resistance to front-line antimalarials in the most lethal human parasite species, Plasmodium falciparum (Pf), threatens progress made in malaria control. The prospect of losing the efficacy of antimalarial drugs is driving the search for small molecules with new modes of action. Asexual reproduction of the parasite is critically dependent on the recycling of amino acids through catabolism of hemoglobin (Hb), which makes metalloaminopeptidases (MAPs) attractive targets for the development of new drugs. The Pf genome encodes eight MAPs, some of which have been found to be essential for parasite survival. In this article, we discuss the biological structure and function of each MAP within the Pf genome, along with the drug discovery efforts that have been undertaken to identify novel antimalarial candidates of therapeutic value.


Subject(s)
Aminopeptidases/antagonists & inhibitors , Antimalarials/pharmacology , Plasmodium falciparum/drug effects , Protozoan Proteins/antagonists & inhibitors , Amino Acid Sequence , Aminopeptidases/chemistry , Aminopeptidases/physiology , Animals , Antimalarials/chemistry , Catalytic Domain , Cell Line , Drug Discovery , Humans , Parasitic Sensitivity Tests , Plasmodium falciparum/enzymology , Protozoan Proteins/chemistry , Protozoan Proteins/physiology
2.
Front Immunol ; 11: 1576, 2020.
Article in English | MEDLINE | ID: mdl-32793222

ABSTRACT

In the human genome, the aminopeptidases ERAP1, ERAP2 and LNPEP lie contiguously on chromosome 5. They share sequence homology, functions and associations with immune-mediated diseases. By analyzing their multifaceted activities as well as their expression in the zoological scale, we suggest here that the progenitor of the three aminopeptidases might be LNPEP from which the other two aminopeptidases could have derived by gene duplications. We also propose that their functions are partially redundant. More precisely, the evolutionary story of the three aminopeptidases might have been dictated by their role in regulating the renin-angiotensin system, which requires their controlled and coordinated expression. This hypothesis is supported by the many species that lack one or the other gene as well as by the lack of ERAP2 in rodents and a null expression in 25% of humans. Finally, we speculate that their role in antigen presentation has been acquired later on during evolution. They have therefore been diversified between those residing in the ER, ERAP1 and ERAP2, whose role is to refine the MHC-I peptidomes, and LNPEP, mostly present in the endosomal vesicles where it can contribute to antigen cross-presentation or move to the cell membrane as receptor for angiotensin IV. Their association with autoinflammatory/autoimmune diseases can therefore be two-fold: as "contributors" to the shaping of the immune-peptidomes as well as to the regulation of the vascular response.


Subject(s)
Aminopeptidases/physiology , Cystinyl Aminopeptidase/physiology , Minor Histocompatibility Antigens/physiology , Aminopeptidases/genetics , Aminopeptidases/immunology , Animals , Antigen Presentation , Autoimmune Diseases/genetics , Autoimmune Diseases/immunology , Cystinyl Aminopeptidase/genetics , Cystinyl Aminopeptidase/immunology , Evolution, Molecular , Humans , Inflammation , Minor Histocompatibility Antigens/genetics , Minor Histocompatibility Antigens/immunology , Renin-Angiotensin System
3.
J Microbiol ; 58(4): 330-339, 2020 Apr.
Article in English | MEDLINE | ID: mdl-32103444

ABSTRACT

Streptococcus pneumoniae is a Gram-positive pathogen with high morbidity and mortality globally but some of its pathogenesis remains unknown. Previous research has provided evidence that aminopeptidase N (PepN) is most likely a virulence factor of S. pneumoniae. However, its role in S. pneumoniae virulence and its interaction with the host remains to be confirmed. We generated a pepN gene deficient mutant strain and found that its virulence for mice was significantly attenuated as were in vitro adhesion and invasion of host cells. The PepN protein could induce a strong innate immune response in vivo and in vitro and induced secretion of IL-6 and TNF-α by primary peritoneal macrophages via the rapid phosphorylation of MAPK and PI3K/AKT signaling pathways and this was confirmed using specific pathway inhibitors. In conclusion, PepN is a novel virulence factor that is essential for the virulence of S. pneumoniae and induces host innate immunity via MAPK and PI3K/AKT signaling.


