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1.
Sci Rep ; 14(1): 13107, 2024 06 07.
Article in English | MEDLINE | ID: mdl-38849451

ABSTRACT

The environmental risk of Lyme disease, defined by the density of Ixodes scapularis ticks and their prevalence of Borrelia burgdorferi infection, is increasing across the Ottawa, Ontario region, making this a unique location to explore the factors associated with environmental risk along a residential-woodland gradient. In this study, we collected I. scapularis ticks and trapped Peromyscus spp. mice, tested both for tick-borne pathogens, and monitored the intensity of foraging activity by deer in residential, woodland, and residential-woodland interface zones of four neighbourhoods. We constructed mixed-effect models to test for site-specific characteristics associated with densities of questing nymphal and adult ticks and the infection prevalence of nymphal and adult ticks. Compared to residential zones, we found a strong increasing gradient in tick density from interface to woodland zones, with 4 and 15 times as many nymphal ticks, respectively. Infection prevalence of nymphs and adults together was 15 to 24 times greater in non-residential zone habitats. Ecological site characteristics, including soil moisture, leaf litter depth, and understory density, were associated with variations in nymphal density and their infection prevalence. Our results suggest that high environmental risk bordering residential areas poses a concern for human-tick encounters, highlighting the need for targeted disease prevention.


Subject(s)
Borrelia burgdorferi , Forests , Ixodes , Lyme Disease , Animals , Ixodes/microbiology , Borrelia burgdorferi/isolation & purification , Borrelia burgdorferi/pathogenicity , Lyme Disease/epidemiology , Lyme Disease/transmission , Lyme Disease/microbiology , Prevalence , Ontario/epidemiology , Peromyscus/microbiology , Nymph/microbiology , Ecosystem , Humans , Population Density , Mice , Deer/microbiology
2.
Appl Environ Microbiol ; 90(6): e0010524, 2024 Jun 18.
Article in English | MEDLINE | ID: mdl-38742897

ABSTRACT

Pododermatitis, also known as treponeme-associated hoof disease (TAHD), presents a significant challenge to elk (Cervus canadensis) populations in the northwestern USA, with Treponema spp. consistently implicated in the lesion development. However, identifying species-specific Treponema strains from these lesions is hindered by its culture recalcitrance and limited genomic information. This study utilized shotgun sequencing, in silico genome reconstruction, and comparative genomics as a culture-independent approach to identify metagenome-assembled Treponema genomes (MATGs) from skin scraping samples collected from captive elk experimentally challenged with TAHD. The genomic analysis revealed 10 new MATGs, with 6 representing novel genomospecies associated with pododermatitis in elk and 4 corresponding to previously identified species-Treponema pedis and Treponema phagedenis. Importantly, genomic signatures of novel genomospecies identified in this study were consistently detected in biopsy samples of free-ranging elk diagnosed with TAHD, indicating a potential etiologic association. Comparative metabolic profiling of the MATGs against other Treponema genomes showed a distinct metabolic profile, suggesting potential host adaptation or geographic uniqueness of these newly identified genomospecies. The discovery of novel Treponema genomospecies enhances our understanding of the pathogenesis of pododermatitis and lays the foundation for the development of improved molecular surveillance tools to monitor and manage the disease in free-ranging elk.IMPORTANCETreponema spp. play an important role in the development of pododermatitis in free-ranging elk; however, the species-specific detection of Treponema from pododermatitis lesions is challenging due to culture recalcitrance and limited genomic information. The study utilized shotgun sequencing and in silico genome reconstruction to identify novel Treponema genomospecies from elk with pododermatitis. The discovery of the novel Treponema species opens new avenues to develop molecular diagnostic and epidemiologic tools for the surveillance of pododermatitis in elk. These findings significantly enhance our understanding of the genomic landscape of the Treponemataceae consortium while offering valuable insights into the etiology and pathogenesis of emerging pododermatitis in elk populations.


