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1.
Epilepsia ; 58(1): 94-104, 2017 01.
Artigo em Inglês | MEDLINE | ID: mdl-27859029

RESUMO

OBJECTIVE: Local field potentials (LFPs) arise from synchronous activation of millions of neurons, producing seemingly consistent waveform shapes and relative synchrony across electrodes. Interictal spikes (IISs) are LFPs associated with epilepsy that are commonly used to guide surgical resection. Recently, changes in neuronal firing patterns observed in the minutes preceding seizure onset were found to be reactivated during postseizure sleep, a process called seizure-related consolidation (SRC), due to similarities with learning-related consolidation. Because IISs arise from summed neural activity, we hypothesized that changes in IIS shape and relative synchrony would be observed in the minutes preceding seizure onset and would be reactivated preferentially during postseizure slow-wave sleep (SWS). METHODS: Scalp and intracranial recordings were obtained continuously across multiple days from clinical macroelectrodes implanted in patients undergoing treatment for intractable epilepsy. Data from scalp electrodes were used to stage sleep. Data from intracranial electrodes were used to detect IISs using a previously established algorithm. Partial correlations were computed for sleep and wake periods before and after seizures as a function of correlations observed in the minutes preceding seizures. Magnetic resonance imaging (MRI) and computed tomography (CT) scans were co-registered with electroencephalography (EEG) to determine the location of the seizure-onset zone (SOZ). RESULTS: Changes in IIS shape and relative synchrony were observed on a subset of macroelectrodes minutes before seizure onset, and these changes were reactivated preferentially during postseizure SWS. Changes in synchrony were greatest for pairs of electrodes where at least one electrode was located in the SOZ. SIGNIFICANCE: These data suggest preseizure changes in neural activity and their subsequent reactivation occur across a broad spatiotemporal scale: from single neurons to LFPs, both within and outside the SOZ. The preferential reactivation of seizure-related changes in IISs during postseizure SWS adds to a growing body of literature suggesting that pathologic neural processes may utilize physiologic mechanisms of synaptic plasticity.


Assuntos
Encéfalo/fisiopatologia , Sincronização de Fases em Eletroencefalografia/fisiologia , Epilepsia/complicações , Transtornos do Sono-Vigília/etiologia , Encéfalo/diagnóstico por imagem , Epilepsia/diagnóstico por imagem , Feminino , Humanos , Imageamento por Ressonância Magnética , Masculino , Fases do Sono/fisiologia , Transtornos do Sono-Vigília/diagnóstico por imagem , Tomógrafos Computadorizados
2.
IEEE Trans Biomed Eng ; 63(1): 67-75, 2016 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-26151930

RESUMO

GOAL: Activities of neuronal networks range from action potential firing of individual neurons, coordinated oscillations of local neuronal assemblies, and distributed neural populations. Here, we describe recordings using hybrid electrodes, containing both micro- and clinical macroelectrodes, to simultaneously sample both large-scale network oscillations and single neuron spiking activity in the medial temporal lobe structures of human subjects during a visual recognition memory task. We quantify and compare single neuron unit activity (SUA) with high-frequency macrofield oscillations (HFOs) for decoding visual images. RESULTS: SUA and HFOs were recorded using hybrid electrodes containing both micro and macroelectrode contacts, implanted in patients with focal epilepsy. Decoding of image properties in different task trials was performed, analyzing SUA and HFO as point processes to capture the dynamics of neurons and their assemblies at different spatiotemporal scales, ranging from submillisecond discharges of single units to fast oscillations across large neuronal populations. Results highlight the limitations and potential complementary use of SUA and HFOs for decoding of general image properties. CONCLUSION: The dynamics of SUA and HFOs can be used to explore a wide range of neuronal assembly activities engaged in human memory processing. SIGNIFICANCE: Hybrid electrodes provide a technological bridge for exploring multiscale activity, spanning individual neurons, their assemblies, and large-scale population activity reflected in local field potentials. Analysis of SUA and HFO dynamics as point processes provides a potentially useful signal processing method for exploring the neuronal correlates operating at different spatial scales.