Subject(s)
Aminopeptidases/physiology , Pneumococcal Infections/immunology , Streptococcus pneumoniae/pathogenicity , Virulence Factors/physiology , A549 Cells , Aminopeptidases/genetics , Animals , Bacterial Proteins/physiology , Cell Adhesion , Female , Host Microbial Interactions , Humans , Immunity, Innate , MAP Kinase Signaling System , Macrophages, Peritoneal/immunology , Mice , Mice, Inbred C57BL , Phosphatidylinositol 3-Kinases/metabolism , Proto-Oncogene Proteins c-akt/metabolism , Virulence
4.
Biol Pharm Bull ; 43(2): 207-214, 2020.
Article in English | MEDLINE | ID: mdl-32009107

ABSTRACT

Endoplasmic reticulum aminopeptidase 1 (ERAP1) is well known as a processing enzyme of antigenic peptides, which are presented to major histocompatibility complex (MHC) class I molecules in the lumen of endoplasmic reticulum. Besides antigen processing, ERAP1 performs multiple functions in various cells depending on its intracellular and extracellular localization. Of note is the secretion of ERAP1 into the extracellular milieu in response to inflammatory stimuli, which further activates immune cells including macrophages and natural killer cells. Furthermore, secreted ERAP1 enhances the expression of pro-inflammatory cytokines like tumor necrosis factor-α, interleukin-1ß, and interleukin-6. Such findings indicate that ERAP1 plays a significant role in the field of innate and acquired immunity. This review summarizes the functional analyses of ERAP1 that support our current understanding of its role as more than an antigenic peptide-processing enzyme, specifically emphasizing on its secretory form.


Subject(s)
Aminopeptidases/metabolism , Aminopeptidases/physiology , Endoplasmic Reticulum/metabolism , Endoplasmic Reticulum/physiology , Aminopeptidases/genetics , Animals , Humans
5.
JCI Insight ; 4(21)2019 11 01.
Article in English | MEDLINE | ID: mdl-31672933

ABSTRACT

Salt sensitivity of blood pressure (SSBP) and hypertension are common, but the underlying mechanisms remain unclear. Endoplasmic reticulum aminopeptidase 1 (ERAP1) degrades angiotensin II (ANGII). We hypothesized that decreasing ERAP1 increases BP via ANGII-mediated effects on aldosterone (ALDO) production and/or renovascular function. Compared with WT littermate mice, ERAP1-deficient (ERAP1+/-) mice had increased tissue ANGII, systolic and diastolic BP, and SSBP, indicating that ERAP1 deficiency leads to volume expansion. However, the mechanisms underlying the volume expansion differed according to sex. Male ERAP1+/- mice had increased ALDO levels and normal renovascular responses to volume expansion (decreased resistive and pulsatility indices and increased glomerular volume). In contrast, female ERAP1+/- mice had normal ALDO levels but lacked normal renovascular responses. In humans, ERAP1 rs30187, a loss-of-function gene variant that reduces ANGII degradation in vitro, is associated with hypertension. In our cohort from the Hypertensive Pathotype (HyperPATH) Consortium, there was a significant dose-response association between rs30187 risk alleles and systolic and diastolic BP as well as renal plasma flow in men, but not in women. Thus, lowering ERAP1 led to volume expansion and increased BP. In males, the volume expansion was due to elevated ALDO with normal renovascular function, whereas in females the volume expansion was due to impaired renovascular function with normal ALDO levels.


Subject(s)
Aminopeptidases/physiology , Blood Pressure/physiology , Minor Histocompatibility Antigens/physiology , Renin-Angiotensin System/physiology , Sex Factors , Adult , Aldosterone/biosynthesis , Aminopeptidases/genetics , Angiotensin II/metabolism , Animals , Female , Humans , Male , Mice , Middle Aged , Minor Histocompatibility Antigens/genetics , Sodium Chloride, Dietary/administration & dosage
6.
Mol Cell Proteomics ; 18(11): 2244-2261, 2019 11.
Article in English | MEDLINE | ID: mdl-31501224

ABSTRACT

Treatments are emerging for the neuronal ceroid lipofuscinoses (NCLs), a group of similar but genetically distinct lysosomal storage diseases. Clinical ratings scales measure long-term disease progression and response to treatment but clinically useful biomarkers have yet to be identified in these diseases. We have conducted proteomic analyses of brain and cerebrospinal fluid (CSF) from mouse models of the most frequently diagnosed NCL diseases: CLN1 (infantile NCL), CLN2 (classical late infantile NCL) and CLN3 (juvenile NCL). Samples were obtained at different stages of disease progression and proteins quantified using isobaric labeling. In total, 8303 and 4905 proteins were identified from brain and CSF, respectively. We also conduced label-free analyses of brain proteins that contained the mannose 6-phosphate lysosomal targeting modification. In general, we detect few changes at presymptomatic timepoints but later in disease, we detect multiple proteins whose expression is significantly altered in both brain and CSF of CLN1 and CLN2 animals. Many of these proteins are lysosomal in origin or are markers of neuroinflammation, potentially providing clues to underlying pathogenesis and providing promising candidates for further validation.


