Trends in low temperature and non-thermal technologies for the degradation of persistent organic pollutants.

The daunting effects of persistent organic pollutants on humans, animals, and the environment cannot be overemphasized. Their fate, persistence, long-range transport, and bioavailability have made them an environmental stressor of concern which has attracted the interest of the research community. Concerted efforts have been made by relevant organizations utilizing legislative laws to ban their production and get rid of them completely for the sake of public health. However, they have remained refractive in different compartments of the environment. Their bioavailability is majorly a function of different anthropogenic activities. Landfilling and incineration are among the earliest classical means of environmental remediation of waste; however, they are not sustainable due to the seepage of contaminants in landfills, the release of toxic gases into the atmosphere and energy requirements during incineration. Other advanced waste destruction technologies have been explored for the degradation of these recalcitrant pollutants; although, some are efficient, but are limited by high amounts of energy consumption, the use of organic solvents and hazardous chemicals, high capital and operational cost, and lack of public trust. Thus, this study has systematically reviewed different contaminant degradation technologies, their efficiency, and feasibility. Finally, based on techno-economic feasibility, non-invasiveness, efficiency, and environmental friendliness; radiation technology can be considered a viable alternative for the environmental remediation of contaminants in all environmental matrices at bench-, pilot-, and industrial-scale.

Separation of Azeotropic Hydrofluorocarbon Refrigerant Mixtures: Thermodynamic and Kinetic Modeling for Binary Adsorption of HFC-32 and HFC-125 on Zeolite 5A.

Hydrofluorocarbons (HFCs) have been used extensively as refrigerants over the past four decades; however, HFCs are currently being phased out due to large global warming potentials. As the next generation of hydrofluoroolefin refrigerants are phased in, action must be taken to responsibly and sustainably deal with the HFCs currently in circulation. Ideally, unused HFCs can be reclaimed and recycled; however, many HFCs in circulation are azeotropic or near-azeotropic mixtures and must be separated before recycling. Previously, pure gas isotherm data were presented for both HFC-125 (pentafluoroethane) and HFC-32 (difluoromethane) with zeolite 5A, and it was concluded that this zeolite could separate refrigerant R-410A (50/50 wt % HFC-125/HFC-32). To further investigate the separation capabilities of zeolite 5A, binary adsorption was measured for the same system using the Integral Mass Balance method. Zeolite 5A showed a selectivity of 9.6-10.9 for HFC-32 over the composition range of 25-75 mol % HFC-125. Adsorbed phase activity coefficients were calculated from binary adsorption data. The Spreading Pressure Dependent, modified nonrandom two-liquid, and modified Wilson activity coefficient models were fit to experimental data, and the resulting activity coefficient models were used in Real Adsorbed Solution Theory (RAST). RAST binary adsorption model predictions were compared with Ideal Adsorbed Solution Theory (IAST) predictions made using the Dual-Site Langmuir, Tóth, and Jensen and Seaton pure gas isotherm models. Both IAST and RAST yielded qualitatively accurate predictions; however, quantitative accuracy was greatly improved using RAST models. Diffusion behavior of HFC-125 and HFC-32 was also investigated by fitting the isothermal Fickian diffusion model to kinetic data. Molecular-level phenomena were investigated to understand both thermodynamic and kinetic behaviors.

Difluoromethane (HFC-32) and Pentafluoroethane (HFC-125) Sorption on Linde Type A (LTA) Zeolites for the Separation of Azeotropic Hydrofluorocarbon Refrigerant Mixtures.

Worldwide use of hydrofluorocarbons (HFCs) is currently being regulated and phased out because of high global warming potentials (GWPs). Separation techniques for recycling refrigerants are needed so that HFCs can be dealt with responsibly. Many HFCs currently in use are azeotropic or near-azeotropic refrigerant blends and must be separated so that the components can be recycled and repurposed effectively. One such refrigerant is R-410A, which is a near-azeotropic 50/50 wt % mixture of pentafluoroethane (HFC-125) and difluoromethane (HFC-32). This study examined the use of the LTA zeolites for separating HFC-32 from HFC-125. Pure gas isotherms were measured using a XEMIS gravimetric microbalance with zeolites 3A, 4A, and 5A. Reversible sorption was observed for HFC-32 with zeolites 4A and 5A, whereas irreversible sorption was observed for HFC-125 with zeolite 5A. Negligible sorption was observed for HFC-125 with zeolites 3A and 4A, and although sorption of HFC-32 with zeolite 3A was observed, the process was slow, making the sorbent not commercially viable. The enthalpy of adsorption was predicted using the vapor adsorption equilibrium (VAE) analogue of the Clausius-Clapeyron equation and measured using a calorimeter for HFC-125 and HFC-32 with zeolite 5A and for HFC-32 with zeolite 4A. Molecular-level interactions between the LTA zeolites and HFCs were discussed and used to interpret pure gas isotherms and enthalpy of adsorption results. Overall, zeolites 4A and 5A were found to be good candidates for kinetically and thermodynamically separating R-410A, respectively.

Protein Stabilization and Delivery: A Case Study of Invasion Plasmid Antigen D Adsorbed on Porous Silica.

