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1.
Plant J ; 27(5): 383-91, 2001 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-11576423

RESUMO

Two hairpin-loop domains in cystatin family proteinase inhibitors form an interface surface region that slots into the active site cleft of papain-like cysteine proteinases, and determine binding affinity. The slot region surface architecture of the soybean cysteine proteinase inhibitor (soyacystatin N, scN) was engineered using techniques of in vitro molecular evolution to define residues that facilitate interaction with the proteinase cleft and modulate inhibitor affinity and function. Combinatorial phage display libraries of scN variants that contain mutations in the essential motifs of the first (QVVAG) and second (EW) hairpin-loop regions were constructed. Approximately 1010-1011 phages expressing recombinant scN proteins were subjected to biopanning selection based on binding affinity to immobilized papain. The QVVAG motif in the first hairpin loop was invariant in all functional scN proteins. All selected variants (30) had W79 in the second hairpin-loop motif, but there was diversity for hydrophobic and basic amino acids in residue 78. Kinetic analysis of isolated scN variants identified a novel scN isoform scN(LW) with higher papain affinity than the wild-type molecule. The variant contained an E78L substitution and had a twofold lower Ki (2.1 pM) than parental scN, due to its increased association rate constant (2.6 +/- 0.09 x 107 M-1sec-1). These results define residues in the first and second hairpin-loop regions which are essential for optimal interaction between phytocystatins and papain, a prototypical cysteine proteinase. Furthermore, the isolated variants are a biochemical platform for further integration of mutations to optimize cystatin affinity for specific biological targets.


Assuntos
Cistatinas/metabolismo , Inibidores de Cisteína Proteinase/metabolismo , Papaína/antagonistas & inibidores , Sequência de Bases , Cistatinas/genética , Inibidores de Cisteína Proteinase/genética , Evolução Molecular Direcionada , Variação Genética , Dados de Sequência Molecular , Mutagênese , Mutação , Biblioteca de Peptídeos , Estrutura Secundária de Proteína , Proteínas Recombinantes/metabolismo , Proteínas de Soja
2.
Biol Chem ; 382(1): 97-107, 2001 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-11258679

RESUMO

Within the cystatin superfamily, only kininogen domain 2 (KD2) is able to inhibit mu- and m-calpain. In an attempt to elucidate the structural requirements of cystatins for calpain inhibition, we constructed recombinant hybrids of human stefin B (an intracellular family 1 cystatin) with KD2 and deltaL110 deletion mutants of chicken cystatin-KD2 hybrids. Substitution of the N-terminal contact region of stefin B by the corresponding KD2 sequence resulted in a calpain inhibitor of Ki = 188 nM. Deletion of L110, which forms a beta-bulge in family 1 and 2 cystatins but is lacking in KD2, improved inhibition of mu-calpain 4- to 8-fold. All engineered cystatins were temporary inhibitors of calpain due to slow substrate-like cleavage of a single peptide bond corresponding to Gly9-Ala10 in chicken cystatin. Biomolecular interaction analysis revealed that, unlike calpastatin, the cystatin-type inhibitors do not bind to the calmodulin-like domain of the small subunit of calpain, and their interaction with the mu-calpain heterodimer is completely prevented by a synthetic peptide comprising subdomain B of calpastatin domain 1. Based on these results we propose that (i) cystatin-type calpain inhibitors interact with the active site of the catalytic domain of calpain in a similar cystatin-like mode as with papain and (ii) the potential for calpain inhibition is due to specific subsites within the papain-binding regions of the general cystatin fold.


Assuntos
Calpaína/antagonistas & inibidores , Domínio Catalítico/genética , Galinhas/metabolismo , Cistatinas/genética , Inibidores de Cisteína Proteinase/genética , Cininogênios/genética , Sequência de Aminoácidos , Animais , Sequência de Bases , Calpaína/genética , Calpaína/metabolismo , Catálise , Clonagem Molecular , Cistatina B , Cistatinas/isolamento & purificação , Eletroforese em Gel de Poliacrilamida , Eritrócitos/química , Humanos , Espectrometria de Massas , Dados de Sequência Molecular , Mutagênese , Proteínas Recombinantes de Fusão/biossíntese , Proteínas Recombinantes de Fusão/genética , Proteínas Recombinantes de Fusão/isolamento & purificação , Reação em Cadeia da Polimerase Via Transcriptase Reversa
3.
Biol Chem ; 382(12): 1733-7, 2001 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-11843187

RESUMO

Heterodimeric p-calpain, consisting of the large (80 kDa) and the small (30 kDa) subunit, was isolated and purified from human erythrocytes by a highly reproducible four-step purification procedure. Obtained material is more than 95% pure and has a specific activity of 6-7 mU/mg. Presence of contaminating proteins could not be detected by HPLC and sequence analysis. During storage at -80 degrees C the enzyme remains fully activatable by Ca2+, although the small subunit is partially processed to a 22 kDa fragment. This novel autolysis product of the small subunit starts with the sequence 60RILG and is further processed to the known 18 kDa fragment. Active forms and typical transient and stable autolysis products of the large subunit were identified by protein sequencing. In casein-zymograms only the activatable forms 80 kDa+30 kDa, 80 kDa+22 kDa and 80 kDa+18 kDa displayed caseinolysis.


