Characterization of the composition, structure, and functional potential of bamboo rhizosphere archaeal communities along a chromium gradient.

Introduction: Bamboo can be used in the phytoremediation of heavy metal pollution. However, the characteristics of the bamboo rhizosphere archaeal community in Cr-contaminated soil under field conditions remain unclear. Methods: In this study, high-throughput sequencing was used to examine the rhizosphere soil archaeal communities of Lei bamboo (Phyllostachys precox) plantations along a Cr pollution gradient. Results: The results revealed U-shaped relationships between Cr [total Cr (TCr) or HCl-extractable Cr (ACr)] and two alpha indices (Chao1 and Shannon) of archaea. We also established that high Cr concentrations were associated with a significant increase in the abundance of Thaumarchaeota and significant reductions in the abundances of Crenarchaeota and Euryarchaeota. The archaeal co-occurrence networks reduced in complexity with Cr pollution, decreasing the community's resistance to environmental disturbance. Candidatus nitrosotalea and Nitrososphaeraceae_unclassified (two genera of Thaumarchaeota) were identified as keystone taxa. The community structure of soil archaeal communities was also found to be affected by TCr, ACr, pH, total organic C, and available nutrient (N, P, and K) concentrations, with pH being identified as the most reliable predictor of the archaeal community in assessed soils. Discussion: These findings enhance our understanding of microbial responses to Cr pollution and provide a basis for developing more refined approaches for the use of bamboo in the remediation of Cr-contaminated soils.

Pupal and Adult Experience Affect Adult Response to Food Odour Components in the Flower-Visiting Butterfly Tirumala limniace.

Butterflies have the ability to learn to associate olfactory information with abundant food sources during foraging. How the co-occurrence of both food and food odours affects the learning behaviour of adults and whether butterflies perceive the odour of their surroundings and develop a preference for that odour during the pupal stage have rarely been tested. We examined the effect of experience with food odour components (α-pinene and ethyl acetate) during the pupal and adult stages on the foraging behaviour of the flower-visiting butterfly Tirumala limniace. We found that α-pinene exposure during the pupal stage changed the foraging preference of newly emerged adults. T. limniace exhibits olfactory learning in the adult stage, and adult learning may influence their previous pupal memory. Moreover, adults' odour preference did not continue to increase over multiple training times. The learning ability of adults for floral odours (α-pinene) was greater than that for non-floral odours (ethyl acetate). In contrast to previous studies, we found that males learned odours more efficiently than females did. This could be attributed to differences in antennal sensilla, affecting sensitivity to compounds and nectar demand between males and females. Our study provides further insight into how olfactory learning helps flower-visiting butterflies use food odours to forage better.

Integrated Genomics and Transcriptomics Provide Insights into Salt Stress Response in Bacillus subtilis ACP81 from Moso Bamboo Shoot (Phyllostachys praecox) Processing Waste.

Salt stress is detrimental to the survival of microorganisms, and only a few bacterial species produce hydrolytic enzymes. In this study, we investigated the expression of salt stress-related genes in the salt-tolerant bacterial strain Bacillus subtilis ACP81, isolated from bamboo shoot processing waste, at the transcription level. The results indicate that the strain could grow in 20% NaCl, and the sub-lethal concentration was 6% NaCl. Less neutral protease and higher cellulase and ß-amylase activities were observed for B. subtilis ACP81 under sub-lethal concentrations than under the control concentration (0% NaCl). Transcriptome analysis showed that the strain adapted to high-salt conditions by upregulating the expression of genes involved in cellular processes (membrane synthesis) and defense systems (flagellar assembly, compatible solute transport, glucose metabolism, and the phosphotransferase system). Interestingly, genes encoding cellulase and ß-amylase-related (malL, celB, and celC) were significantly upregulated and were involved in starch and sucrose metabolic pathways, and the accumulated glucose was effective in mitigating salt stress. RT-qPCR was performed to confirm the sequencing data. This study emphasizes that, under salt stress conditions, ACP81 exhibits enhanced cellulase and ß-amylase activities, providing an important germplasm resource for saline soil reclamation and enzyme development.