Assuntos
Encéfalo/fisiologia , Eletroencefalografia/métodos , Memória/fisiologia , Neurônios/fisiologia , Potenciais de Ação/fisiologia , Adulto , Feminino , Humanos , Masculino , Processamento de Sinais Assistido por Computador , Análise e Desempenho de Tarefas , Percepção Visual
3.
J Neurosci ; 35(3): 999-1010, 2015 Jan 21.
Artigo em Inglês | MEDLINE | ID: mdl-25609617

RESUMO

The establishment of memories involves reactivation of waking neuronal activity patterns and strengthening of associated neural circuits during slow-wave sleep (SWS), a process known as "cellular consolidation" (Dudai and Morris, 2013). Reactivation of neural activity patterns during waking behaviors that occurs on a timescale of seconds to minutes is thought to constitute memory recall (O'Keefe and Nadel, 1978), whereas consolidation of memory traces may be revealed and served by correlated firing (reactivation) that appears during sleep under conditions suitable for synaptic modification (Buhry et al., 2011). Although reactivation has been observed in human neuronal recordings (Gelbard-Sagiv et al., 2008; Miller et al., 2013), reactivation during sleep has not, likely because data are difficult to obtain and the effect is subtle. Seizures, however, provide intense and synchronous, yet sparse activation (Bower et al., 2012) that could produce a stronger consolidation effect if seizures activate learning-related mechanisms similar to those activated by learned tasks. Continuous wide-bandwidth recordings from patients undergoing intracranial monitoring for drug-resistant epilepsy revealed reactivation of seizure-related neuronal activity during subsequent SWS, but not wakefulness. Those neuronal assemblies that were most strongly activated during seizures showed the largest correlation changes, suggesting that consolidation selectively strengthened neuronal circuits activated by seizures. These results suggest that seizures "hijack" physiological learning mechanisms and also suggest a novel epilepsy therapy targeting neuronal dynamics during post-seizure sleep.


Assuntos
Epilepsia do Lobo Temporal/fisiopatologia , Memória/fisiologia , Rede Nervosa/fisiopatologia , Neurônios/fisiologia , Convulsões/fisiopatologia , Sono/fisiologia , Potenciais de Ação/fisiologia , Adulto , Eletroencefalografia , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Adulto Jovem
4.
Brain ; 137(Pt 8): 2231-44, 2014 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-24919972

RESUMO

High frequency oscillations are associated with normal brain function, but also increasingly recognized as potential biomarkers of the epileptogenic brain. Their role in human cognition has been predominantly studied in classical gamma frequencies (30-100 Hz), which reflect neuronal network coordination involved in attention, learning and memory. Invasive brain recordings in animals and humans demonstrate that physiological oscillations extend beyond the gamma frequency range, but their function in human cognitive processing has not been fully elucidated. Here we investigate high frequency oscillations spanning the high gamma (50-125 Hz), ripple (125-250 Hz) and fast ripple (250-500 Hz) frequency bands using intracranial recordings from 12 patients (five males and seven females, age 21-63 years) during memory encoding and recall of a series of affectively charged images. Presentation of the images induced high frequency oscillations in all three studied bands within the primary visual, limbic and higher order cortical regions in a sequence consistent with the visual processing stream. These induced oscillations were detected on individual electrodes localized in the amygdala, hippocampus and specific neocortical areas, revealing discrete oscillations of characteristic frequency, duration and latency from image presentation. Memory encoding and recall significantly modulated the number of induced high gamma, ripple and fast ripple detections in the studied structures, which was greater in the primary sensory areas during the encoding (Wilcoxon rank sum test, P = 0.002) and in the higher-order cortical association areas during the recall (Wilcoxon rank sum test, P = 0.001) of memorized images. Furthermore, the induced high gamma, ripple and fast ripple responses discriminated the encoded and the affectively charged images. In summary, our results show that high frequency oscillations, spanning a wide range of frequencies, are associated with memory processing and generated along distributed cortical and limbic brain regions. These findings support an important role for fast network synchronization in human cognition and extend our understanding of normal physiological brain activity during memory processing.