Assuntos
Calpaína/isolamento & purificação , Eritrócitos/química , Autólise/metabolismo , Calpaína/sangue , Cromatografia de Afinidade , Cromatografia em Gel , Cromatografia por Troca Iônica , Eletroforese em Gel de Poliacrilamida , Fluorometria , Humanos , Análise de Sequência de Proteína
4.
FEBS Lett ; 482(1-2): 91-6, 2000 Sep 29.
Artigo em Inglês | MEDLINE | ID: mdl-11018529

RESUMO

Extracellular cysteine proteases, in particular cathepsin B, have been implicated in a variety of pathological processes. Selectively targeting labels of this enzyme are important tools to gain more detailed understanding of its specific roles. Starting from our recently developed irreversible epoxysuccinyl-based inhibitor (R-Gly-Gly-Leu-(2S,3S)-tEps-Leu-Pro-OH, R=OMe), we have synthesized two affinity labels, R=NH-(CH(2))(6)-NH-rhodamine B and R=NH-(CH(2))(6)-NH-biotin. Using MCF-7 cells, the labeled inhibitors were shown to be virtually non-cell-permeant. Moreover, affinity blot analysis with the biotinylated inhibitor allowed a highly sensitive and selective non-radioactive detection of active cathepsin B.


Assuntos
Marcadores de Afinidade/síntese química , Biotina/análogos & derivados , Catepsina B/química , Catepsina B/metabolismo , Endopeptidases , Oligopeptídeos/síntese química , Rodaminas/síntese química , Marcadores de Afinidade/química , Biotina/síntese química , Biotina/química , Biotina/farmacologia , Catepsina L , Catepsinas/química , Catepsinas/metabolismo , Cisteína Endopeptidases , Humanos , Indicadores e Reagentes , Cinética , Estrutura Molecular , Oligopeptídeos/química , Oligopeptídeos/farmacologia , Rodaminas/química , Rodaminas/farmacologia
5.
J Biol Chem ; 275(43): 33562-6, 2000 Oct 27.
Artigo em Inglês | MEDLINE | ID: mdl-10913110

RESUMO

Cancer invasion and metastasis is a process requiring a coordinated series of (anti-)adhesive, migratory, and pericellular proteolytic events involving various proteases such as urokinase-type plasminogen activator (uPA)/plasmin, cathepsins B and L, and matrix metalloproteases. Novel types of double-headed inhibitors directed to different tumor-associated proteolytic systems were generated by substitution of a loop in chicken cystatin, which is nonessential for cysteine protease inhibition, with uPA-derived peptides covering the human uPA receptor binding sequence uPA-(19-31). The inhibition constants of these hybrids toward cysteine proteases are similar to those of wild-type cystatin (K(i), papain (pm), 1.9-2.4; K(i), cathepsin B (nm), 1.0-1.7; K(i), cathepsin L (pm), 0.12-0.61). FACS analyses revealed that the hybrids compete for binding of uPA to the cell surface-associated uPA receptor (uPAR) expressed on human U937 cells. The simultaneous interaction of the hybrid molecules with papain and uPAR was analyzed by surface plasmon resonance. The measured K(D) value of a papain-bound cystatin variant harboring the uPAR binding sequence of uPA (chCys-uPA-(19-31)) and soluble uPAR was 17 nm (K(D) value for uPA/uPAR interaction, 5 nm). These results indicate that cystatins with a uPAR binding site are efficient inhibitors of cysteine proteases and uPA/uPAR interaction at the same time. Therefore, these compact and small bifunctional inhibitors may represent promising agents for the therapy of solid tumors.


Assuntos
Cistatinas/metabolismo , Inibidores de Cisteína Proteinase/metabolismo , Receptores de Superfície Celular/metabolismo , Sequência de Aminoácidos , Sítios de Ligação , Clonagem Molecular , Cistatinas/química , Relação Dose-Resposta a Droga , Humanos , Dados de Sequência Molecular , Papaína/metabolismo , Receptores de Ativador de Plasminogênio Tipo Uroquinase , Proteínas Recombinantes/metabolismo , Relação Estrutura-Atividade
6.
Bioorg Med Chem Lett ; 10(7): 677-80, 2000 Apr 03.
Artigo em Inglês | MEDLINE | ID: mdl-10762052

RESUMO

Beta-cyclodextrin is known to form inclusion complexes with hydrophobic drugs. Several tumor cell lines are known to secrete and/or contain membrane-associated cathepsin B which is possibly involved in invasion and metastasis. Based on these information, our recently developed endo-epoxysuccinyl peptide inhibitor MeO-Gly-Gly-Leu-(2S,3S)-tEps-Leu-Pro-OH for cathepsin B was conjugated with beta-cyclodextrin to obtain a site-directed drug carrier system. Furthermore, the conjugate, was shown to form an inclusion complex with the cytotoxic drug methotrexate.