Effects of on- and off-year management practices on the soil organic C fractions and microbial community in a Moso bamboo (Phyllostachys edulis) forest in subtropical China.

On- and off-year management practices are usually adopted in Moso bamboo (Phyllostachys edulis) forests to achieve higher productivity. However, little is known about the effects of these management practices on soil C sequestration and microbial community structure. In the present study, soil nutrient content, organic C fractions, and bacterial and fungal communities were comparatively investigated in on- and off-year bamboo stands. The results showed that soil organic C (SOC), alkali-hydrolyzable N (AN), and available P (AP) in the on-year were significantly lower (p ≤ 0.05) than those in the off-year. Among the different soil organic C fractions, easily oxidizable organic C (EOC), microbial biomass C (MBC), Ca-bound SOC (Ca-SOC), and Fe/Al-bound SOC (Fe/Al-SOC) also had significantly higher contents in the off-year than in the on-year, with MBC and EOC decreasing by 56.3% and 24.5%, respectively, indicating that both active and passive soil organic C pools increased in the off-year. However, the alpha diversities of both soil bacteria and fungi were significantly lower in the off-year soils than in the on-year soils. The bacterial taxa Actinobacteria, Planctomycetes, WPS-2, Acidothermus, Candidatus_Solibacter, Burkholderia-Caballeronia-Paraburkholderia, and Candidatus_Xiphinematobacter were increased in off-year soils relative to on-year soils. Meanwhile, fungal taxa Ascomycota, Mortierella, Hypocrea, Cryptococcus, Clitopilus, and Ceratocystis were significantly increased in on-year soils. Soil pH, SOC, AP, MBC, EOC, and Ca-SOC were significantly correlated with bacterial and fungal communities, with soil pH being the most important driving factor for the shift in bacterial and fungal communities. Our findings showed that the studied bamboo forest possessed an inherent restorative ability in the off-year, which can reverse the soil nutrient and C depletion in the on-years and ensure soil fertility in the long term.

Determination of the geographical origin of Tetrastigma hemsleyanum Diels & Gilg using an electronic nose technique with multiple algorithms.

Tetrastigma hemsleyanum Diels & Gilg, an herbal medicinal plant, is planted widely in bamboo forests in southern China to promote economic benefits. Volatile compounds (VOCs) of T. hemsleyanum from different geographical regions are difficult to identify in field forests. In this study, VOCs from leaf samples of different geographical origins were analyzed using an electronic nose with 10 different sensors. Principal component analysis (PCA), partial least-squares regression (PLS), hierarchical cluster analysis (HCA), and radial basis function (RBF) neural networks were used to determine differences among different local samples. The results demonstrated that PCA achieved an accurate discrimination percentage of 91.31% for different samples and HCA separated the samples into different groups. The RBF neural network was successfully applied to predict samples with no specified localities. T. hemsleyanum samples from geographically close regions tended to group together, whereas those from distant geographical regions showed obvious differences. These results indicate that an electronic nose is an effective tool for detecting VOCs and discriminating the geographical origins of T. hemsleyanum. This study provides insights for further studies on the fast detection of VOCs from plants and effect of forests and plant herbal medicines on improving air quality.

Evaluating the Rhizosphere and Endophytic Microbiomes of a Bamboo Plant in Response to the Long-Term Application of Heavy Organic Amendment.