Subject(s)
Aminopeptidases/physiology , Biomarkers/blood , Biomarkers/cerebrospinal fluid , Brain/metabolism , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/physiology , Lysosomes/metabolism , Membrane Glycoproteins/physiology , Molecular Chaperones/physiology , Neuronal Ceroid-Lipofuscinoses/diagnosis , Serine Proteases/physiology , Thiolester Hydrolases/physiology , Animals , Disease Models, Animal , Female , Male , Mice , Mice, Inbred C57BL , Mice, Knockout , Neuronal Ceroid-Lipofuscinoses/blood , Neuronal Ceroid-Lipofuscinoses/cerebrospinal fluid , Proteome/analysis , Tripeptidyl-Peptidase 1
7.
Nat Commun ; 10(1): 3304, 2019 07 24.
Article in English | MEDLINE | ID: mdl-31341163

ABSTRACT

The Hedgehog (Hh) pathway is essential for embryonic development and tissue homeostasis. Aberrant Hh signaling may occur in a wide range of human cancers, such as medulloblastoma, the most common brain malignancy in childhood. Here, we identify endoplasmic reticulum aminopeptidase 1 (ERAP1), a key regulator of innate and adaptive antitumor immune responses, as a previously unknown player in the Hh signaling pathway. We demonstrate that ERAP1 binds the deubiquitylase enzyme USP47, displaces the USP47-associated ßTrCP, the substrate-receptor subunit of the SCFßTrCP ubiquitin ligase, and promotes ßTrCP degradation. These events result in the modulation of Gli transcription factors, the final effectors of the Hh pathway, and the enhancement of Hh activity. Remarkably, genetic or pharmacological inhibition of ERAP1 suppresses Hh-dependent tumor growth in vitro and in vivo. Our findings unveil an unexpected role for ERAP1 in cancer and indicate ERAP1 as a promising therapeutic target for Hh-driven tumors.


Subject(s)
Aminopeptidases/physiology , Minor Histocompatibility Antigens/physiology , Ubiquitin-Specific Proteases/metabolism , beta-Transducin Repeat-Containing Proteins/metabolism , Aminopeptidases/genetics , Aminopeptidases/metabolism , Animals , Carcinogenesis/genetics , Hedgehog Proteins/metabolism , Mice , Minor Histocompatibility Antigens/genetics , Minor Histocompatibility Antigens/metabolism , NIH 3T3 Cells , Protein Stability , Proteolysis , Signal Transduction
8.
Biochimie ; 166: 27-37, 2019 Nov.
Article in English | MEDLINE | ID: mdl-31108122

ABSTRACT

The huge exopeptidase, tripeptidyl-peptidase II (TPP II), appears to be involved in a large number of important biological processes. It is present in the cytosol of most eukaryotic cells, where it removes tripeptides from free amino termini of longer peptides through a 'molecular ruler mechanism'. Its main role appears to be general protein degradation, together with the proteasome. The activity is increased by stress, such as during starvation and muscle wasting, and in tumour cells. Overexpression of TPP II leads to accelerated cell growth, genetic instability and resistance to apoptosis, whereas inhibition or down-regulation of TPP II renders cells sensitive to apoptosis. Although it seems that humans can survive without TPP II, it is not without consequences. Recently, patients with loss-of-function mutations in the TPP2 gene have been identified. They suffer from autoimmunity leading to leukopenia and other consequences. Furthermore, a missense mutation in the TPP2 gene is associated with a sterile brain inflammation condition mimicking multiple sclerosis. This review will summarise what is known today regarding the activity and structure of this very large enzyme complex, and its potential function in various cellular processes. It is clear that more research is needed to identify natural substrates and/or interaction partners of TPP II, which can explain the observed effects in different cellular contexts.


Subject(s)
Aminopeptidases , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases , Serine Endopeptidases , Aminopeptidases/chemistry , Aminopeptidases/genetics , Aminopeptidases/physiology , Animals , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/chemistry , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/genetics , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/physiology , Drosophila melanogaster , Humans , Mice , Mutation , Proteolysis , Rats , Serine Endopeptidases/chemistry , Serine Endopeptidases/genetics , Serine Endopeptidases/physiology , Substrate Specificity
9.
PLoS One ; 14(2): e0211632, 2019.
Article in English | MEDLINE | ID: mdl-30707714