Assuntos
Ciclodextrinas/farmacologia , Portadores de Fármacos/síntese química , Compostos de Epóxi/farmacologia , Peptídeos/farmacologia , beta-Ciclodextrinas , Antimetabólitos Antineoplásicos/farmacologia , Ciclodextrinas/síntese química , Portadores de Fármacos/química , Portadores de Fármacos/metabolismo , Sistemas de Liberação de Medicamentos , Compostos de Epóxi/síntese química , Humanos , Corpos de Inclusão/metabolismo , Metotrexato/farmacologia , Peptídeos/síntese química , Células Tumorais Cultivadas
7.
Biochem J ; 340 ( Pt 1): 227-35, 1999 May 15.
Artigo em Inglês | MEDLINE | ID: mdl-10229679

RESUMO

In the presence of ATP, genistein, like the ATP analogue adenosine 5'-[beta,gamma-imido]triphosphate (pp[NH]pA), increases cystic fibrosis transmembrane conductance regulator (CFTR) chloride currents by prolonging open times. As pp[NH]pA is thought to increase CFTR currents by interfering with ATP hydrolysis at the second nucleotide-binding fold (NBF-2), the present study was undertaken to investigate the effects of genistein on a fusion protein comprising maltose-binding protein (MBP) and NBF-2 (MBP-NBF-2). MBP-NBF-2 exhibited ATPase, GTPase and adenylate kinase activities that were inhibited by genistein in a partial non-competitive manner with respect to ATP or GTP. Ki values for competitive and uncompetitive inhibition were respectively 20 microM and 63 microM for ATPase, 15 microM and 54 microM for GTPase, and 46 microM and 142 microM for adenylate kinase. For ATPase activity, genistein reduced Vmax by 29% and Vmax/Km by 77%. Additional evidence for complex-formation between genistein and MBP-NBF-2 was obtained by the detection of genistein-dependent alterations in the CD spectrum of MBP-NBF-2 that were consistent with the formation of a higher-ordered state. Addition of MBP-NBF-2 increased the fluorescence intensity of genistein, consistent with a change to a less polar environment. pp[NH]pA partially eliminated this enhanced fluorescence of genistein. These observations provide the first direct biochemical evidence that genistein interacts with CFTR, thus inhibiting NBF-2 activity, and suggest a similar mechanism for genistein-dependent stimulation of CFTR chloride currents.


Assuntos
Adenosina Trifosfatases/antagonistas & inibidores , Adenilato Quinase/antagonistas & inibidores , Regulador de Condutância Transmembrana em Fibrose Cística/metabolismo , GTP Fosfo-Hidrolases/antagonistas & inibidores , Genisteína/farmacologia , Nucleotídeos/metabolismo , Adenosina Trifosfatases/química , Adenosina Trifosfatases/metabolismo , Adenilato Quinase/química , Adenilato Quinase/metabolismo , Adenilil Imidodifosfato/metabolismo , Sítios de Ligação/efeitos dos fármacos , Catálise/efeitos dos fármacos , Domínio Catalítico/efeitos dos fármacos , Dicroísmo Circular , Regulador de Condutância Transmembrana em Fibrose Cística/antagonistas & inibidores , Regulador de Condutância Transmembrana em Fibrose Cística/química , Dimetil Sulfóxido/farmacologia , GTP Fosfo-Hidrolases/química , GTP Fosfo-Hidrolases/metabolismo , Genisteína/química , Genisteína/metabolismo , Guanosina Trifosfato/metabolismo , Humanos , Isoflavonas/farmacologia , Cinética , Quercetina/farmacologia , Proteínas Recombinantes de Fusão/antagonistas & inibidores , Proteínas Recombinantes de Fusão/química , Proteínas Recombinantes de Fusão/metabolismo , Solubilidade/efeitos dos fármacos , Solventes/farmacologia , Espectrometria de Fluorescência
8.
FEBS Lett ; 421(1): 80-2, 1998 Jan 02.
Artigo em Inglês | MEDLINE | ID: mdl-9462845

RESUMO

Based on recent information about the anti-substrate binding mode of the propeptide portion of procathepsin B and the well established substrate-like binding of epoxysuccinyl-dipeptide carboxylates to the S' subsites of cathepsin B a new endo-trans-epoxysuccinyl peptide was synthesized that contains the dipeptide moiety Leu-Pro-OH for the P1'-P2' substrate positions and the tripeptide moiety Leu-Gly-Gly-OMe (sequence portion 46-48 of the propeptide) for the P2-P4 positions in anti-substrate orientation. With an unequivocal (2S,3S) configuration this new trans-epoxysuccinyl peptide derivative was found to inhibit cathepsin B with an apparent second-order rate constant of 1,520,000 M(-1) s(-1) which represents so far the most potent inhibitor among E-64-derived compounds. Conversely, the (2R,3R) diastereomer exhibited a significantly lower inhibition potency. This observation fully agrees with our previous findings that inhibitor/enzyme interactions at the S subsites are favored by the (2S,3S) and reverse interactions at the S' subsites by the (2R,3R) configuration of the trans-epoxysuccinyl moiety.