Root-associated bacteria play a major role in plant health and productivity. However, how organic amendment influences root-associated bacteria is uncertain in Lei bamboo (Phyllostachys praecox) plantations. Here, we compared the rhizosphere and endophytic microbiomes in two Lei bamboo plantations with (IMS) and without (TMS) the application of organic amendment for 16 years. The results showed IMS significantly increased (p < 0.05) the relative abundance of Proteobacteria and significantly decreased (p < 0.05) the relative abundance of Acidobacteria, Bacteroidetes, and Verrucomicrobiota. The root endophytic Proteobacteria and Acidobacteria were significantly higher in abundance (p < 0.05) in the IMS than in the TMS, while Actinobacteria and Firmicutes were significantly lower in abundance. Five taxa were assigned to Proteobacteria and Acidobacteria, which were identified as keystones in the rhizosphere soil microbiome, while two species taxonomically affiliated with Proteobacteria were identified as keystones in the root endophytic microbiota, indicating this phylum can be an indicator for a root-associated microbiome in response to IMS. The soil pH, soil total organic carbon (TOC), total nitrogen (TN), total phosphorus (TP), available potassium (AK), and TOC:TP ratio were significantly correlated (p < 0.05) with the bacterial community composition of both rhizosphere soils and root endophytes. TMS increased the microbial network complexity of root endophytes but decreased the microbial network complexity of rhizosphere soil. Our results suggest IMS shapes the rhizosphere and endophytic bacterial community compositions and their interactions differently, which should be paid attention to when designing management practices for the sustainable development of forest ecosystems.

Changes in Soil Organic Carbon Fractions and Fungal Communities, Subsequent to Different Management Practices in Moso Bamboo Plantations.

Moso bamboo (Phyllostachys pubescens) has an extremely fast growth rate and major carbon sequestration potential. However, little information is available on the dynamics of soil C accumulation and fungi communities related to different management practices. Here, we investigated changes in the soil organic carbon (SOC) fractions and fungal communities of a Moso bamboo plantation under three different management practices (M0: undisturbed; M1: extensively managed; and M2: intensively managed). Compared with M0, SOC levels were reduced by 41.2% and 71.5% in M1 and M2, respectively; furthermore, four SOC fractions (C1: very labile; C2: labile; C3: less labile; and C4: nonlabile) and the carbon management index (CMI) were also significantly reduced by plantation management. These practices further altered fungal communities, for example, by increasing Basidiomycota and Mortierellomycota, and by decreasing Ascomycota and Rozellomycota. Pyrenochaeta, Mortierella, Saitozyma, and Cladophialophora were identified as keystone taxa. Soil fungal communities were significantly related to the pH, NH4-N, AP, C3, and the C4 fractions of SOC. Random forest modeling identified soil C3 and Mortierella as the most important predictors of the CMI. Our results suggest that reducing human interference would be beneficial for fungal community improvement and C sequestration in Moso bamboo plantations.

Corrigendum: Effects of on- and off-year management practices on the soil organic C fractions and microbial community in a Moso bamboo (Phyllostachys edulis) forest in subtropical China.

[This corrects the article DOI: 10.3389/fpls.2022.1020344.].

Metagenomic insights into the characteristics of soil microbial communities in the decomposing biomass of Moso bamboo forests under different management practices.