Subject(s)
Deer , Genome, Bacterial , Treponema , Treponemal Infections , Treponema/genetics , Treponema/classification , Treponema/isolation & purification , Animals , Deer/microbiology , Treponemal Infections/microbiology , Treponemal Infections/veterinary , Foot Diseases/microbiology , Foot Diseases/veterinary , Phylogeny , Dermatitis/microbiology , Dermatitis/veterinary
3.
Microbiol Spectr ; 12(7): e0412023, 2024 Jul 02.
Article in English | MEDLINE | ID: mdl-38785439

ABSTRACT

In this study, we investigated the prevalence of Bartonella in deer from Qilian County, Qinghai Province, China. Blood samples were collected from 69 red deer, 40 white-lipped deer, and 27 sika deer. The detection of Bartonella spp. has been conducted. The overall prevalence of Bartonella was 33.6% (46/135). Species-specific prevalence was 50.72% in red deer (35/69), 20.00% in white-lipped deer (8/40), and 11.11% in sika deer (3/27). There were significant differences in the prevalence rates among the different species of deer. The amplicon sequence comparison revealed a high homology of the ruminant-associated Bartonella spp. Nanopore sequencing further confirmed the results. Bartonella reads were presented in each of the qPCR-positive samples. Phylogenetic analysis indicated that the Bartonella sequences detected in deer blood were closely related to ruminant-borne Bartonella spp. In summary, we reported the Bartonella prevalence of different deer species in Qinghai, and there were at least one species of ruminant-associated Bartonella, B. schoenbuchensis. IMPORTANCE: This is the first report about Bartonella infections in the deer population from China. We found that there were two species of Bartonella and an unidentified species of Bartonella among the unculturing strains carried by these deer populations. We first used Nanopore sequencing to detect Bartonella from deer blood samples and indicated that Nanopore sequencing is beneficial to detect pathogens due to its advantage of real-time and high sensitivity.


Subject(s)
Bartonella Infections , Bartonella , Deer , Phylogeny , Animals , Bartonella/genetics , Bartonella/isolation & purification , Bartonella/classification , Deer/microbiology , Bartonella Infections/epidemiology , Bartonella Infections/veterinary , Bartonella Infections/microbiology , China/epidemiology , Prevalence , Tibet/epidemiology , Multiplex Polymerase Chain Reaction/methods , Multiplex Polymerase Chain Reaction/veterinary , DNA, Bacterial/genetics
4.
J Wildl Dis ; 60(3): 605-614, 2024 07 01.
Article in English | MEDLINE | ID: mdl-38725305

ABSTRACT

Surveillance data collected in the period 2017-20 for Brucella spp. in wildlife of the Lombardy Region in northern Italy were used to describe the exposure of the wildlife species to Brucella spp. in wild boar (Sus scrofa), European brown hare (Lepus europaeus), fallow deer (Dama dama), red deer (Cervus elaphus), and roe deer (Capreolus capreolus). Among the tested species, wild boar (n=6,440) showed the highest percentage of seropositive samples (5.9%). Notably, wild boars of perifluvial area of the Po River showed higher percentages of positivity than those of the pre-Alpine district. In addition, during the hunting season in 2018, 95 organs (uterus or testes, spleen, and submandibular lymph nodes) from wild boar of the perifluvial area of the Po River were collected for bacteriological examination. Brucella suis was isolated in culture from 18.9% of tested lymph nodes. These serological and microbiological results highlight the presence of B. suis in wild boar and suggest the importance of wild boar as a reservoir for B. suis. Comparison of the spatial distribution of Brucella-seropositive wild boars with the location of backyard swine farms revealed a higher chance of contact between the two populations only in the areas where the lower percentage of seropositive samples was observed. Conversely, the high percentage of seropositive samples observed in the Po River area coupled with positive microbiological cultures suggest a greater risk of infection for the humans directly or indirectly involved in wild boar hunting activity. These results may serve as a basis to establish sound wildlife management and to adopt education campaigns aimed at reducing the risk of human infection in people involved in wild boar hunting related activities.


Subject(s)
Animals, Wild , Brucella , Brucellosis , Deer , Hares , Sus scrofa , Animals , Italy/epidemiology , Brucellosis/veterinary , Brucellosis/epidemiology , Brucellosis/microbiology , Deer/microbiology , Sus scrofa/microbiology , Brucella/isolation & purification , Animals, Wild/microbiology , Hares/microbiology , Female , Male , Disease Reservoirs/veterinary , Disease Reservoirs/microbiology , Swine Diseases/epidemiology , Swine Diseases/microbiology , Swine , Brucella suis/isolation & purification
5.
Microbiol Spectr ; 12(7): e0382923, 2024 Jul 02.
Article in English | MEDLINE | ID: mdl-38771094