Assuntos
Catepsina B/antagonistas & inibidores , Endopeptidases , Oligopeptídeos/farmacologia , Inibidores de Proteases/farmacologia , Catepsina L , Catepsinas/antagonistas & inibidores , Cisteína Endopeptidases , Humanos , Cinética , Oligopeptídeos/síntese química , Papaína/antagonistas & inibidores
9.
Bioorg Med Chem ; 5(9): 1789-97, 1997 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-9354234

RESUMO

A series of trans-epoxysuccinyl-peptide derivatives based on the natural inhibitor E-64 were synthesized in the (2R,3R) and (2S,3S) configuration in order to analyze the role of the stereochemistry of this residue in dictating inhibitory potency and selectivity for cysteine proteases. We confirmed that binding of E-64 like trans-epoxysuccinyl compounds is remarkably favored by the (2S,3S) configuration, but we also found that CA030-type compounds are stronger inhibitors in the (2R,3R) configuration than the related diastereomers. Consequently, the structural requirements for exploiting both the S and S' subsites are not additive and a structure-based design of bis-peptidyl derivatives of trans-epoxysuccinic acid to increase selective inhibition becomes even more difficult. Additional contrasting effects were observed for the pH optima required in the electrostatic interactions at the S and S' subsites.


Assuntos
Catepsina B/antagonistas & inibidores , Inibidores de Cisteína Proteinase/farmacologia , Leucina/análogos & derivados , Cristalografia por Raios X , Inibidores de Cisteína Proteinase/química , Humanos , Concentração de Íons de Hidrogênio , Cinética , Leucina/química , Leucina/farmacologia , Espectroscopia de Ressonância Magnética , Estrutura Molecular , Sais , Espectrometria de Massas de Bombardeamento Rápido de Átomos , Estereoisomerismo
10.
FEBS Lett ; 410(2-3): 180-6, 1997 Jun 30.
Artigo em Inglês | MEDLINE | ID: mdl-9237625

RESUMO

CFTR-NBF-2 expressed and purified in fusion with the maltose-binding protein was shown to catalyse the reaction ATP-->ADP+Pi by three different assays, monitoring ATP turnover, formation of ADP and release of Pi (Km 86 microM, rate constant 0.37 min(-1)). The reaction product ADP inhibits this ATPase activity. In a similar manner the hydrolysis of GTP to GDP and Pi was demonstrated (Km 40 microM, rate constant 0.29 min(-1)). In the presence of AMP the ATPase reaction was superseded by the formation of two ADP from ATP and AMP. As typical for adenylate kinases a distinct AMP-binding site could be verified for CFTR-NBF-2 by the inability of TNP-ATP and AMP to compete for binding. All three enzymatic activities were inhibited by the symmetric double-substrate-mimicking inhibitor Ap5A. As NBF-2 plays a central role in CFTR channel opening and closing the results reported here are fundamental in understanding mechanisms of CFTR channel activity regulation.


Assuntos
Adenosina Trifosfatases/metabolismo , Adenilato Quinase/metabolismo , Regulador de Condutância Transmembrana em Fibrose Cística/metabolismo , GTP Fosfo-Hidrolases/metabolismo , Peptídeos/metabolismo , Difosfato de Adenosina/metabolismo , Monofosfato de Adenosina/metabolismo , Adenosina Trifosfatases/antagonistas & inibidores , Trifosfato de Adenosina/metabolismo , Adenilato Quinase/antagonistas & inibidores , Regulador de Condutância Transmembrana em Fibrose Cística/química , Regulador de Condutância Transmembrana em Fibrose Cística/genética , Regulador de Condutância Transmembrana em Fibrose Cística/isolamento & purificação , Fosfatos de Dinucleosídeos/farmacologia , Inibidores Enzimáticos , GTP Fosfo-Hidrolases/antagonistas & inibidores , Guanosina Trifosfato/metabolismo , Peptídeos/química , Peptídeos/genética , Peptídeos/isolamento & purificação , Proteínas Recombinantes de Fusão/química , Proteínas Recombinantes de Fusão/genética , Proteínas Recombinantes de Fusão/isolamento & purificação , Proteínas Recombinantes de Fusão/metabolismo
11.
FEBS Lett ; 398(1): 97-100, 1996 Nov 25.
Artigo em Inglês | MEDLINE | ID: mdl-8946960