Introduction: Considering the rapid growth and high biomass productivity, Moso bamboo (Phyllostachys edulis) has high carbon (C) sequestration potential, and different management practices can strongly modify its C pools. Soil microorganisms play an important role in C turnover through dead plant and microbial biomass degradation. To date, little is known about how different management practices affect microbial carbohydrate-active enzymes (CAZymes) and their responses to dead biomass degradation. Methods: Based on metagenomics analysis, this study analyzed CAZymes in three comparable stands from each Moso bamboo plantation: undisturbed (M0), extensively managed (M1), and intensively managed (M2). Results: The results showed that the number of CAZymes encoding plant-derived component degradation was higher than that encoding microbe-derived component degradation. Compared with the M0, the CAZyme families encoding plant-derived cellulose were significantly (p < 0.05) high in M2 and significantly (p < 0.05) low in M1. For microbe-derived components, the abundance of CAZymes involved in the bacterial-derived peptidoglycan was higher than that in fungal-derived components (chitin and glucans). Furthermore, M2 significantly increased the fungal-derived chitin and bacterial-derived peptidoglycan compared to M0, whereas M1 significantly decreased the fungal-derived glucans and significantly increased the bacterial-derived peptidoglycan. Four bacterial phyla (Acidobacteria, Actinobacteria, Proteobacteria, and Chloroflexi) mainly contributed to the degradation of C sources from the plant and microbial biomass. Redundancy analysis (RDA) and mantel test suggested the abundance of CAZyme encoding genes for plant and microbial biomass degradation are significantly correlated with soil pH, total P, and available K. Least Squares Path Modeling (PLS-PM) showed that management practices indirectly affect the CAZyme encoding genes associated with plant and microbial biomass degradation by regulating the soil pH and nutrients (total N and P), respectively. Discussion: Our study established that M2 and M1 impact dead biomass decomposition and C turnover, contributing to decreased C accumulation and establishing that the bacterial community plays the main role in C turnover in bamboo plantations.

Intercropping improves heavy metal phytoremediation efficiency through changing properties of rhizosphere soil in bamboo plantation.

Moso bamboo is considered a potential species for heavy metal (HM) phytoremediation; however, the effect of intercropping on rhizosphere and phytoextraction remains to be elucidated. We comparatively investigated rhizobacteria, soil properties, and phytoextraction efficiency of monoculture and intercropping of Moso bamboo and Sedum plumbizincicola in Cu/Zn/Cd-contaminated soil. Compared with monocultures, intercropping increased the bacterial α-diversity indices (Shannon, Chao1) and the number of biomarkers. Intercropping reduced the contents of soil organic matter (SOM), available nutrients, and Cd and Cu in rhizosphere soils, and reduced the Cd and Zn contents in tissues of sedum. By contrast, Cd and Zn contents in tissues of bamboo increased, and the increase of organic acid in root exudates from intercropping could facilitate the HM absorption. The total amount of Cu, Zn, and Cd removed from the soil in intercropping system was 1.2, 1.9, and 1.8 times than those in monoculture bamboo, respectively. The abundances of Proteobacteria, Acidobacteria, Verrucomicrobia and Actinobacteria were higher in intercropping, playing an important role in soil nutrient cycles and HM remediation. These bacterial communities were closely correlated (P < 0.01) with SOM, available nitrogen, available phosphorus, and HMs. The results suggested this intercropping pattern can increase HM removal efficiency from polluted soils.

Drought stress introduces growth, physiological traits and ecological stoichiometry changes in two contrasting Cunninghamia lanceolata cultivars planted in continuous-plantation soils.

BACKGROUND: The decrease in Cunninghamia lanceolata (Lamb.) production on continuously planted soil is an essential problem. In this study, two-year-old seedlings of two cultivars (a normal cultivar, NC, and a super cultivar, SC) were grown in two types of soil (not planted (NP) soil; continuously planted (CP) soil) with three watering regimes, and the interactive effects on plant growth and physiological traits were investigated in a greenhouse experiment. The water contents of the soil in the control (CK) (normal water content), medium water content (MWC) and low water content (LWC) treatments reached 75-80 %, 45-50 % and 20-25 % of the field water capacity, respectively. RESULTS: The results indicated that the CP soil had a negative effect on growth and physiological traits and that the LWC treatment caused even more severe and comprehensive negative effects. In both cultivars, the CP soil significantly decreased the height increment (HI), basal diameter increment (DI), dry matter accumulation (DMA), net photosynthetic rate (Pn), total chlorophyll content (TChl), carotenoid content (Caro) and photosynthetic nitrogen use efficiency (PNUE). Compared to the NP soil, the CP soil also decreased the proline and soluble protein contents, nitrogen use efficiency (NUE) and phosphorus use efficiency (PUE) and increased the nitrogen:phosphorus ratio in roots, stems and leaves. The LWC treatment decreased growth and photosynthesis, changed ecological stoichiometry, induced oxidative stress, promoted water use efficiency and damaged chloroplast ultrastructure. Significant increases in ascorbate peroxidase (APX), peroxidase (POD), soluble protein and proline contents were found in the LWC treatment. Compared with the NC, the SC was more tolerant to the CP soil and water stress, as indicated by the higher levels of DMA, Pn, and WUE. After exposure to the CP soil and watering regimes, the decreases in biomass accumulation and gas exchange were more pronounced. CONCLUSIONS: The combination of drought and CP soil may have detrimental effects on C. lanceolata growth, and low water content enhances the impacts of CP soil stress on C. lanceolata seedlings. The superiority of the SC over the NC is significant in Chinese fir plantation soil. Therefore, continuously planted soil can be utilized to cultivate improved varieties of C. lanceolata and maintain water capacity. This can improve their growth and physiological performance to a certain extent.