ABSTRACT

Streptococcus pneumoniae (Spn) is an asymptomatic colonizer of the human nasopharynx but can also cause disease in the inner ear, meninges, lung and blood. Although various mechanisms contribute to the effective clearance of Spn, opsonophagocytosis by neutrophils is perhaps most critical. Upon phagocytosis, Spn is exposed to various degradative molecules, including a family of neutrophil serine proteases (NSPs) that are stored within intracellular granules. Despite the critical importance of NSPs in killing Spn, the bacterial proteins that are degraded by NSPs leading to Spn death are still unknown. In this report, we identify a 90kDa protein in a purified cell wall (CW) preparation, aminopeptidase N (PepN) that is degraded by the NSP neutrophil elastase (NE). Since PepN lacked a canonical signal sequence or LPxTG motif, we created a mutant expressing a FLAG tagged version of the protein and confirmed its localization to the CW compartment. We determined that not only is PepN a CW-localized protein, but also is a substrate of NE in the context of intact Spn cells. Furthermore, in comparison to wild-type TIGR4 Spn, a mutant strain lacking PepN demonstrated a significant hyper-resistance phenotype in vitro in the presence of purified NE as well as in opsonophagocytic assays with purified human neutrophils ex vivo. Taken together, this is the first study to demonstrate that PepN is a CW-localized protein and a substrate of NE that contributes to the effective killing of Spn by NSPs and human neutrophils.


Subject(s)
Aminopeptidases/metabolism , Bacterial Proteins/metabolism , Neutrophils/metabolism , Streptococcus pneumoniae/metabolism , Aminopeptidases/physiology , Bacterial Proteins/genetics , Bacterial Proteins/physiology , CD13 Antigens/metabolism , Cell Wall/metabolism , Healthy Volunteers , Humans , Leukocyte Elastase/metabolism , Lung/metabolism , Phagocytosis , Serine Proteases/metabolism , Streptococcus pneumoniae/pathogenicity , Young Adult
10.
Curr Med Chem ; 26(15): 2715-2729, 2019.
Article in English | MEDLINE | ID: mdl-29446724

ABSTRACT

Endoplasmic Reticulum aminopeptidase 1 and 2 are two homologous enzymes that help generate peptide ligands for presentation by Major Histocompatibility Class I molecules. Their enzymatic activity influences the antigenic peptide repertoire and indirectly controls adaptive immune responses. Accumulating evidence suggests that these two enzymes are tractable targets for the regulation of immune responses with possible applications ranging from cancer immunotherapy to treating inflammatory autoimmune diseases. Here, we review the state-of-the-art in the development of inhibitors of ERAP1 and ERAP2 as well as their potential and limitations for clinical applications.


Subject(s)
Aminopeptidases/antagonists & inhibitors , Enzyme Inhibitors/pharmacology , Aminopeptidases/chemistry , Aminopeptidases/genetics , Aminopeptidases/physiology , Animals , Autoimmunity/physiology , Catalytic Domain , Cell Line, Tumor , Drug Design , Enzyme Inhibitors/chemistry , Histocompatibility Antigens/immunology , Histocompatibility Antigens/metabolism , Humans , Immunity, Innate/physiology , Minor Histocompatibility Antigens/chemistry , Minor Histocompatibility Antigens/genetics , Minor Histocompatibility Antigens/physiology , Neoplasms/enzymology , Neoplasms/immunology , Polymorphism, Single Nucleotide
11.
Biomed Pharmacother ; 84: 1954-1958, 2016 Dec.
Article in English | MEDLINE | ID: mdl-27829551

ABSTRACT

Tripeptidyl peptidase II (TPPII) is a multifunctional cytoplasmic serine protease. The main function of TPPII is to cleave proteasome-generated peptides into tripeptides, which can then be further degraded into free amino acids. Recent evidence suggests that TPPII plays an important role in epitope generation, but the mechanisms of TPPII in MHC class I antigen presentation remain unclear. Recent research has shed new light on the mechanisms and functions of TPPII in MHC class I antigen presentation. We therefore provide an updated review of the biological characteristics of TPPII and explore its role in MHC class I antigen presentation.


Subject(s)
Aminopeptidases/physiology , Cytoplasm/metabolism , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/physiology , Histocompatibility Antigens Class I/metabolism , Receptor Cross-Talk/physiology , Serine Endopeptidases/physiology , Signal Transduction/physiology , Animals , Humans
12.
Eur J Immunol ; 45(12): 3257-68, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26399368

ABSTRACT

The immunodominant MART-1(26(27)-35) epitope, liberated from the differentiation antigen melanoma antigen recognized by T cells/melanoma antigen A (MART-1/Melan-A), has been frequently targeted in melanoma immunotherapy, but with limited clinical success. Previous studies suggested that this is in part due to an insufficient peptide supply and epitope presentation, since proteasomes containing the immunosubunits ß5i/LMP7 (LMP, low molecular weight protein) or ß1i/LMP2 and ß5i/LMP7 interfere with MART-1(26-35) epitope generation in tumor cells. Here, we demonstrate that in addition the IFN-γ-inducible proteasome subunit ß2i/MECL-1 (multicatalytic endopeptidase complex-like 1), proteasome activator 28 (PA28), and ER-resident aminopeptidase 1 (ERAP1) impair MART-1(26-35) epitope generation. ß2i/MECL-1 and PA28 negatively affect C- and N-terminal cleavage and therefore epitope liberation from the proteasome, whereas ERAP1 destroys the MART-1(26-35) epitope by overtrimming activity. Constitutive expression of PA28 and ERAP1 in melanoma cells indicate that both interfere with MART-1(26-35) epitope generation even in the absence of IFN-γ. In summary, our results provide first evidence that activities of different antigen-processing components contribute to an inefficient MART-1(26-35) epitope presentation, suggesting the tumor cell's proteolytic machinery might have an important impact on the outcome of epitope-specific immunotherapies.