Assuntos
Ondas Encefálicas/fisiologia , Cérebro/fisiologia , Eletroencefalografia/métodos , Memória/fisiologia , Rede Nervosa/fisiologia , Adulto , Afeto/fisiologia , Tonsila do Cerebelo/fisiologia , Tonsila do Cerebelo/cirurgia , Córtex Cerebral/fisiologia , Eletrodos Implantados , Eletroencefalografia/instrumentação , Feminino , Neuroimagem Funcional , Hipocampo/fisiologia , Hipocampo/cirurgia , Humanos , Masculino , Rememoração Mental/fisiologia , Pessoa de Meia-Idade , Reconhecimento Psicológico/fisiologia , Córtex Somatossensorial/fisiologia , Percepção Visual/fisiologia , Adulto Jovem
5.
Epilepsia ; 55(2): 233-44, 2014 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-24483230

RESUMO

OBJECTIVE: Seizures are currently defined by their electrographic features. However, neuronal networks are intrinsically dependent on neurotransmitters of which little is known regarding their periictal dynamics. Evidence supports adenosine as having a prominent role in seizure termination, as its administration can terminate and reduce seizures in animal models. Furthermore, microdialysis studies in humans suggest that adenosine is elevated periictally, but the relationship to the seizure is obscured by its temporal measurement limitations. Because electrochemical techniques can provide vastly superior temporal resolution, we test the hypothesis that extracellular adenosine concentrations rise during seizure termination in an animal model and humans using electrochemistry. METHODS: White farm swine (n = 45) were used in an acute cortical model of epilepsy, and 10 human epilepsy patients were studied during intraoperative electrocorticography (ECoG). Wireless Instantaneous Neurotransmitter Concentration Sensor (WINCS)-based fast scan cyclic voltammetry (FSCV) and fixed potential amperometry were obtained utilizing an adenosine-specific triangular waveform or biosensors, respectively. RESULTS: Simultaneous ECoG and electrochemistry demonstrated an average adenosine increase of 260% compared to baseline, at 7.5 ± 16.9 s with amperometry (n = 75 events) and 2.6 ± 11.2 s with FSCV (n = 15 events) prior to electrographic seizure termination. In agreement with these animal data, adenosine elevation prior to seizure termination in a human patient utilizing FSCV was also seen. SIGNIFICANCE: Simultaneous ECoG and electrochemical recording supports the hypothesis that adenosine rises prior to seizure termination, suggesting that adenosine itself may be responsible for seizure termination. Future work using intraoperative WINCS-based FSCV recording may help to elucidate the precise relationship between adenosine and seizure termination.


Assuntos
Adenosina/biossíntese , Córtex Cerebral/metabolismo , Líquido Extracelular/metabolismo , Convulsões/metabolismo , Adulto , Animais , Córtex Cerebral/fisiologia , Eletroencefalografia/métodos , Líquido Extracelular/fisiologia , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Convulsões/diagnóstico , Convulsões/fisiopatologia , Suínos , Adulto Jovem
6.
J Neurosci ; 33(27): 11100-15, 2013 Jul 03.
Artigo em Inglês | MEDLINE | ID: mdl-23825415

RESUMO

Temporal lobe epilepsy is the most common form of epilepsy in adults. The pilocarpine-treated rat model is used frequently to investigate temporal lobe epilepsy. The validity of the pilocarpine model has been challenged based largely on concerns that seizures might initiate in different brain regions in rats than in patients. The present study used 32 recording electrodes per rat to evaluate spontaneous seizures in various brain regions including the septum, dorsomedial thalamus, amygdala, olfactory cortex, dorsal and ventral hippocampus, substantia nigra, entorhinal cortex, and ventral subiculum. Compared with published results from patients, seizures in rats tended to be shorter, spread faster and more extensively, generate behavioral manifestations more quickly, and produce generalized convulsions more frequently. Similarities to patients included electrographic waveform patterns at seizure onset, variability in sites of earliest seizure activity within individuals, and variability in patterns of seizure spread. Like patients, the earliest seizure activity in rats was recorded most frequently within the hippocampal formation. The ventral hippocampus and ventral subiculum displayed the earliest seizure activity. Amygdala, olfactory cortex, and septum occasionally displayed early seizure latencies, but not above chance levels. Substantia nigra and dorsomedial thalamus demonstrated consistently late seizure onsets, suggesting their unlikely involvement in seizure initiation. The results of the present study reveal similarities in onset sites of spontaneous seizures in patients with temporal lobe epilepsy and pilocarpine-treated rats that support the model's validity.