Understanding variations in soil properties and microbial communities in bamboo plantation soils along a chromium pollution gradient.

With high biomass productivity and resistance to heavy metals (HM) stress, bamboo has strong potential for HM phytoremediation. However, few studies have been conducted under field conditions to explore changes in soil physicochemical and microbial properties of bamboo forests with HM-contaminated soils. This study established bamboo (Phyllostachys praecox) plantations in five Cr-contaminated sites with different pollution levels (low, L; low-moderate, LM; moderate, M; moderate-high, MH; and high, H). We determined soil chemical properties, total and available Cr content, as well as bacterial and fungal community structures from 0 to 20 cm depth along the pollution gradient, and evaluated their interactions. The results revealed a corresponding decrease in soil pH, alkali-hydrolysable N (AN), along with urease and sucrase activities, as Cr pollution increased. In contrast, total organic carbon (TOC) increased with increasing Cr pollution. Soil available P (AP) and acid phosphatase activity did not differ significantly. Different pollution level resulted in distinct bacterial and fungal communities, with Proteobacteria, Acidobacteria, Actinobacteria, Ascomycota, and Basidiomycota being the dominant phyla across the five bamboo soils. Both total Cr (TCr) and HCl-extractable Cr (ACr) negatively correlated with alpha indices (Chao1 and Shannon) for bacteria but not for fungi, indicating that the latter is more resistant to Cr pollution. Decrease in soil pH and increase in TCr and ACr from L to H were closely related to the shift of bacterial and fungal communities. These changes reduced soil N and C cycles. Our findings suggest that improving soil acidic conditions and N availability enhances carbon and nitrogen cycles via altering soil microbial structure and activities. This, in turn, can increase phytoremediation efficiency in the bamboo ecosystem.

Deciphering the rhizosphere microbiome of a bamboo plant in response to different chromium contamination levels.

Bamboo has been considered a potential plant species for phytoremediation due to its high biomass and heavy metal (HM) resistance. However, little is known about the interactions between bamboo and soil microbial activities in HM-contaminated soils. Here, we investigated the characteristics of microbial communities in the rhizosphere soil of Lei bamboo (Phyllostachys praecox) along a chromium (Cr) gradient. We found that the soil Cr content was positively correlated with the total organic carbon (TOC) and HCl-extractable Cr but negatively correlated with the pH and bacterial and fungal Shannon indices. Proteobacteria and Ascomycota predominated in the bamboo rhizosphere under Cr pollution. A co-occurrence network showed that two of the most Cr-sensitive bacterial genera and keystone taxa were from the Acidobacteria, indicating that this phylum can be as an indicator for the studied Cr-polluted soils. Redundancy analysis revealed that both the soil bacterial and fungal community compositions were significantly correlated (p < 0.05) with Cr, pH, TOC, alkali-hydrolysable N (AN), and available phosphorus (AP). The increase in TOC as the Cr content increased can be ascribed to an adverse Cr effect on the soil microflora, probably because the microbial biomass was less effective in mineralizing soil C under Cr-polluted conditions.