ABSTRACT

Mycobacterium bovis causes animal tuberculosis in livestock and wildlife, with an impact on animal health and production, wildlife management, and public health. In this work, we sampled a multi-host tuberculosis community from the official hotspot risk area of Portugal over 16 years, generating the largest available data set in the country. Using phylogenetic and ecological modeling, we aimed to reconstruct the history of circulating lineages across the livestock-wildlife interface to inform intervention and the implementation of genomic surveillance within the official eradication plan. We find evidence for the co-circulation of M. bovis European 1 (Eu1), Eu2, and Eu3 clonal complexes, with Eu3 providing sufficient temporal signal for further phylogenetic investigation. The Eu3 most recent common ancestor (bovine) was dated in the 1990s, subsequently transitioning to wildlife (red deer and wild boar). Isolate clustering based on sample metadata was used to inform phylogenetic inference, unravelng frequent transmission between two clusters that represent an ecological corridor of previously unrecognized importance in Portugal. The latter was associated with transmission at the livestock-wildlife interface toward locations with higher temperature and precipitation, lower agriculture and road density, and lower host densities. This is the first analysis of M. bovis Eu3 complex in Iberia, shedding light on background ecological factors underlying long-term transmission and informing where efforts could be focused within the larger hotspot risk area of Portugal. IMPORTANCE: Efforts to strengthen surveillance and control of animal tuberculosis (TB) are ongoing worlwide. Here, we developed an eco-phylodynamic framework based on discrete phylogenetic approaches informed by M. bovis whole-genome sequence data representing a multi-host transmission system at the livestock-wildlife interface, within a rich ecological landscape in Portugal, to understand transmission processes and translate this knowledge into disease management benefits. We find evidence for the co-circulation of several M. bovis clades, with frequent transmission of the Eu3 lineage among cattle and wildlife populations. Most transition events between different ecological settings took place toward host, climate and land use gradients, underscoring animal TB expansion and a potential corridor of unrecognized importance for M. bovis maintenance. Results stress that animal TB is an established wildlife disease without ecological barriers, showing that control measures in place are insufficient to prevent long-distance transmission and spillover across multi-host communities, demanding new interventions targeting livestock-wildlife interactions.


Subject(s)
Animals, Wild , Mycobacterium bovis , Phylogeny , Portugal/epidemiology , Animals , Mycobacterium bovis/genetics , Mycobacterium bovis/classification , Mycobacterium bovis/isolation & purification , Cattle , Animals, Wild/microbiology , Livestock/microbiology , Tuberculosis, Bovine/transmission , Tuberculosis, Bovine/microbiology , Tuberculosis, Bovine/epidemiology , Deer/microbiology , Sus scrofa/microbiology , Tuberculosis/transmission , Tuberculosis/microbiology , Tuberculosis/epidemiology , Tuberculosis/veterinary
6.
Acta Trop ; 254: 107202, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38565332

ABSTRACT

Cervids are highly exposed to ticks, however, their role in the life cycle of these rickettsiae has not been fully elucidated. Given the expanding distribution and growing population of deer species in Portugal, coupled with their direct and indirect interactions with humans during hunting, it becomes crucial to explore their role as sentinels and potential reservoirs of Rickettsia. The present investigation aimed to detect and evaluate exposure to Rickettsia in free-living deer from Portugal. Blood samples (n = 77) were collected from hunted game animals (red deer and fallow deer) from different areas throughout Portugal (Idanha-a-Nova, Monte Fidalgo, Montalvão and Arraiolos) and sera were tested by immunofluorescence assay, to detect antibodies. Additionally, blood DNA samples were screened for SFGR by nested-polymerase chain reaction targeting a fragment of the outer membrane protein B (ompB) gene, as well as for Anaplasma and Ehrlichia spp. targeting the 16S rRNA gene. Thirty-five per cent (25 deer and two fallow deer) tested positive (sera with a titer ≥1:64) for IgG antibodies against Rickettsia conorii. No rickettsial DNA was detected by PCR for the ompB gene, and all DNA samples tested negative for Anaplasma and Ehrlichia. As far as we know, this study is the first screening of cervid species in Portugal for Rickettsia antibodies. The findings suggest that these animals serve as useful sentinel indicators for the circulation of rickettsiae, offering a complementary perspective to studies focused on ticks. The increasing numbers of hunted deer in Portugal and the potential zoonotic features of Rickettsia spp. highlight the importance of continued surveillance directed at tick-borne diseases, especially those involving wild animals.