RESUMO

Association reactions of a recombinant CFTR-NBF-2 polypeptide fused to glutathione S-transferase with guanine nucleotides were monitored quantitatively by recording the fluorescence enhancement of excited trinitrophenol (TNP)-labelled GTP after binding to NBF-2. Binding of TNP-GTP to the recombinant NBF-2 polypeptide was characterized by a Kd value of 3.9 microM. The corrected Kd values for unlabelled guanine nucleotides were determined to be 33 microM for GTP, 92 microM for GDP and 217 microM for GMP. TNP-ATP bound to NBF-2 was competitively displaced by GTP indicating a common binding site for both nucleotides. The recombinant NBF-2 did not show an intrinsic GTPase activity above a detection limit of 0.007 min(-1). Our findings provide the first experimental evidence that NBF-2 can act as a GTP-binding subunit that would favor the release of GDP after GTP hydrolysis.


Assuntos
Regulador de Condutância Transmembrana em Fibrose Cística/metabolismo , Guanosina Trifosfato/metabolismo , Fragmentos de Peptídeos/metabolismo , Proteínas Recombinantes de Fusão/metabolismo , Trifosfato de Adenosina/metabolismo , Sítios de Ligação , Regulador de Condutância Transmembrana em Fibrose Cística/genética , Citoplasma/metabolismo , Fluorescência , GTP Fosfo-Hidrolases/metabolismo , Guanina/metabolismo , Guanosina Difosfato/metabolismo , Guanosina Monofosfato/metabolismo , Fragmentos de Peptídeos/genética , Proteínas Recombinantes de Fusão/genética
12.
FEBS Lett ; 391(3): 297-301, 1996 Aug 12.
Artigo em Inglês | MEDLINE | ID: mdl-8764993

RESUMO

Mono(6-succinylamido-6-deoxy)-beta-cyclodextrin was synthesized by classical carbohydrate chemistry and used as a template mono-functionalized with the linear, fully flexible 4C-spacer carboxylate for covalent linkage of the calpain inhibitor leucyl-leucyl-norleucinal. Spectroscopic analyses of the conjugate do not support a self-inclusion of part of the hydrophobic peptide tail, but confirm its intra- or intermolecular interaction with the template moiety that leads to full water solubility. The inhibitory potency of the beta-cyclodextrin/peptide aldehyde construct was compared with that of the parent Ac-Leu-Leu-Nle-H against cathepsin B and calpain. Despite the large size of the template the inhibition of cathepsin B was only slightly reduced in full agreement with the X-ray structure of this enzyme which shows full accessibility of the S-subsites. For this enzyme the 4C-spacer is apparently sufficient to guarantee optimal interaction of the peptide tail with the binding cleft. Conversely, for mu-calpain a significantly decreased inhibitory potency was obtained with the conjugate suggesting steric interference of the template in the binding process. These results show that the beneficial properties of the cyclodextrin template can be retained in conjugates with bioactive peptides if attention is paid to optimize in each case the size and nature of the spacer for optimal recognition of the grafted biomolecule.


Assuntos
Calpaína/antagonistas & inibidores , Ciclodextrinas/metabolismo , Inibidores de Cisteína Proteinase/farmacologia , Leupeptinas/farmacologia , beta-Ciclodextrinas , Sequência de Carboidratos , Dicroísmo Circular , Cinética , Dados de Sequência Molecular
13.
Eur J Biochem ; 235(3): 534-42, 1996 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-8654398

RESUMO

Chicken cystatin and human kininogen domain 2 are members of the cystatin superfamily of protein-type cysteine proteinase inhibitors. They show structural and functional similarities, but only human kininogen domain 2 inhibits calpain. Using recombinant chicken cystatin as a scaffold for hybrid cassette analysis, the known reactive-site regions (N-terminus, first hairpin loop and second hairpin loop) were substituted by the corresponding sequences of human kininogen domain 2 in a single and combined manner. Seven hybrids were expressed, purified to homogeneity, characterized protein-chemically, and their inhibition of papain, actinidin, human cathepsin B, human cathepsin L and calpain (80-kDa subunit of rabbit skeletal muscle calpain II and porcine erthrocyte calpain 1) was determined. Strong but temporary inhibition of calpain by chicken cystatin hybrids carrying the N-terminus alone (variant sc1-KD2) or the N-terminus together with the first hairpin loop (variant sc1/2-KD2) was observed; hybrids of the second hairpin loop (sc3-KD2, sc1/3-KD2, sc2/3-KD2, sc1/2/3-KD2) were less strong calpain inhibitors. These data indicate that the inhibiton of calpain by human kininogen domain 2 requires the correct conformation and combination of several contact sites, and suggest that the N-terminus and the first hairpin loop play a major role in this ensemble. Remarkably, hybrid sc2-KD2 exhibited 5 or 150 times stronger inhibition of actinidin compared to native chicken cystatin or to proteolytically isolated human kininogen domain 2, respectively. This indicates an important role of the first hairpin loop of cystatins in the interaction with actinidin. Along with the impaired inhibition of cathepsin L, papain, actinidin, cathepsin B and calpain by the hybrids sc1/3-KD2, sc2/3-KD2 and sc1/2/3-KD2, these results support our hypothesis that all three predicted contact regions of kininogen domain 2 contribute to binding in the active-site clefts of papain-like enzymes in a finely balanced manner.