Host plants alter their volatiles to help a solitary egg parasitoid distinguish habitats with parasitized hosts from those without.

When attacked by herbivores, plants emit volatiles to attract parasitoids and predators of herbivores. However, our understanding of the effect of plant volatiles on the subsequent behaviour of conspecific parasitoids when herbivores on plants are parasitized is limited. In this study, rice plants were infested with gravid females of the brown planthopper (BPH) Nilaparvata lugens for 24 hr followed by another 24 hr in which the BPH eggs on plants were permitted to be parasitized by their egg parasitoid, Anagrus nilaparvatae; volatiles from rice plants that underwent such treatment were less attractive to subsequent conspecific parasitoids compared to the volatiles from plants infested with gravid BPH females alone. Chemical analysis revealed that levels of JA and JA-Ile as well as of four volatile compounds-linalool, MeSA, α-zingiberene and an unknown compound-from plants infested with BPH and parasitized by wasps were significantly higher than levels of these compounds from BPH-infested plants. Laboratory and field bioassays revealed that one of the four increased chemicals-α-zingiberene-reduced the plant's attractiveness to the parasitoid. These results suggest that host plants can fine-tune their volatiles to help egg parasitoids distinguish host habitats with parasitized hosts from those without.

Bamboo - An untapped plant resource for the phytoremediation of heavy metal contaminated soils.

Phytoremediation is a green technology used for the remediation of heavy metal soils. However, up to now, very few plants are known to be both hyperaccumulators and fast-growers. In contrast, some non-hyperaccumulators, which possess lower extraction capacities than hyperaccumulators, are fast-growing species with much higher total biomass yields and are potential alternative phytoremediators. Bamboo is a taxonomic group comprised of 1439 species that are mostly distributed in the tropics and subtropics. Although limited studies on bamboo for phytoremediation, recent studies have shown that some bamboo species have high ability to adapt to metalliferous environments and a high capacity to absorb heavy metals. Bamboo tissues in the rhizome and culm can accumulate a large amount of heavy metals that mainly accumulate in the cell wall, vacuole, and cytoplasm. Certain bamboo species such as moso bamboo, Phyllostachys praecox, have been shown to have a high endurance in metal contaminated soils, enabling a considerable uptake and accumulation of heavy metals. However, excessive concentrations of heavy metals may cause oxidative stress and damage bamboo plants. Therefore, several management strategies have been developed to improve the phytoremediation ability of bamboo species, including the selection of tolerant bamboo species, intercropping with hyperaccumulators, fertilization applications, and employment of chelate in soil. This review demonstrates that bamboo species, which have high biomass productivity, short rotation, and high economic value, can be used for phytoremediation. However, the mechanisms of heavy metal uptake, transport, sequestration, and detoxification of different bamboo species require urgent investigation.

[Effects of management measures on organic carbon, nitrogen and chemical structure of different soil fractions in Phyllostachys edulis plantations.] / 经营措施对毛竹林土壤不同组分有机碳、氮及化学结构的影响.