Assuntos
Modelos Animais de Doenças , Epilepsia do Lobo Temporal/fisiopatologia , Hipocampo/fisiologia , Convulsões/fisiopatologia , Animais , Masculino , Distribuição Aleatória , Ratos , Ratos Sprague-Dawley , Fatores de Tempo
7.
J Neurosci Methods ; 214(1): 21-6, 2013 Mar 30.
Artigo em Inglês | MEDLINE | ID: mdl-23313850

RESUMO

The most direct evaluation of human brain activity has been obtained from intracranial electrodes placed either on the surface of the brain or inserted into the brain to record from deep brain structures. Currently, the placement of intracranial electrodes implies transcranial surgery, either through a burr hole or a craniotomy, but the high degree of invasiveness and potential for morbidity of such major surgical procedures limits the applicability of intracranial recording. The vascular system provides a natural avenue to reach many brain regions that currently are reached by transcranial approaches, along with deep brain structures that cannot be reached via a transcranial approach without significant risk. To determine the applicability of intravascular approaches to high-frequency intracranial monitoring, a catheter containing multiple macro- and micro-electrodes was placed into the superior sagittal sinus of anesthetized pigs in parallel with clinical, subdural electrode grids to record epileptiform activity induced by direct, cortical injection of penicillin and to record responses to electrical stimulation. Intravascular electrodes recorded epileptiform spikes with similar magnitudes and waveshapes to those obtained by surface electrodes, both for macroelectrodes and microelectrodes, including the spatiotemporal evolution of epileptiform activity, suggesting that intravascular electrodes might provide localizing information regarding seizure foci. Sinusoidal electrical stimulation showed that intravascular electrodes provide sufficient broadband fidelity to record high-frequency, physiological events that may also prove useful in localizing seizure onset zones. As intravascular techniques have transformed cardiology, so intravascular neurophysiology may transform intracranial monitoring, in general, and the treatment of epilepsy, in particular.


Assuntos
Eletroencefalografia/métodos , Procedimentos Endovasculares/métodos , Epilepsia/fisiopatologia , Seio Sagital Superior , Animais , Convulsivantes/toxicidade , Eletrodos Implantados , Eletroencefalografia/instrumentação , Procedimentos Endovasculares/instrumentação , Epilepsia/induzido quimicamente , Desenho de Equipamento , Masculino , Microeletrodos , Penicilinas/toxicidade , Sus scrofa , Suínos
8.
Epilepsia ; 53(5): 807-16, 2012 May.
Artigo em Inglês | MEDLINE | ID: mdl-22352423