Subject(s)
Antibodies, Bacterial , Deer , Rickettsia , Animals , Portugal , Deer/microbiology , Antibodies, Bacterial/blood , Rickettsia/isolation & purification , Rickettsia/genetics , Rickettsia/immunology , Rickettsia Infections/veterinary , Rickettsia Infections/epidemiology , Rickettsia Infections/microbiology , Sentinel Species/microbiology , DNA, Bacterial/genetics , Immunoglobulin G/blood , Polymerase Chain Reaction , RNA, Ribosomal, 16S/genetics , Anaplasma/isolation & purification , Anaplasma/genetics , Anaplasma/immunology , Ehrlichia/isolation & purification , Ehrlichia/genetics , Ehrlichia/immunology , Rickettsia conorii/genetics , Rickettsia conorii/isolation & purification , Rickettsia conorii/immunology , Bacterial Outer Membrane Proteins/genetics , Male
7.
PLoS One ; 19(2): e0281006, 2024.
Article in English | MEDLINE | ID: mdl-38358989

ABSTRACT

Wildlife can carry pathogenic organisms, including viruses, bacteria, parasites, and fungi, which can spread to humans and cause mild to serious illnesses and even death. Spreading through animal feces, these pathogens significantly contributes to the global burden of human diseases. Therefore, the present study investigated the prevalence of zoonotic bacterial pathogens, such as Salmonella spp., Escherichia coli, and Shiga toxin-producing E. coli (STEC), in animal feces. Between September 2015 and August 2017, 699 wildlife fecal samples were collected from various agricultural production regions and mountainous areas in South Korea. Fecal samples were collected from wild mammals (85.26%, 596/699) and birds (14.73%, 103/699). Salmonella spp. and E. coli were present in 3% (21/699) and 45.63% (319/699) of the samples, respectively. Moreover, virulence genes stx1 and both stx1 and stx2 were detected in 13.30% (93/699) and 0.72% (5/699) of the samples, respectively. The 21 Salmonella spp. were detected in badgers (n = 5), leopard cats (n = 7), wild boars (n = 2), and magpies (n = 7); STEC was detected in roe deer, water deer, mice, and wild boars. Through phylogenetic and gene-network analyses, the Salmonella spp. isolates (n = 21 laboratory isolates, at least one isolate from each Salmonella-positive animal fecal sample, and n = 6 widely prevalent reference Salmonella serovars) were grouped into two major lineages: S. enterica subsp. enterica and S. enterica subsp. diarizonae. Similarly, 93 E. coli isolates belonged to stx1, including three major lineages (groups 1-3), and stx1 and stx2 detected groups. To the best of our knowledge, this is the first report of a wild leopard cat serving as a reservoir for Salmonella spp. in South Korea. The research findings can help manage the potential risk of wildlife contamination and improve precautionary measures to protect public health.


Subject(s)
Deer , Escherichia coli Infections , Shiga-Toxigenic Escherichia coli , Swine , Animals , Humans , Mice , Animals, Wild/microbiology , Prevalence , Phylogeny , Shiga-Toxigenic Escherichia coli/genetics , Deer/microbiology , Escherichia coli Infections/epidemiology , Escherichia coli Infections/veterinary , Escherichia coli Infections/microbiology , Sus scrofa , Salmonella/genetics , Feces/microbiology
8.
Clin Infect Dis ; 78(3): 637-645, 2024 03 20.
Article in English | MEDLINE | ID: mdl-38207126