Assuntos
Cistatinas/química , Endopeptidases , Inibidores Enzimáticos/farmacologia , Cininogênios/química , Sequência de Aminoácidos , Animais , Sequência de Bases , Calpaína/antagonistas & inibidores , Catepsina B/antagonistas & inibidores , Catepsina L , Catepsinas/antagonistas & inibidores , Galinhas , Cisteína Endopeptidases/efeitos dos fármacos , Inibidores Enzimáticos/química , Humanos , Dados de Sequência Molecular , Oligodesoxirribonucleotídeos , Papaína/antagonistas & inibidores , Homologia de Sequência de Aminoácidos
14.
FEBS Lett ; 363(1-2): 189-94, 1995 Apr 17.
Artigo em Inglês | MEDLINE | ID: mdl-7537226

RESUMO

CFTR-NBF-2 was expressed in Escherichia coli in fusion with glutathione-S-transferase, the soluble portion was purified and identified as a structured protein by its CD spectrum. Association reactions of the recombinant NBF-2 with adenine nucleotides were monitored qualitatively by demonstrating its ability to bind specifically to ATP-, ADP- and AMP-affinity agarose and quantitatively by recording the fluorescence enhancement of excited trinitrophenol (TNP)-labelled adenine nucleotides occurring as a result of binding to NBF-2. Best-fit monophasic binding curves to the fluorescence data indicated Kd values of 22 microM for TNP-ATP, 39 microM for TNP- ADP and 2.1 microM for TNP-AMP. The corrected Kd values for unlabelled adenine nucleotides competing with the fluorophores were determined to be 37 microM for ATP, 92 microM for ADP and 12 microM for AMP. The recombinant NBF-2 did not show any hydrolytic activity on ATP (detection limit 0.001 s-1). Our findings support the concept of a central role of NBF-2 in CFTR activity regulation acting as an allosteric switch between channel opening and closing and give the first experimental evidence that the channel inhibitor AMP could act via NBF-2.


Assuntos
Glutationa Transferase/química , Proteínas de Membrana/química , Nucleotídeos/metabolismo , Proteínas Recombinantes de Fusão/química , Difosfato de Adenosina/metabolismo , Monofosfato de Adenosina/metabolismo , Trifosfato de Adenosina/metabolismo , Sequência de Bases , Sítios de Ligação , Regulador de Condutância Transmembrana em Fibrose Cística , Escherichia coli/genética , Expressão Gênica , Glutationa Transferase/genética , Glutationa Transferase/metabolismo , Hidrólise , Proteínas de Membrana/genética , Proteínas de Membrana/metabolismo , Dados de Sequência Molecular , Dobramento de Proteína , Proteínas Recombinantes de Fusão/metabolismo , Sefarose , Trinitrobenzenos
15.
FEBS Lett ; 361(2-3): 185-90, 1995 Mar 20.
Artigo em Inglês | MEDLINE | ID: mdl-7698320

RESUMO

Temporary inhibition of the cysteine proteinases papain and cathepsin L was observed with several hairpin loop mutants of recombinant chicken cystatin at enzyme concentrations above nanomolar. Kinetic modelling of inhibition data, gel electrophoresis and amino acid sequencing revealed that reappearance of papain activity is due to selective cleavage of the Gly(9)-Ala10 bond in the N-terminal binding area of the chicken cystatin variants, resulting in truncated inhibitors of lower affinity. Cleavage of the same bond by contaminating papaya proteinase IV was ruled out by previous purification of papain and suitable control experiments. According to the proposed kinetic model, cleavage occurs within the enzyme-inhibitor complex with first order rate constants ktemp of 2.3 x 10(-3) up to 5 x 10(-1) s-1. A similar ktemp/Km ratio was found for all mutants (0.7 x 10(6)-2.1 x 10(6) s-1.M-1); it is almost identical with the kcat/Km ratio of the peptide substrate Z-Phe-Arg-NHMec. These results suggest that distorted contacts of one of the hairpin loops affect binding of the N-terminal contact area in a way that covalent interaction of the Gly(9)-Ala10 bond with the active-site Cys residue of papain can occur and the bond is cleaved in a substrate-like manner.