RESUMO

PURPOSE: Focal seizures are thought to reflect simultaneous activation of a large population of neurons within a discrete region of pathologic brain. Resective surgery targeting this focus is an effective treatment in carefully selected patients, but not all. Although in vivo recordings of single-neuron (i.e., "unit") activity in patients with epilepsy have a long history, no studies have examined long-term firing rates leading into seizures and the spatial relationship of unit activity with respect to the seizure-onset zone. METHODS: Microelectrode arrays recorded action potentials from neurons in mesial temporal structures (often including contralateral mesial temporal structures) in seven patients with mesial temporal lobe epilepsy. KEY FINDINGS: Only 7.6% of microelectrode recordings showed increased firing rates before seizure onset and only 32.4% of microelectrodes showed any seizure-related activity changes. Surprisingly, firing rates on the majority of microelectrodes (67.6%) did not change throughout the seizure, including some microelectrodes located within the seizure-onset zone. Furthermore, changes in firing rate before and at seizure onset were observed on microelectrodes located outside the seizure-onset zone and even in contralateral mesial temporal lobe. These early changes varied from seizure to seizure, demonstrating the heterogeneity of ensemble activity underlying the generation of focal seizures. Increased neuronal synchrony was primarily observed only following seizure onset. SIGNIFICANCE: These results suggest that cellular correlates of seizure initiation and sustained ictal discharge in mesial temporal lobe epilepsy involve a small subset of the neurons within and outside the seizure-onset zone. These results further suggest that the "epileptic ensemble or network" responsible for seizure generation are more complex and heterogeneous than previously thought and that future studies may find mechanistic insights and therapeutic treatments outside the clinical seizure-onset zone.


Assuntos
Mapeamento Encefálico , Ondas Encefálicas/fisiologia , Epilepsia do Lobo Temporal/complicações , Neurônios/fisiologia , Convulsões/etiologia , Convulsões/patologia , Potenciais de Ação/fisiologia , Adulto , Eletrodos Implantados , Eletroencefalografia , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Estatística como Assunto , Adulto Jovem
9.
Neurosurg Rev ; 35(3): 413-9; discussion 419, 2012 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-22370810

RESUMO

Vasospasm is a major contributor to morbidity and mortality in aneurysmal subarachnoid hemorrhage (SAH), with inflammation playing a key role in its pathophysiology. Myeloperoxidase (MPO), an inflammatory marker, was examined as a potential marker of vasospasm in patients with SAH. Daily serum samples from patients with aneurysmal SAH were assayed for MPO, and transcranial Doppler (TCDs) and neurological exams were assessed to determine vasospasm. Suspected vasospasm was confirmed by angiography. Peak MPO levels were then compared with timing of onset of vasospasm, based on clinical exams, TCDs and cerebral angiography. Patients with vasospasm had a mean MPO level of 115.5 ng/ml, compared to 59.4 ng/ml in those without vasospasm, 42.0 ng/ml in those with unruptured aneurysms, and 4.3 ng/ml in normal controls. In patients who experienced vasospasm, MPO was elevated above the threshold on the day of, or at any point prior to, vasospasm in 10 of 15 events (66.7%), and on the day of, or within 2 days prior to, vasospasm in 8 of 15 events (53.3%). Elevated serum MPO correlates with clinically evident vasospasm following aneurysmal SAH. The potential utility of MPO as a marker of vasospasm is discussed.


Assuntos
Aneurisma Intracraniano/sangue , Peroxidase/sangue , Hemorragia Subaracnóidea/sangue , Hemorragia Subaracnóidea/diagnóstico , Vasoespasmo Intracraniano/sangue , Vasoespasmo Intracraniano/diagnóstico , Adulto , Idoso , Isquemia Encefálica/sangue , Isquemia Encefálica/diagnóstico , Feminino , Humanos , Aneurisma Intracraniano/diagnóstico , Masculino , Pessoa de Meia-Idade , Valor Preditivo dos Testes , Hemorragia Subaracnóidea/complicações , Ultrassonografia Doppler Transcraniana , Vasoespasmo Intracraniano/complicações
10.
Epilepsia ; 52(6): e49-53, 2011 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-21627648