Subject(s)
Aminopeptidases/physiology , Epitopes/immunology , Melanoma/immunology , Muscle Proteins/physiology , Neoplasm Proteins/immunology , Proteasome Endopeptidase Complex/physiology , T-Lymphocytes/immunology , Cell Line, Tumor , Cysteine Endopeptidases/physiology , Humans , Minor Histocompatibility Antigens
13.
Rheumatology (Oxford) ; 54(9): 1549-56, 2015 Sep.
Article in English | MEDLINE | ID: mdl-26070942

ABSTRACT

There has been significant progress in our understanding of the pathogenesis of AS. The advent of genome-wide association studies has increased the known loci associated with AS to more than 40. The endoplasmic reticulum resident aminopeptidases (ERAP) 1 and 2 were identified in this manner and are of particular interest. There appears to be a genetic as well as a functional interaction of ERAP1 and 2 with HLA-B27 based on the known functions of these molecules. Recent studies on the structure, immunological effects and the peptide-trimming properties of ERAP 1 and 2 have helped to provide insight into their pathogenic potential in AS. In this review, we explore the role of ERAP 1 and 2 in the pathogenesis of AS.


Subject(s)
Aminopeptidases/physiology , Endoplasmic Reticulum/enzymology , Spondylitis, Ankylosing/etiology , Spondylitis, Ankylosing/physiopathology , Aminopeptidases/genetics , Endoplasmic Reticulum Stress/physiology , HLA-B27 Antigen/genetics , HLA-B27 Antigen/physiology , Humans , Minor Histocompatibility Antigens , Spondylitis, Ankylosing/genetics
14.
Curr Opin Rheumatol ; 27(4): 357-63, 2015 Jul.
Article in English | MEDLINE | ID: mdl-26002027

ABSTRACT

PURPOSE OF REVIEW: To review the recent developments in our understanding of endoplasmic reticulum (ER) aminopeptidase 1 (ERAP1) function in relation to its role in major histocompatibility complex (MHC) class I peptide presentation and human leukocyte antigen (HLA) class I-associated diseases. RECENT FINDINGS: ERAP1 polymorphisms exhibiting loss-of-function have been associated with protection from AS. The aminopeptidase function of ERAP1 optimizes peptides for binding and presentation by MHC class I. Most of the studies have revealed reduced MHC class I expression in situations of reduced ERAP1 function. Under these circumstances, the presented peptides are often N-terminally extended, and cell surface complexes are unstable and fall apart more readily. In contrast, peptides presented by HLA-B*27 : 05 when ERAP1 is silenced are frequently extended on the C-terminus. Recent work has emphasized on the importance of assessing the function of allotypes encoded by ERAP1 haplotypes, rather than effects of single amino acid substitutions. The allotypes found in a series of AS patients were poorer at restoring HLA-B27 expression than allotypes found in unaffected controls, which may seem contrary to the genetic data linking loss-of-function to protection. SUMMARY: More work is needed to understand how ERAP1 variants associated with risk and protection influence the quality and quantity of peptides available for binding to HLA class I molecules in the ER. Moreover, we need to determine allele-specific effects of ERAP1 variants in the context of HLA-B*51 and HLA-Cw*6, which are associated with Behçet's disease and psoriasis, respectively.


Subject(s)
Aminopeptidases/genetics , Rheumatic Diseases/genetics , Aminopeptidases/physiology , Genetic Predisposition to Disease , HLA-B27 Antigen/immunology , Haplotypes , Histocompatibility Antigens Class I/metabolism , Humans , Minor Histocompatibility Antigens , Polymorphism, Single Nucleotide , Rheumatic Diseases/immunology
15.
Biol Reprod ; 92(3): 67, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25568306