ABSTRACT

BACKGROUND: A unique enzootic focus of Mycobacterium bovis in free-ranging deer was identified in northern lower Michigan in 1994, with subsequent evidence of transmission to local cattle herds. Between 2002 and 2017, 3 Michigan deer hunters with M. bovis disease were previously reported. We present 4 additional human cases linked to the zoonotic focus in deer, utilizing genomic epidemiology to confirm close molecular associations among human, deer and cattle M. bovis isolates. METHODS: Identification of human tuberculosis (TB) cases with cultures of M. bovis was provided from the Michigan Department of Health and Human Services (MDHHS) tuberculosis database. Clinical review and interviews focused on risk factors for contact with wildlife and cattle. Whole genome sequences of human isolates were compared with a veterinary library of M. bovis strains to identify those linked to the enzootic focus. RESULTS: Three confirmed and 1 probable human case with M. bovis disease were identified between 2019 and 2022, including cutaneous disease, 2 severe pulmonary disease cases, and human-to-human transmission. The 3 human isolates had 0-3 single-nucleotide polymorphisms (SNPs) with M. bovis strains circulating in wild deer and domestic cattle in Michigan. CONCLUSIONS: Spillover of enzootic M. bovis from deer to humans and cattle continues to occur in Michigan. Future studies should examine the routes of transmission and degree of risk to humans through expanded epidemiological surveys. A One Health approach linking human, veterinary and environmental health should address screening for TB infection, public education, and mitigation of transmission.


Subject(s)
Deer , Mycobacterium bovis , Tuberculosis , Animals , Humans , Cattle , Mycobacterium bovis/genetics , Michigan/epidemiology , Deer/microbiology , Tuberculosis/epidemiology , Tuberculosis/veterinary , Tuberculosis/prevention & control , Animals, Wild
9.
Article in English | WPRIM (Western Pacific) | ID: wpr-1010521

ABSTRACT

LysR-type transcriptional regulators are involved in the regulation of numerous cellular metabolic processes in Klebsiella pneumoniae, leading to severe infection. Earlier, we found a novel LysR family gene, named kp05372, in a strain of K. pneumoniae (designated GPKP) isolated from forest musk deer. To study the function of this gene in relation to the biological characteristics of GPKP, we used the suicide plasmid and conjugative transfer methods to construct deletion mutant strain GPKP-Δkp05372; moreover, we also constructed the GPKP-Δkp05372+ complemented strain. The role of this gene was determined by comparing the following characteristics of three strains: growth curves, biofilm formation, drug resistance, stress resistance, median lethal dose (LD50), organ colonization ability, and the histopathology of GPKP. Real-time polymerase chain reaction (RT-PCR) was used to test the expression level of seven genes upstream of kp05372. There was no significant difference in the growth rates when comparing the three bacterial strains, and no significant difference was recorded at different osmotic pressures, temperatures, salt contents, or hydrogen peroxide concentrations. The GPKP-Δkp05372 mutant formed a weak biofilm, and the other two strains formed medium biofilm. The drug resistance of the GPKP-Δkp05372 mutant toward cephalothin, cotrimoxazole, and polymyxin B was changed. The acid tolerance of the deletion strain was stronger than that of the other two strains. The LD50 values of the wild-type and complemented strains were 174-fold and 77-fold higher than that of the GPKP-Δkp05372 mutant, respectively. The colonization ability of the GPKP-Δkp05372 mutant in the heart, liver, spleen, kidney, and intestine was the weakest. The three strains caused different histopathological changes in the liver and lungs. In the GPKP-Δkp05372 mutant, the relative expression levels of kp05374 and kp05379 were increased to 1.32-fold and 1.42-fold, respectively, while the level of kp05378 was decreased by 42%. Overall, the deletion of kp05372 gene leads to changes in the following: drug resistance and acid tolerance; decreases in virulence, biofilm formation, and colonization ability of GPKP; and regulation of the upstream region of adjacent genes.


Subject(s)
Animals , Female , Male , Mice , Bacterial Proteins/physiology , Biofilms , Deer/microbiology , Drug Resistance, Bacterial , Klebsiella Infections/pathology , Klebsiella pneumoniae/growth & development , Transcription Factors/physiology
10.
Article in Chinese | WPRIM (Western Pacific) | ID: wpr-1008212