RESUMO

Focal cortical epilepsy is currently studied most effectively in humans. However, improvement in cortical monitoring and investigational device development is limited by lack of an animal model that mimics human acute focal cortical epileptiform activity under epilepsy surgery conditions. Therefore, we assessed the swine model for translational epilepsy research. Swine were used due to their cost-effectiveness, convoluted cortex, and comparative anatomy. The anatomy has all the same brain structures as the human, and in similar locations. Focal subcortical injection of benzyl-penicillin produced clinical seizures correlating with epileptiform activity demonstrating temporal and spatial progression. Swine were evaluated under five different anesthesia regimens. Of the five regimens, conditions similar to human intraoperative anesthesia, including continuous fentanyl with low dose isoflorane, was the most effective for eliciting complex, epileptiform activity after benzyl-penicillin injection. The most complex epileptiform activity (spikes, and high frequency activity) was then repeated reliably in nine animals, utilizing 14 swine total. There were 20.1 ± 10.8 [95% confidence interval (CI) 11.8-28.4] epileptiform events with > 3.5 Hz activity occurring per animal. Average duration of each event was 46.3 ± 15.6 (95% CI 44.0-48.6) s, ranging from 20-100 s. In conclusion, the acute swine model of focal cortical epilepsy surgery provides an animal model that mimics human surgical conditions with a large brain and gyrated cortex, and is relatively inexpensive among animal models. Therefore, we feel this model provides a valuable, reliable, and novel platform for translational studies of implantable hardware for intracranial monitoring.


Assuntos
Encéfalo/fisiopatologia , Modelos Animais de Doenças , Eletroencefalografia/métodos , Epilepsias Parciais/fisiopatologia , Pesquisa Translacional Biomédica/métodos , Animais , Eletrodos Implantados , Eletroencefalografia/instrumentação , Epilepsias Parciais/diagnóstico , Masculino , Suínos
11.
J Neurophysiol ; 104(6): 3530-9, 2010 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-20926610

RESUMO

Synchronization of local and distributed neuronal assemblies is thought to underlie fundamental brain processes such as perception, learning, and cognition. In neurological disease, neuronal synchrony can be altered and in epilepsy may play an important role in the generation of seizures. Linear cross-correlation and mean phase coherence of local field potentials (LFPs) are commonly used measures of neuronal synchrony and have been studied extensively in epileptic brain. Multiple studies have reported that epileptic brain is characterized by increased neuronal synchrony except possibly prior to seizure onset when synchrony may decrease. Previous studies using intracranial electroencephalography (EEG), however, have been limited to patients with epilepsy. Here we investigate neuronal synchrony in epileptic and control brain using intracranial EEG recordings from patients with medically resistant partial epilepsy and control subjects with intractable facial pain. For both epilepsy and control patients, average LFP synchrony decreases with increasing interelectrode distance. Results in epilepsy patients show lower LFP synchrony between seizure-generating brain and other brain regions. This relative isolation of seizure-generating brain underlies the paradoxical finding that control patients without epilepsy have greater average LFP synchrony than patients with epilepsy. In conclusion, we show that in patients with focal epilepsy, the region of epileptic brain generating seizures is functionally isolated from surrounding brain regions. We further speculate that this functional isolation may contribute to spontaneous seizure generation and may represent a clinically useful electrophysiological signature for mapping epileptic brain.


Assuntos
Sincronização Cortical/fisiologia , Epilepsias Parciais/fisiopatologia , Vias Neurais/fisiopatologia , Algoritmos , Neoplasias Encefálicas/complicações , Neoplasias Encefálicas/fisiopatologia , Eletrodos Implantados , Eletroencefalografia/instrumentação , Eletroencefalografia/métodos , Ependimoma/complicações , Ependimoma/fisiopatologia , Epilepsias Parciais/etiologia , Dor Facial/fisiopatologia , Dor Facial/terapia , Humanos , Malformações do Desenvolvimento Cortical/complicações , Malformações do Desenvolvimento Cortical/fisiopatologia , Córtex Motor
12.
Artigo em Inglês | MEDLINE | ID: mdl-19963940

RESUMO

Continuous, long-term (up to 10 days) electrophysiological monitoring using hybrid intracranial electrodes is an emerging tool for presurgical epilepsy evaluation and fundamental investigations of seizure generation. Detection of high-frequency oscillations and microseizures could provide valuable insights into causes and therapies for the treatment of epilepsy, but requires high spatial and temporal resolution. Our group is currently using hybrid arrays composed of up to 320 micro- and clinical macroelectrode arrays sampled at 32 kHz per channel with 18-bits of A/D resolution. Such recordings produce approximately 3 terabytes of data per day. Existing file formats have limited data compression capabilities, and do not offer mechanisms for protecting patient identifying information or detecting data corruption during transmission or storage. We present a novel file format that employs range encoding to provide a high degree of data compression, a three-tiered 128-bit encryption system for patient information and data security, and a 32-bit cyclic redundancy check to verify the integrity of compressed data blocks. Open-source software to read, write, and process these files are provided.