ABSTRACT

Environmental exposure to endocrine-disrupting chemicals (EDCs) is one cause of premature ovarian failure (POF). Hexavalent chromium (CrVI) is a heavy metal EDC widely used in more than 50 industries, including chrome plating, welding, wood processing, and tanneries. Recent data from U.S. Environmental Protection Agency indicate increased levels of Cr in drinking water from several American cities, which potentially predispose residents to various health problems. Recently, we demonstrated that gestational exposure to CrVI caused POF in F1 offspring. The current study was performed to identify the molecular mechanism behind CrVI-induced POF. Pregnant rats were treated with 25 ppm of potassium dichromate from Gestational Day (GD) 9.5 to GD 14.5 through drinking water, and the fetuses were exposed to CrVI through transplacental transfer. Ovaries were removed from the fetuses or pups on Embryonic Day (ED) 15.5, ED 17.5, Postnatal Day (PND) 1, PND 4, or PND 25, and various analyses were performed. Results showed that gestational exposure to CrVI: 1) increased germ cell/oocyte apoptosis and advanced germ cell nest (GCN) breakdown; 2) increased X-prolyl aminopeptidase (Xpnpep) 2, a POF marker in humans, during GCN breakdown; 3) decreased Xpnpep2 during postnatal follicle development; and 4) increased colocalization of Xpnpep2 with Col3 and Col4. We also found that Xpnpep2 inversely regulated the expression of Col1, Col3, and Col4 in all the developmental stages studied. Thus, CrVI advanced GCN breakdown and increased follicle atresia in F1 female progeny by targeting Xpnpep2.


Subject(s)
Aminopeptidases/physiology , Chromium/adverse effects , Chromium/pharmacology , Follicular Phase/drug effects , Ovum/drug effects , Primary Ovarian Insufficiency/chemically induced , Primary Ovarian Insufficiency/physiopathology , Animals , Apoptosis/drug effects , Carcinogens, Environmental/adverse effects , Carcinogens, Environmental/pharmacology , Cell Survival/drug effects , Cell Survival/physiology , Collagen Type I/physiology , Collagen Type III/physiology , Collagen Type IV/physiology , Disease Models, Animal , Female , Follicular Atresia/drug effects , Follicular Atresia/physiology , Follicular Phase/physiology , Ovary/drug effects , Ovary/physiology , Ovum/physiology , Pregnancy , Rats
16.
Prog Retin Eye Res ; 44: 99-110, 2015 Jan.
Article in English | MEDLINE | ID: mdl-25434765

ABSTRACT

Birdshot chorioretinopathy (BSCR) is a bilateral chronic intraocular inflammation or posterior uveitis that preferentially affects middle-aged Caucasians. BSCR is characterized by distinctive multiple choroidal hypopigmented lesions in combination with retinal vasculitis and vitritis, and the extraordinary feature that virtually all patients are HLA-A29 positive. Its pathophysiology is still poorly understood. BSCR is the strongest documented association between HLA and disease in humans, which makes it an excellent model for studying the underlying immuno-genetic mechanisms of HLA class I-associated diseases. Although the association with HLA-A29 suggests that it is directly involved in the presentation of peptide antigens to T cells, the exact contribution of HLA-A29 to the pathophysiology of BSCR remains enigmatic. This article revisits the HLA-A29 peptidome using insights from recent studies and discusses why HLA-A29 can be considered a canonical antigen presenting molecule. The first genome-wide association study facilitated novel concepts into a disease mechanism beyond HLA-A29 that includes strong genetic predisposition for the ERAP2 gene that affects antigen processing for HLA class I. Furthermore, patients manifest with pro-inflammatory cytokine profiles and pathogenic T cell subsets that are associated with IL-17-linked inflammation. We are beginning to understand that the underlying biology of BSCR comprises various pathologic aspects branched into multiple molecular pathways. We propose to employ Systems Medicine to reveal their dynamic interplay for a holistic view of the immunopathology of this intriguing archetypal HLA class I-associated disease.


Subject(s)
Chorioretinitis , Aminopeptidases/genetics , Aminopeptidases/physiology , Animals , Autoimmunity , Birdshot Chorioretinopathy , Chorioretinitis/genetics , Chorioretinitis/immunology , Chorioretinitis/physiopathology , Disease Models, Animal , Genome-Wide Association Study , HLA-A Antigens/physiology , Humans , T-Lymphocytes/immunology , Th17 Cells/immunology
17.
J Insect Physiol ; 70: 22-35, 2014 Nov.
Article in English | MEDLINE | ID: mdl-25193546