Assuntos
Alanina , Cistatinas/química , Cistatinas/farmacologia , Glicina , Papaína/antagonistas & inibidores , Sequência de Aminoácidos , Animais , Sítios de Ligação , Galinhas , Cistatinas/biossíntese , Cinética , Modelos Teóricos , Dados de Sequência Molecular , Mutagênese Insercional , Papaína/isolamento & purificação , Proteínas Recombinantes/biossíntese , Proteínas Recombinantes/química , Proteínas Recombinantes/farmacologia , Especificidade por Substrato
16.
FEBS Lett ; 361(2-3): 179-84, 1995 Mar 20.
Artigo em Inglês | MEDLINE | ID: mdl-7698319

RESUMO

Five recombinant hairpin loop variants of chicken cystatin (delta V55, delta V55-S56, delta P103-L105, delta I102-Q107, loop2-KD2) were constructed by cassette mutagenesis, expressed in E. coli, purified to homogeneity, characterized by protein-chemical means and by their inhibitory properties. The variant forms, modified in two of the three postulated cysteine proteinase binding regions, were inhibitorily active. However, the equilibrium dissociation constants of the complexes between papain as well as human cathepsin B or L and the cystatin variants show a weaker affinity for all three enzymes compared with recombinant chicken cystatin. These results prove the contribution of both hairpin loops to complex formation with the three enzymes. Furthermore, the kinetic constants indicate discrete differences in the molecular mechanism of interaction between chicken cystatin and papain, cathepsin B, and cathepsin L. Inhibition of cathepsin L was much less affected than inhibition of papain or cathepsin B by the modifications achieved in the five variants. Remarkably, at high enzyme concentration (above 0.5 nM) inhibition of papain by these variants was 'temporary', that means, active papain was released from the enzyme-inhibitor complex within minutes to hours (compare [1]).


Assuntos
Catepsina B/antagonistas & inibidores , Catepsinas/antagonistas & inibidores , Cistatinas/química , Cistatinas/farmacologia , Endopeptidases , Papaína/antagonistas & inibidores , Estrutura Secundária de Proteína , Sequência de Aminoácidos , Animais , Sequência de Bases , Catepsina L , Galinhas , Clonagem Molecular , Cistatinas/biossíntese , Cisteína Endopeptidases , Variação Genética , Cinética , Dados de Sequência Molecular , Mutagênese Insercional , Oligodesoxirribonucleotídeos , Proteínas Recombinantes/biossíntese , Proteínas Recombinantes/química , Proteínas Recombinantes/farmacologia
17.
FEBS Lett ; 321(1): 93-7, 1993 Apr 19.
Artigo em Inglês | MEDLINE | ID: mdl-8467916

RESUMO

The internal domain 3 of the heavy chain of human kininogen, a cysteine proteinase inhibitor, was amplified by a polymerase chain reaction from the kininogen cDNA clone phKG36. The DNA fragment was expressed in Escherichia coli using the ompA expression vector pASK40 and the resulting protein was isolated from periplasm, purified by S-carboxymethylpapain affinity- and ion-exchange chromatography. The recombinant human kininogen domain 3 is 92% pure, reacts with anti-kininogen antibodies and is actively inhibitory. The expected amino acid sequence of ANSM-[G253-S377] kininogen was confirmed; the inhibitor has a molecular mass of 14,396 Da and an isoelectric point of 6.0 (pH). The determined Ki values of the complexes with papain and cathepsin L are similar to those measured previously with proteolytically liberated kininogen domain 3, and those of single-domain cystatins, like chicken egg white cystatin. However, recombinant kininogen domain 3 is a weak inhibitor of cathepsin B (Ki = 63 nM) as it has been found for native L-kininogen (Ki = 340 nM).


Assuntos
Cininogênios/genética , Sequência de Aminoácidos , Sequência de Bases , Clonagem Molecular , Inibidores de Cisteína Proteinase/química , Inibidores de Cisteína Proteinase/genética , Expressão Gênica , Humanos , Dados de Sequência Molecular , Oligodesoxirribonucleotídeos/química , RNA Mensageiro/genética , Proteínas Recombinantes/genética
18.
Eur J Biochem ; 209(3): 837-45, 1992 Nov 01.
Artigo em Inglês | MEDLINE | ID: mdl-1425692

RESUMO

Using recombinant DNA methods, seven cystatin variants were produced by cassette mutagenesis of a chicken egg white cystatin variant which already contains the mutations Ala3, Glu2, Phe1, Ser1-->Met, Met29-->and Met 89-->Leu. When characterized by structural and functional studies, they were all found to harbour mutations in the first hairpin loop, the so-called 'QXVXG' region, which is highly conserved within the cystatin superfamily and thought to be important for its inhibitory activity towards cysteine proteinases. They were purified to more than 90% homogeneity and analysed by SDS/PAGE, HPLC, tryptic peptide mapping, N-terminal amino acid sequencing and ELISA. Structural model building of the variants and their complexes with papain was performed using computer graphics based on the crystallographic coordinates of chicken egg white cystatin and the papain-stefin complex. Only minor conformational changes were required for modelling the mutants or complexes. Equilibrium dissociation constants and rate constants of complex formation of the variants with papain, actinidin as well as cathepsin B and L were determined by kinetic measurements using fluorogenic substrates. The single exchanges Gln53-->Glu, Gln53-->Asn, Val44-->Asp, Gly57-->Ala and the double exchanges Arg52-->Leu, Gln53-->Glu, Gln53-->Asn, Ser56-->Ala, Leu54-->Met, Gly57-->Ala reduced the inhibition of papain, actinidin and cathespin B significantly by 10-1000-fold. With the exception of the Val55-->Asp variant, the differences in the Ki values are mainly due to larger k off values, whereas the kon values seem to be more or less unaffected by the selected mutations. The effect on the inhibition of papain is generally smaller than the effects on actinidin and cathepsin B inhibition. Cathepsin L inhibition is strikingly insensitive to all mutations. These distinct effects of the inhibitor variants indicate differences in proteinase-inhibitor-protein interactions between closely related cysteine proteinases. In addition, the results verify the prediction, made earlier from sequence alignment studies and from a docking model of the chicken cystatin-papain complex, that the first hairpin loop of cystatins is essential for effective inhibition.