Assuntos
Eletroencefalografia/estatística & dados numéricos , Fenômenos Eletrofisiológicos , Monitorização Fisiológica/estatística & dados numéricos , Algoritmos , Mapeamento Encefálico/estatística & dados numéricos , Segurança Computacional , Confidencialidade , Compressão de Dados , Eletrodos Implantados , Epilepsia/diagnóstico , Epilepsia/fisiopatologia , Humanos , Processamento de Sinais Assistido por Computador , Software
13.
Artigo em Inglês | MEDLINE | ID: mdl-19964266

RESUMO

The increasing use of high-frequency (kHz), long-duration (days) intracranial monitoring from multiple electrodes during pre-surgical evaluation for epilepsy produces large amounts of data that are challenging to store and maintain. Descriptive metadata and clinical annotations of these large data sets also pose challenges to simple, often manual, methods of data analysis. The problems of reliable communication of metadata and annotations between programs, the maintenance of the meanings within that information over long time periods, and the flexibility to re-sort data for analysis place differing demands on data structures and algorithms. Solutions to these individual problem domains (communication, storage and analysis) can be configured to provide easy translation and clarity across the domains. The Multi-scale Annotation Format (MAF) provides an integrated metadata and annotation environment that maximizes code reuse, minimizes error probability and encourages future changes by reducing the tendency to over-fit information technology solutions to current problems. An example of a graphical utility for generating and evaluating metadata and annotations for "big data" files is presented.


Assuntos
Eletroencefalografia/métodos , Eletrofisiologia/métodos , Processamento de Sinais Assistido por Computador , Algoritmos , Automação , Engenharia Biomédica/métodos , Compressão de Dados , Interpretação Estatística de Dados , Processamento Eletrônico de Dados , Eletrofisiologia/instrumentação , Humanos , Linguagens de Programação , Software
14.
J Neurosci Methods ; 180(1): 185-92, 2009 May 30.
Artigo em Inglês | MEDLINE | ID: mdl-19427545

RESUMO

The use of large-scale electrophysiology to obtain high spatiotemporal resolution brain recordings (>100 channels) capable of probing the range of neural activity from local field potential oscillations to single-neuron action potentials presents new challenges for data acquisition, storage, and analysis. Our group is currently performing continuous, long-term electrophysiological recordings in human subjects undergoing evaluation for epilepsy surgery using hybrid intracranial electrodes composed of up to 320 micro- and clinical macroelectrode arrays. DC-capable amplifiers, sampling at 32kHz per channel with 18-bits of A/D resolution are capable of resolving extracellular voltages spanning single-neuron action potentials, high frequency oscillations, and high amplitude ultra-slow activity, but this approach generates 3 terabytes of data per day (at 4 bytes per sample) using current data formats. Data compression can provide several practical benefits, but only if data can be compressed and appended to files in real-time in a format that allows random access to data segments of varying size. Here we describe a state-of-the-art, scalable, electrophysiology platform designed for acquisition, compression, encryption, and storage of large-scale data. Data are stored in a file format that incorporates lossless data compression using range-encoded differences, a 32-bit cyclically redundant checksum to ensure data integrity, and 128-bit encryption for protection of patient information.