To examine the effects of management measures on carbon and nitrogen contents, as well as their distribution and structural characteristics of different soil fractions in Moso bamboo plantations, we compared three types of the bamboo forests (undisturbed, extensively managed, and intensively managed) and the control secondary broadleaved evergreen forest using the methods of physical fractionation, chemical and biological analysis and Fourier-transform infrared spectroscopy (FTIR). The results showed that soil total organic carbon (TOC) and total nitrogen (TN) content, as well as free particulate organic carbon and nitrogen, soluble organic carbon and nitrogen (DOC, DON), and mineral-associated organic carbon and nitrogen in the undisturbed and extensively managed Moso bamboo plantations were significantly increased compared with that in the control. The distribution ratio of free particulate organic carbon and nitrogen in the undisturbed Moso bamboo plantation significantly increased, with mineral-associated organic carbon being the largest reservoir of soil organic carbon (67.6%). Intensive management resulted in the decrease of soil organic carbon, total nitrogen storage, and the contents of each component, but significantly increased DOC/TOC, the ratio of microbial biomass nitrogen to TN as well as the ratio of microbial biomass carbon to TOC (microbial quotient). Management measures significantly affected the chemical structure of SOC. Compared with the control, the relative intensities of phenolic and alcoholic-OH, aliphatic methyl and methylene, aromatic C=C, and carbonyl C=O absorption were higher in the SOC of undisturbed and extensively managed Moso bamboo plantations, and soil hydrophobicity was significantly increased. Results from correlation analysis showed that soil hydrophobicity and the content of aliphatic and aromatic groups were negatively correlated with microbial quotient and positively correlated with TOC and TN content. In conclusion, the increased inputs of organic matter residues (such as litter and roots) could contribute to the relative accumulation of chemical resistance compounds with reduced human disturbance, which significantly enhanced chemical stability of soil organic carbon. Soil clay minerals played a key role in protecting soil organic carbon through the formation of mineral-organic compounds, which facilitate the stability of soil carbon storage and the long-term preservation of soil carbon.

Responses of soil nutrients and microbial communities to intercropping medicinal plants in moso bamboo plantations in subtropical China.

Bamboo forests are one of the most important forest resources in subtropical China. A pure, single-layer bamboo forest is considered an optimal habitat for intercropping medicinal herbs. Soil microorganisms have an important role in various ecological processes and respond quickly to environmental changes. However, changes in soil nutrients and microbial communities associated with agroforestry cultivation methods remain poorly documented. In the present study, a pure moso bamboo (Phyllostachys edulis) forest (Con) and three adjacent moso bamboo-based agroforestry (BAF) systems (moso bamboo-Paris polyphylla (BP), moso bamboo-Tetrastigma hemsleyanum (BT) and moso bamboo-Bletilla striata (BB)) were selected; and their soil chemical properties and bacterial communities were studied and compared to evaluate the effects of agroforestry on soil bacterial communities and the relationship between soil properties and bacterial communities in BAF systems. Results showed that compared with soils under the Con, soils under the BAF systems had more (p < 0.05) soil organic carbon (SOC) and available nitrogen (AN) but lower (p < 0.05) pH and available potassium (AK). In addition, compared with the Con system, the BB and BT systems had significantly greater (p < 0.05) available phosphorus (AP). Compared with that in the Con system, the Shannon index in the BAF systems was significantly greater (p < 0.05), but the Chao1 index not different. On the basis of relative abundance values, compared with the Con soils, the BAF soils had a significantly greater abundance of (p < 0.05) Bacteroidetes and Planctomyces but a significantly lower abundance of (p < 0.05) Verrucomicrobia, Gemmatimonadetes and Candidatus Xiphinematobacter. Moreover, compared with the Con system, the BB and BT systems had a greater (p < 0.05) abundance of Actinobacteria, Rhodoplanes, Candidatus Solibacter and Candidatus Koribacter. Redundancy analysis (RDA) revealed that soil pH, SOC and AP were significantly correlated with bacterial community composition. Results of this study suggest that intercropping medicinal herbs can result in soil acidification and potassium (K) depletion; thus, countermeasures such as applications of K fertilizer and alkaline soil amendments are necessary for BAF systems.

Changes of Root Endophytic Bacterial Community Along a Chronosequence of Intensively Managed Lei Bamboo (Phyllostachys praecox) Forests in Subtropical China.