ABSTRACT

Cockroaches are among the first insects to appear in the fossil record. This work is part of ongoing research on insects at critical points in the evolutionary tree to disclose evolutionary trends in the digestive characteristics of insects. A transcriptome (454 Roche platform) of the midgut of Periplanetaamericana was searched for sequences of digestive enzymes. The selected sequences were manually curated. The complete or nearly complete sequences showing all characteristic motifs and highly expressed (reads counting) had their predicted sequences checked by cloning and Sanger sequencing. There are two chitinases (lacking mucin and chitin-binding domains), one amylase, two α- and three ß-glucosidases, one ß-galactosidase, two aminopeptidases (none of the N-group), one chymotrypsin, 5 trypsins, and none ß-glucanase. Electrophoretic and enzymological data agreed with transcriptome data in showing that there is a single ß-galactosidase, two α-glucosidases, one preferring as substrate maltase and the other aryl α-glucoside, and two ß-glucosidases. Chromatographic and enzymological data identified 4 trypsins, one chymotrypsin (also found in the transcriptome), and one non-identified proteinase. The major digestive trypsin is identifiable to a major P. americana allergen (Per a 10). The lack of ß-glucanase expression in midguts was confirmed, thus lending support to claims that those enzymes are salivary. A salivary amylase was molecularly cloned and shown to be different from the one from the midgut. Enzyme distribution showed that most digestion occurs under the action of salivary and midgut enzymes in the foregut and anterior midgut, except the posterior terminal digestion of proteins. A counter-flux of fluid may be functional in the midgut of the cockroach to explain the low excretory rate of digestive enzymes. Ultrastructural and immunocytochemical localization data showed that amylase and trypsin are released by both merocrine and apocrine secretion mainly from gastric caeca. Finally, a discussion on Polyneoptera digestive physiology is provided.


Subject(s)
Digestion/physiology , Periplaneta/physiology , Aminopeptidases/genetics , Aminopeptidases/physiology , Animals , Base Sequence , Chitinases/genetics , Chitinases/physiology , Chymotrypsin/genetics , Chymotrypsin/physiology , Gastrointestinal Tract/anatomy & histology , Gastrointestinal Tract/diagnostic imaging , Glucosidases/genetics , Glucosidases/physiology , Microscopy, Electron , Molecular Sequence Data , Peptide Hydrolases/genetics , Peptide Hydrolases/physiology , Periplaneta/anatomy & histology , Periplaneta/enzymology , Periplaneta/genetics , Polymerase Chain Reaction , Transcriptome/genetics , Trypsin/genetics , Trypsin/physiology , Ultrasonography , beta-Galactosidase/genetics , beta-Galactosidase/physiology , beta-Glucosidase/genetics , beta-Glucosidase/physiology
18.
Mol Immunol ; 57(1): 12-21, 2014 Jan.
Article in English | MEDLINE | ID: mdl-23916068

ABSTRACT

The endoplasmic reticulum aminopeptidase 1 (ERAP1) is a multifunctional enzyme involved in the final processing of Major Histocompatibility Complex class I (MHC-I) ligands and with a significant influence in the stability and immunological properties of MHC-I proteins. ERAP1 polymorphism is associated with ankylosing spondylitis among HLA-B27-positive individuals and the altered enzymatic activity of natural variants has significant effects on the HLA-B27 peptidome, suggesting a critical pathogenetic role of peptides in this disease. Likewise, the association of ERAP1 with other MHC-I associated disorders and its epistasis with their susceptibility MHC alleles point out to a general role of the MHC-I peptidome in these diseases. The functional interaction between ERAP1 and HLA-B27 or other MHC-I molecules may be related to the processing of specific epitopes, or to a more general peptide-dependent influence on other biological features of the MHC-I proteins. In addition, from a consideration of the reported functions of ERAP1, including its involvement in angiogenesis and macrophage activation, a more complex and multi-level influence in the inflammatory and immune pathways operating in these diseases cannot be ruled out.


Subject(s)
Aminopeptidases/chemistry , Aminopeptidases/physiology , HLA-B27 Antigen/genetics , Spondylitis, Ankylosing/genetics , Spondylitis, Ankylosing/metabolism , Alleles , Aminopeptidases/genetics , Animals , Endoplasmic Reticulum/enzymology , Endoplasmic Reticulum/genetics , Endoplasmic Reticulum/metabolism , Genes, MHC Class I , Genetic Predisposition to Disease , Humans , Macrophage Activation/genetics , Macrophage Activation/immunology , Minor Histocompatibility Antigens , Neovascularization, Physiologic/genetics , Neovascularization, Physiologic/immunology , Polymorphism, Single Nucleotide , Spondylitis, Ankylosing/immunology
19.
J Proteome Res ; 12(9): 3823-30, 2013 Sep 06.
Article in English | MEDLINE | ID: mdl-23964590