Assuntos
Segurança Computacional , Coleta de Dados/métodos , Eletroencefalografia/métodos , Eletrofisiologia/métodos , Armazenamento e Recuperação da Informação , Monitorização Intraoperatória/métodos , Potenciais de Ação/fisiologia , Relógios Biológicos/fisiologia , Encéfalo/fisiologia , Encéfalo/cirurgia , Compressão de Dados/métodos , Eletrodos Implantados , Epilepsia/fisiopatologia , Epilepsia/cirurgia , Humanos , Sistemas de Informação , Neurônios/fisiologia , Processamento de Sinais Assistido por Computador , Software
15.
J Neurophysiol ; 99(5): 2431-42, 2008 May.
Artigo em Inglês | MEDLINE | ID: mdl-18322007

RESUMO

Although much is known about persistent molecular, cellular, and circuit changes associated with temporal lobe epilepsy, mechanisms of seizure onset remain unclear. The dentate gyrus displays many persistent epilepsy-related abnormalities and is in the mesial temporal lobe where seizures initiate in patients. However, little is known about seizure-related activity of individual neurons in the dentate gyrus. We used tetrodes to record action potentials of multiple, single granule cells before and during spontaneous seizures in epileptic pilocarpine-treated rats. Subsets of granule cells displayed four distinct activity patterns: increased firing before seizure onset, decreased firing before seizure onset, increased firing only after seizure onset, and unchanged firing rates despite electrographic seizure activity in the immediate vicinity. No cells decreased firing rate immediately after seizure onset. During baseline periods between seizures, action potential waveforms and firing rates were similar among the four subsets of granule cells in epileptic rats and in granule cells of control rats. The mean normalized firing rate of granule cells whose firing rates increased before seizure onset deviated from baseline earliest, beginning 4 min before dentate gyrus electrographic seizure onset, and increased progressively, more than doubling by seizure onset. It is generally assumed that neuronal firing rates increase abruptly and synchronously only when electrographic seizures begin. However, these findings show heterogeneous and gradually building changes in activity of individual granule cells minutes before spontaneous seizures.


Assuntos
Grânulos Citoplasmáticos/fisiologia , Epilepsia do Lobo Temporal/fisiopatologia , Neurônios/fisiologia , Convulsões/fisiopatologia , Potenciais de Ação/fisiologia , Animais , Giro Denteado/fisiopatologia , Eletrodos Implantados , Masculino , Ratos , Ratos Sprague-Dawley
16.
J Neurosci ; 25(6): 1313-23, 2005 Feb 09.
Artigo em Inglês | MEDLINE | ID: mdl-15703385

RESUMO

Learning sequences of events (e.g., a-b-c) is conceptually a simple problem that can be solved using asymmetrically linked cell assemblies [e.g., "phase sequences" (Hebb, 1949)], provided that the elements of the sequence are unique. When elements repeat within the sequence, however (e.g., a-b-c-d-b-e), the same element belongs to two separate "contexts," and a more complex sequence encoding mechanism is required to differentiate between the two contexts. Some neural structure must form sequential-context-dependent, or "differential," representations of the two contexts (i.e., b as an element of "a-b-c" as opposed to "d-b-e") to allow the correct choice to be made after the repeated element. To investigate the possible role of hippocampus in complex sequence encoding, rats were trained to remember repeated-location sequences under three conditions: (1) reward was given at each location; (2) during training, moveable barriers were placed at the entry and exit of the repeated segment to direct the rat and were removed once the sequence was learned; and (3) reward was withheld at the entry and exit of the repeated segment. In the first condition, hippocampal ensemble activity did not differentiate the sequential context of the repeated segment, indicating that complex sequences with repeated segments can be learned without differential encoding within the hippocampus. Differential hippocampal encoding was observed, however, under the latter two conditions, suggesting that long-term memory for discriminative cues present only during training, working memory of the most recently visited reinforcement sites, or anticipation of the subsequent reinforcement site can separate hippocampal activity patterns at the same location.


Assuntos
Hipocampo/fisiologia , Aprendizagem em Labirinto/fisiologia , Estimulação Acústica , Animais , Condicionamento Clássico/fisiologia , Cruzamentos Genéticos , Análise Discriminante , Estimulação Elétrica , Masculino , Microeletrodos , Estimulação Luminosa , Ratos , Ratos Endogâmicos BN , Ratos Endogâmicos F344 , Recompensa
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