ABSTRACT

Musk,with unique and intense perfume,was a kind of deep brown precious medicinal material in traditional Chinese medicine. However,the immature musk in musk pot was white and stench. Given the fact that bacterial diversity generated odorous metabolites in animal hosts,in this study,musk samples at three different mature stages,including MJ( the end of June),MA( the end of August) and MO( the end of October) were harvested from three male forest musk deer,and then next-generation sequencing was used to intensively survey the bacterial communities in musk harvested at different mature stages. RESULTS: indicated that the average OTUs per sample at the end of June,August and October were 47 116. 00 ± 1 567. 24( SE),52 009. 00 ± 8 958. 75( SE) and50 004. 67±4 135. 57( SE),respectively. Feature of the musk 16 S rRNA gene showed a total of 418 genera belonging to 52 phyla were observed in all samples. The main microbiota was bacteria,which accounted for 98. 82%,99. 95% and 99. 58% in MJ,MA and MO,respectively. At phylum level,Firmicutes was the most abundant bacterial of MA( 32. 75%) and MO( 39. 19%). While,the major bacterial in MJ was Proteobacteria( 49. 14%). PICRUSt analysis revealed the functions of bacterial in MJ were mainly involved in secretion,while bacterial functions of MA and MO were mainly involved in amino acid or other substance metabolism,which was in accord with the musk secretion physiological process of forest musk deer. This is the first study involved in the bacterial diversity in musk of forest musk deer across the maturation process,while may provide a new insight into the musk generation mechanism.


Subject(s)
Animals , Male , Deer/microbiology , Fatty Acids, Monounsaturated , Forests , High-Throughput Nucleotide Sequencing
11.
Pesqui. vet. bras ; 37(7): 749-753, jul. 2017. tab, ilus
Article in English | LILACS, VETINDEX | ID: biblio-895483

ABSTRACT

Paratuberculosis is a disease caused by Mycobacterium avium subsp. paratuberculosis (MAP) that affects domestic and wild ruminants. The most common gross lesions are emaciation and corrugation and thickening of the mucosa of the small intestine. Mesenteric lymph nodes might be enlarged. For the present study, 14 red deer and 9 fallow deer from game reserves or venison farms were analyzed. The lesions found correspond to those found by other authors in other geographic locations, except for some differences in histopathological examinations. Among these differences, stands out that intestinal lesions were concentrated mostly in the ileum and granulomas were shown to be more frequent in this section of the intestine than in the corresponding lymph node. Furthermore, in multibacillary lesions the inflammatory infiltrate in the lymph nodes was mainly composed of macrophages. These differences may be due to individual variations of the animals, the stage of disease or a different strain of the pathogen. This study allowed to obtain basic information about the disease and to describe patterns of lesions found in red deer and fallow deer with prediagnosis of clinical paratuberculosis which were not described in the literature before.(AU)


Paratuberculosis é uma doença causada por Mycobacterium avium subsp. paratuberculosis (MAP) que afecta ruminantes selvagens e domésticos. As lesões macroscópicas mais comuns são ondulação e espessamento da mucosa do intestino delgado. Os linfonodos mesentéricos podem aparecer com volume aumentado. Para este estudo, foram analisados 14 veados vermelhos e 9 veados gamo de reservas de caça e fazendas de carne. As lesões encontradas correspondem à encontrada por outros autores em outras localizações geográficas, com exceção de algumas diferenças no exame histopatológico. Entre essas diferenças, sobressai que as lesões intestinais se concentraram principalmente no íleo, os granulomas ocorreram com maior frequência nesta seção do intestino que no seu correspondente linfonodo. Além disso, nas lesões bacterianas, o infiltrado inflamatório linfonodos linfáticos era composta principalmente por macrófagos. Estas diferenças podem ser devidas a variações individuais dos animais, o estádio da doença ou de uma estirpe diferente do agente patogénico. Este estudo permitiu obter informação básica sobre a doença e descrever padrões de lesões encontradas em veados e em gamos com pré-diagnóstico, de paratuberculosis clínica nunca antes descritas na literatura.(AU)


Subject(s)
Animals , Paratuberculosis/diagnosis , Deer/microbiology , Mycobacterium avium/isolation & purification , Chile
12.
Mem. Inst. Oswaldo Cruz ; 106(6): 763-768, Sept. 2011. tab
Article in English | LILACS | ID: lil-602063

ABSTRACT

This work reports a survey of Leptospira spp in pampas deer (Ozotoceros bezoarticus) in the Pantanal wetlands of the state of Mato Grosso do Sul, Brazil by serology and polymerase chain reaction (PCR). Seventy pampas deer were captured in the dry season and surveyed using PCR, microscopic agglutination test (MAT) (n = 51) and by both techniques (n = 47). PCR detected infections in two pampas deer and MAT detected infections in three. Through sequencing and phylogenetic analyses, the PCR-amplified fragment detected in deer was identified as Leptospira interrogans. Serovars Pomona and Butembo were detected using MAT and the highest titre was 200 for serovar Pomona. Epidemiological aspects of the findings are discussed.