Endophytic bacteria widely exist inside plant tissues and have an important role in plant growth and development and the alleviation of environmental stress. However, little is known about the response of root-associated bacterial endophytes of Lei bamboo (Phyllostachys praecox) to intensive management, which is a common management practice for high bamboo shoot production in subtropical China. In this study, we comparatively investigated the root endophytic bacterial community structures in a chronosequence of intensively managed (5a, 10a, 15a, and 20a) and extensively managed plantations (as control, Con). The results showed that endophytic Proteobacteria was the dominant bacterial phylum in the bamboo roots. Intensive management significantly increased (p < 0.05) the bacterial observed species and Chao1 (except 5a) indices associated with bamboo roots. The relative abundances of Firmicutes, Bacteroidetes, and Actinobacteria (except 15a) in the intensively managed bamboo roots significantly increased (p < 0.05) compared with those in Con, while the relative abundance of Proteobacteria significantly decreased in intensively managed bamboo roots (p < 0.05). The phyla Proteobacteria, Actinobacteria, Bacteroidetes, and Firmicutes were the biomarkers in Con, 5a, 15a, and 20a, respectively. Redundancy analysis (RDA) showed that soil alkali-hydrolysable N (AN), available phosphorus (AP), available K (AK), and total organic carbon (TOC) were significantly correlated (p < 0.05) with the bacterial community compositions. Our results suggest that the root endophytic microbiome of Lei bamboo was markedly influenced by intensive management practices, and the available nutrient status could be the main driving factor for such shifts. Although heavy fertilization in the intensive management system increased the diversity indices, the rapid changes in root endophyte communities and their relevant functions might indicate a high risk for sustainable management.

Dormancy release and germination of Taxus yunnanensis seeds during wet sand storage.

Dormancy is an innate constraint on germination that occurs across all life forms. In this study, we investigated the seed dormancy release and germination characters of Taxus yunnanensis by exploring the seed morphology, permeability, germination inhibitors, endogenous hormones, and embryo germination in vitro during wet sand storage. Our results showed that seeds and embryos grew to a critical size to germination and permeability increased with the extension of storage. Seed coat and kernel methanol extracts reduced Brassica campestris seed vigor index. The in vitro embryo germination rate increased by 12.20% after storage for 30-360 d, whereas seed germination occurred after 450 d. Gibberellic acid and zeatin riboside contents were relatively stable, whereas abscisic acid (ABA) content decreased; indole acetic acid (IAA) content and the IAA/ABA ratio showed increasing trends. These results indicate that ABA is the key inhibitor of germination in Taxus. The chemical(s) in seed coat and kernel cause the inhibition of seed germination. Taken together, Taxus seeds have morphophysiological dormancy, in which the embryos can continue to grow and hormone imbalance inhibits further development and germination. Further, seed dormancy is active even during the middle of storage and shows "double peaks" during the entire dormancy process.

Comparison of heavy metal phytoremediation in monoculture and intercropping systems of Phyllostachys praecox and Sedum plumbizincicola in polluted soil.

A bamboo species (Phyllostachys praecox) and a Cd/Zn hyperaccumulator (Sedum plumbizincicola) were tested under different planting systems to compare their heavy metal phytoremediation ability. P. praecox (MP), S. plumbizincicola (MS) and P. praecox × S. plumbizincicola (IPS) plantations were established in Cu, Zn, and Cd-contaminated soil. Soil properties and heavy metal contents in plants were determined and compared after four years of plantation establishment. The rankings of available and total metal contents in soil layers were MP > MS > IPS (0-20 cm) and MP > IPS > MS (20-40 cm, except for Cu), respectively. The Cu and Zn contents in mature bamboo tissues were significantly lower, but the Cd contents in bamboo tissues (except for leaves) higher, in the IPS than in the MP. The bioconcentration and the translocation factors in most of bamboo tissues showed an increasing trend from the MP to the IPS. Heavy metal distribution in plants is greatly affected by the planting patterns. The tested intercropping system of two plant species showed higher biomass productivity, implying more heavy metals can be removed from the soil through the harvesting of plants. Therefore, the IPS leads to significant improvement of soil phytoremediation.