ABSTRACT

We present a novel straightforward method for enrichment of N-terminal peptides, utilizing charge-based fractional diagonal chromatography (ChaFRADIC). Our method is robust, easy to operate, fast, specific, and more sensitive than existing methods, enabling the differential quantitation of 1459 nonredundant N-terminal peptides between two S. cerevisiae samples within 10 h of LC-MS, starting from only 50 µg of protein per condition and analyzing only 40% of the obtained fractions. Using ChaFRADIC we compared mitochondrial proteins from wild-type and icp55Δ yeast (30 µg each). Icp55 is an intermediate cleaving peptidase, which, following mitochondrial processing peptidase (MPP)-dependent cleavage of signal sequences, removes a single amino acid from a specific set of proteins according to the N-end rule. Using ChaFRADIC we identified 36 icp55 substrates, 14 of which were previously unknown, expanding the set of known icp55 substrates to a total of 52 proteins. Interestingly, a novel substrate, Isa2, is likely processed by Icp55 in two consecutive steps and thus might represent the first example of a triple processing event in a mitochondrial precursor protein. Thus, ChaFRADIC is a powerful and practicable tool for protease and peptidase research, providing the sensitivity to characterize even samples that can be obtained only in small quantities.


Subject(s)
Aminopeptidases/chemistry , Mitochondrial Proteins/isolation & purification , Peptide Fragments/isolation & purification , Proteome/metabolism , Saccharomyces cerevisiae Proteins/chemistry , Saccharomyces cerevisiae Proteins/isolation & purification , Saccharomyces cerevisiae/enzymology , Amino Acid Sequence , Aminopeptidases/physiology , Chromatography, Gel , Chromatography, Ion Exchange , Mitochondrial Proteins/chemistry , Mitochondrial Proteins/metabolism , Molecular Sequence Data , Peptide Fragments/chemistry , Peptide Mapping , Protein Processing, Post-Translational , Proteolysis , Proteomics , Saccharomyces cerevisiae Proteins/metabolism , Saccharomyces cerevisiae Proteins/physiology , Sensitivity and Specificity , Sequence Analysis, Protein , Substrate Specificity , Tandem Mass Spectrometry
20.
Brain ; 136(Pt 5): 1488-507, 2013 May.
Article in English | MEDLINE | ID: mdl-23587805

ABSTRACT

Tripeptidyl peptidase 1 (TPP1) deficiency causes CLN2 disease, late infantile (or classic late infantile neuronal ceroid lipofuscinosis), a paediatric neurodegenerative disease of autosomal recessive inheritance. Patients suffer from blindness, ataxia, epilepsy and cognitive defects, with MRI indicating widespread brain atrophy, and profound neuron loss is evident within the retina and brain. Currently there are no effective therapies for this disease, which causes premature death in adolescence. Zebrafish have been successfully used to model a range of neurological and behavioural abnormalities. The aim of this study was to characterize the pathological and functional consequences of Tpp1 deficiency in zebrafish and to correlate these with human CLN2 disease, thereby providing a platform for drug discovery. Our data show that homozygous tpp1(sa0011) mutant (tpp1(sa0011)(-/-)) zebrafish display a severe, progressive, early onset neurodegenerative phenotype, characterized by a significantly small retina, a small head and curved body. The mutant zebrafish have significantly reduced median survival with death occurring 5 days post-fertilization. As in human patients with CLN2 disease, mutant zebrafish display storage of subunit c of mitochondrial ATP-synthase, hypertrophic lysosomes as well as localized apoptotic cell death in the retina, optic tectum and cerebellum. Further neuropathological phenotypes of these mutants provide novel insights into mechanisms of pathogenesis in CLN2 disease. Secondary neurogenesis in the retina, optic tectum and cerebellum is impaired and axon tracts within the spinal cord, optic nerve and the posterior commissure are disorganized, with the optic nerve failing to reach its target. This severe neurodegenerative phenotype eventually results in functional motor impairment, but this is preceded by a phase of hyperactivity that is consistent with seizures. Importantly, both of these locomotion phenotypes can be assayed in an automated manner suitable for high-throughput studies. Our study provides proof-of-principle that tpp1(sa0011)(-/-) mutants can utilize the advantages of zebrafish for understanding pathogenesis and drug discovery in CLN2 disease and other epilepsies.


Subject(s)
Aminopeptidases/deficiency , Cell Proliferation , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/deficiency , Disease Progression , Neuronal Ceroid-Lipofuscinoses/enzymology , Neuronal Ceroid-Lipofuscinoses/pathology , Serine Proteases/deficiency , Aminopeptidases/genetics , Aminopeptidases/physiology , Animals , Animals, Genetically Modified , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/genetics , Dipeptidyl-Peptidases and Tripeptidyl-Peptidases/physiology , Disease Models, Animal , Growth Inhibitors/deficiency , Growth Inhibitors/genetics , Growth Inhibitors/physiology , Humans , Motor Activity/physiology , Neurodegenerative Diseases/enzymology , Neurodegenerative Diseases/genetics , Neurodegenerative Diseases/pathology , Neuronal Ceroid-Lipofuscinoses/genetics , Serine Proteases/genetics , Serine Proteases/physiology , Tripeptidyl-Peptidase 1 , Zebrafish
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