Subject(s)
Animals , Female , Male , Antibodies, Bacterial/blood , Deer/microbiology , Leptospira interrogans/isolation & purification , Leptospirosis/veterinary , Agglutination Tests/veterinary , Brazil/epidemiology , Leptospira interrogans serovar pomona/immunology , Leptospira interrogans serovar pomona/isolation & purification , Leptospira interrogans/immunology , Leptospirosis/diagnosis , Leptospirosis/epidemiology , Phylogeny , Polymerase Chain Reaction/veterinary , Seasons , Wetlands
13.
Rev. bras. parasitol. vet ; 19(3): 186-188, July-Sept. 2010. ilus
Article in English | LILACS | ID: lil-604667

ABSTRACT

Epizootiological study of Anaplasma marginale in regions that contain various reservoir hosts, co-existence of rickettsia pathogens, and common vectors is a complicated task. To achieve diagnosis of this rickettsia in cattle and campeiro deer of Brazilian Pantanal, a comparison was made between a real time polymerase chain reaction (RT-PCR) with intercalating Sybr Green fluorochrome and primers based on msp5 gene of A. marginale; a conventional PCR (C-PCR); and parasitological examination using thin blood smear stained with Giemsa-MayGrunwald. Both PCRs showed good performance in the diagnosis of A. marginale in cattle, and were superior to the parasitological exam. The RT-PCR detected seven positive campeiro deer (16.3 percent). This rate was significantly higher compared to C-PCR, which identified one animal as positive (2.3 percent), and also compared to parasitological diagnosis, which did not find any positive animals. The dissociation temperature average of positive reactions in cattle (81.72 ºC ± 0.20) was identical to dissociation temperature found in the cervids (81.72 ºC ± 0.12), suggesting that both animal species were infected with A. marginale. We concluded that RT-PCR can be used for A. marginale diagnosis and in epizootiological studies of cattle and cervids; in spite of the small number of campeiro deer samples, the results indicated that this wildlife species has importance in the Anaplasma epizootiology in the Brazilian Pantanal.


O estudo epizootiológico de Anaplasma marginale em regiões que existem vários reservatórios, co-existência de espécies de riquétsias patógenas e vetores comuns é uma tarefa complicada. Com o objetivo de obter o diagnóstico dessa riquétsia em bovinos e veado campeiro do Pantanal brasileiro foi avaliada uma reação da polimerase em cadeia em tempo real (PCR-TR) com o fluoróforo intercalante de fita dupla de DNA Sybr Green e iniciadores baseados na seqüência do gene msp5 de A. marginale comparando-a a uma PCR convencional (PCR-C) e ao exame parasitológico de esfregaço fino de sangue corado com Giemsa-MayGrunwald. Ambas PCRs apresentaram bom desempenho no diagnóstico de A. marginale nos bovinos, o qual foi superior ao exame parasitológico. O PCR-TR detectou sete veados campeiros positivos (16,3 por cento), o que foi significativamente maior comparado ao PCR-C identificando um animal como positivo (2,3 por cento), e ao exame parasitológico não encontrou nenhum animal positivo. A média da temperatura de dissociação das reações positivas para amostras de bovinos (81,72 ºC ± 0,20) foi idêntica àquelas dos cervídeos ( 81,72 ºC ± 0,12), o que sugere que ambas espécies animais foram infectadas por A. marginale. Concluímos que PCR-TR pode ser utilizada para diagnóstico e estudos epizootiológicos de A. marginale em bovinos e cervídeos. Apesar da pequena amostragem de veado campeiro os resultados indicam que essa espécie de animal selvagem tem importância na epizootiologia do Anaplasma no Pantanal brasileiro.