Assuntos
Cistatinas/genética , Sequência de Aminoácidos , Animais , Galinhas , Cromatografia Líquida de Alta Pressão , Clonagem Molecular , Cistatinas/química , Clara de Ovo , Eletroforese em Gel de Poliacrilamida , Genes Sintéticos , Cinética , Modelos Moleculares , Dados de Sequência Molecular , Mutagênese Insercional , Proteínas Recombinantes/química , Proteínas Recombinantes/genética
19.
Biol Chem Hoppe Seyler ; 373(7): 433-40, 1992 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-1515071

RESUMO

The dipeptidyl rhodamine diamide substrates (Z-Phe-Arg)2-R110 and (Z-Arg-Arg)2-R110 are 820- and 360-fold more selective for cathepsin L than for cathepsin B allowing a sensitive determination of cathepsin L activity in the presence of high activity of cathepsin B. The results obtained with cell lysates suggest that the cysteine proteinase activity of vital macrophages detected by flow cytometry with these substrates is mainly due to cathepsin L.


Assuntos
Catepsinas/análise , Endopeptidases , Rodaminas/química , Animais , Catepsina B/análise , Catepsina L , Cumarínicos/metabolismo , Cisteína Endopeptidases , Citometria de Fluxo , Corantes Fluorescentes , Humanos , Concentração de Íons de Hidrogênio , Técnicas In Vitro , Cinética , Monócitos/enzimologia , Neutrófilos/enzimologia , Permeabilidade , Fagocitose , Ratos , Ratos Endogâmicos , Espectrometria de Fluorescência , Especificidade por Substrato
20.
Biol Chem Hoppe Seyler ; 373(7): 547-54, 1992 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-1381188

RESUMO

The analysis of lysosomal proteases in cell lysates is complicated by pH-dependent and oxidative changes of their activity and complex formation with cytosolic inhibitors. Therefore, new flow cytometric methods were developed for the intracellular measurement of protease activities in viable cells. Intracellular cleavage of substrates such as Z-Arg-Arg-4-trifluoromethylcoumarinyl-7-amide to green fluorescent 7-amino-4-trifluoromethylcoumarin (AFC) in viable neutrophils and monocytes was only detected following phagocytosis of Escherichia coli. A measurement of the cysteine or serine proteinase activities in resting human leukocytes was, however, not possible with AFC derivatives as the overlapping blue fluorescence of the substrates reduces sensitivity. Nonfluorescent bis-substituted peptide derivatives of rhodamine 110 (R110), which are intracellularly cleaved to green fluorescent mono-substituted R110 and free R110 proved to be more sensitive substrates. The activity of the lysosomal cysteine proteinases of human monocytes or rat macrophages, i.e. cathepsin B and L, was specifically measured with (Z-Arg-Arg)2-R110, (Z-Phe-Arg)2-R110, or (Z-Ala-Arg-Arg)2-R110. Fluorescence generation was completely inhibited by Z-Phe-Ala-diazomethane or E-64. The serine proteinases of human neutrophils were analyzed with Elastase-substrates such as (Z-Ala-Ala)2-R110 or (Z-Ala-Ala-Ala)2-R110. Specificity was shown by inhibition with diisopropylfluorophosphate.


Assuntos
Endopeptidases/análise , Sequência de Aminoácidos , Catepsina B/análise , Catepsina L , Catepsinas/análise , Cisteína Endopeptidases , Eritrócitos/química , Eritrócitos/metabolismo , Escherichia coli/metabolismo , Citometria de Fluxo , Humanos , Técnicas In Vitro , Lisossomos/enzimologia , Dados de Sequência Molecular , Monócitos/enzimologia , Neutrófilos/enzimologia , Elastase Pancreática/análise , Elastase Pancreática/metabolismo , Peptídeos/análise , Peptídeos/síntese química , Fagocitose/fisiologia , Rodaminas , Espectrometria de Fluorescência , Coloração e Rotulagem
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