Subject(s)
Animals , Cattle , Anaplasma marginale/isolation & purification , Anaplasmosis/diagnosis , Anaplasmosis/microbiology , Cattle Diseases/diagnosis , Cattle Diseases/microbiology , Deer/microbiology , Polymerase Chain Reaction , Anaplasma marginale/genetics , Brazil , Polymerase Chain Reaction/methods , Time Factors
14.
Article in English | WPRIM (Western Pacific) | ID: wpr-22478

ABSTRACT

A case of tuberculosis is reported in an eight-year-old, male, elk (Cervus elaphus nelsoni). The elk showed severe coughing, respiratory distress, abdominal breathing, anorexia, and severe progressive emaciation in the elk farm. At necropsy, the elk appeared in poor body condition. Mild enlargement of retropharyngeal and submandibular lymph node was observed in the head. Diffuse fibrinous pleuritis and purple red lobar pneumonia were found in the thorax. Well demarcated numerous dark yellow discrete or confluent nodules from 0.3 to 2 cm in diameter were scattered in the whole lung. Bronchial and mediastinal lymph nodes were also enlarged. Histopathologically, lungs had typical classical tuberculous granulomas, multiple abscesses, and numerous macrophages and Langhans giant cells infiltration in alveolar lumen. In the lymph nodes, there were small clusters of necrosis and infiltration of numerous macrophages, epithelioid cells, and Langhans giant cells. With the acid-fast staining, numerous mycobacteria were revealed in the lung and lymph nodes. According to this study, there are differences of the histopathologic lesions and the numbers of acid-fast bacilli in the lesions between this elk and cattle. Mycobacterium bovis was confirmed as a causative agent in this elk using bacterial isolation, biochemical characteristics, and PCR technique. The isolate was negative for niacin test, nitrate reductase, and pyrazinamidase. This is a first report for bovine tuberculosis of farmed elk in Asia.


Subject(s)
Animals , Male , DNA, Bacterial/chemistry , Deer/microbiology , Fatal Outcome , Korea , Lung/microbiology , Mycobacterium bovis/genetics , Polymerase Chain Reaction , Tuberculosis/microbiology
15.
Acta bioquím. clín. latinoam ; 35(4): 531-540, dic. 2001. ilus, tab
Article in Spanish | BINACIS | ID: bin-8788

ABSTRACT

El desarrollo de la tecnología del P.C.R. y RFLP constituyen metodologías adecuadas para la identificación y tipificación del Mycobacterium avium subsp. paratuberculosis (Mtpbc), microorganismo que produce paratuberculosis animal y que está relacionado a la Enfermedad de Crohn en humanos. Los objetivos del presente trabajo fueron: 1) Aislar cepas de Mptbc a partir de materia fecal y órganos e identificar M. paratuberculosis. 2) Establecer mediante R.F.L.P. el patrón genético de las cepas aisladas. 3) Analizar las proteínas celulares y extracelulares expresadas en Mptbc. Se cultivó materia fecal y órganos de ciervos en los medios Herrold yema-huevo, con y sin el agregado de mycobactina, adicionando piruvato y antibióticos, para el aislamiento de Mptbc. Las cepas aisladas fueron identificadas por P.C.R., y analizadas por R.F.L.P., e Inmunoblotting (IB). Se aislaron 12 cepas de Mptbc, 6 de materia fecal y 6 a partir de los órganos. Las cepas aisladas se desarrollaron únicamente en el medio Herrold con mycobactina evidenciando su dependencia característica. El análisis por P.C.R. realizado a partir de cepas desarrolladas en el medio de cultivo resultó positivo. Los aislamientos revelaron idéntico patrón genético de R.F.L.P. del tipo "A", con la sonda de 217 pares de bases (endonucleasa BstE II y Pst I). Con el inmunoblotting se detectaron antígenos proteicos de 65 KDa (shock térmico), 42 KDa, 35 KDa y 28 KDa, correspondientes a Mptbc de un animal con sintomatología clínica y lesiones histológicas características en órganos. Se identificó un único patrón genético "A", en la población estudiada; se amplificó la secuencia IS900 específica de Mptbc. y se identificaron las proteínas excretadas y contenidas en el soma bacteriano, pero para aumentar la sensibilidad de las pruebas inmunológicas se considera necesario caracterizar mejor los antígenos específicos de Mptbc (AU)


Subject(s)
In Vitro Techniques , Animals , Deer/microbiology , Mycobacterium avium subsp. paratuberculosis/isolation & purification , Mycobacterium avium subsp. paratuberculosis/classification , Mycobacterium avium subsp. paratuberculosis/genetics , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , Bacterial Proteins , Mycobacterium avium/isolation & purification , Mycobacterium avium/classification , Food Contamination , Milk/microbiology , Enzyme-Linked Immunosorbent Assay
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