Approximately half of all vaccines produced annually are wasted because effectivity is dependent on protein structure and heat exposure disrupts the intermolecular interactions needed to maintain the structure. Thus, most vaccines require a temperature-controlled supply chain to minimize waste. A more sustainable technology was developed via the adsorption of invasion plasmid antigen D (IpaD) onto mesoporous silica, improving the thermal stability of this protein-based therapeutic. Seven silicas were characterized to determine the effects of pore diameter, pore volume, and surface area on protein adsorption. The silica-IpaD complex was then heated above the IpaD denaturing temperature and N,N-dimethyldodecylamine N-oxide was used to remove IpaD from the silica. Circular dichroism confirmed that the adsorbed IpaD after the heat treatment maintained a native secondary structure rich in α-helix content. In contrast, the unprotected IpaD after heat treatment lost its secondary structure. Isotherms using Langmuir, Freundlich, and Temkin models demonstrated that the adsorption of IpaD onto silicas is best fit by the Langmuir model. If pores are less than 15 nm, adsorption is negligible. If the pores are between 15 and 25 nm, then monolayer coverage is achieved and IpaD is protected from thermal denaturing. If pores are larger than 25 nm, the adsorption is a multilayer coverage and it is easier to remove the protein from the silica because of a less-developed hydrogen bond network. This case study provides strong evidence that IpaD is thermally stabilized via adsorption on mesoporous silica with the proper range of pore sizes.

Development of Silica-Immobilized Vaccines for Improving Thermo-Tolerance and Shelf-Life.

INTRODUCTION: It is estimated that 50% of vaccines produced annually are wasted because effectivity is dependent on protein structure and heat exposure disrupts the intermolecular interactions that maintain this structure. Since 90% of vaccines require a temperature-controlled supply chain, it is necessary to create a cold chain system to minimize vaccine waste. We have developed a more sustainable technology via the adsorption of Invasion Plasmid Antigen D (IpaD) onto mesoporous silica gels, improving the thermal stability of protein-based therapeutics. METHODS: The solution depletion method using UV-Vis was utilized to study the adsorption of IpaD onto silica gels. The silica-IpaD complex is heated above the denaturing temperature of the protein and then the IpaD is removed using N,N-Dimethyldodecylamine N-oxide (LDAO) and their secondary structure is tested using circular dichroism (CD). RESULTS: Pore diameter, pore volume and surface area were characterized for seven different silica gels. Silica gels designated as 6389, 6378, and 6375 had an adsorption percentage above 95% at pore volumes of 2.2, 2.8 and 3.8 cm3 mg-1, respectively. CD analyses confirmed that the adsorbed IpaD after the heat treatment displayed a similar "W" shape CD signal as the native IpaD, indicating the conservation of α-helices. In contrast, the unprotected IpaD after being exposed to high temperature shows a flat CD signal, demonstrating the loss of secondary structure. CONCLUSION: We have successfully increased the thermo-tolerance for IpaD using mesoporous silica and continue to further optimize mesoporous silica's physiochemical properties to improve adsorption and desorption yields.

Targeted insertion of large DNA sequences by homology-directed repair or non-homologous end joining in engineered tobacco BY-2 cells using designed zinc finger nucleases.

Targeted integration of recombinant DNA fragments into plant genomes by DNA double-strand break (DSB) repair mechanisms has become a powerful tool for precision engineering of crops. However, many targeting platforms require the screening of many transgenic events to identify a low number of targeted events among many more random insertion events. We developed an engineered transgene integration platform (ETIP) that uses incomplete marker genes at the insertion site to enable rapid phenotypic screening and recovery of targeted events upon functional reconstitution of the marker genes. The two marker genes, encoding neomycin phosphotransferase II (nptII) and Discosoma sp. red fluorescent protein (DsRed) enable event selection on kanamycin-containing selective medium and subsequent screening for red fluorescent clones. The ETIP design allows targeted integration of donor DNA molecules either by homology-directed repair (HDR) or non-homologous end joining (NHEJ)-mediated mechanisms. Targeted donor DNA integration is facilitated by zinc finger nucleases (ZFN). The ETIP cassette was introduced into Nicotiana tabacum BY-2 suspension cells to generate target cell lines containing a single copy locus of the transgene construct. The utility of the ETIP platform has been demonstrated by targeting DNA constructs containing up to 25-kb payload. The success rate for clean targeted DNA integration was up to 21% for HDR and up to 41% for NHEJ based on the total number of calli analyzed by next-generation sequencing (NGS). The rapid generation of targeted events with large DNA constructs expands the utility of the nuclease-mediated gene addition platform both for academia and the commercial sector.

Targeted gene exchange in plant cells mediated by a zinc finger nuclease double cut.

Genome modification by homology-directed repair (HDR) is an attractive tool for the controlled genetic manipulation of plants. Here, we report the HDR-mediated gene exchange of expression cassettes in tobacco BY-2 cells using a designed zinc finger nuclease (ZFN). The target contained a 7-kb fragment flanked by two ZFN cutting sites. That fragment was replaced with a 4-kb donor cassette, which integrates gene markers for selection (kanamycin resistance) and for scoring targeting (red fluorescent protein, RFP). Candidates resulting from cassette exchange were identified by molecular analysis of calli generated by transformation via direct DNA delivery. The precision of HDR-mediated donor integration was evaluated by Southern blot analysis, sequencing of the integration locus and analysis of RFP fluorescence by flow cytometry. Screening of 1326 kanamycin-resistant calli yielded 18 HDR events, 16 of which had a perfect cassette exchange at the insert junction and 13 of which produced functional RFP. Our results demonstrate that ZFN-based HDR can be used for high frequency, precise, targeted exchange of fragments of sizes that are commercially relevant in plants.

Trait stacking via targeted genome editing.

Modern agriculture demands crops carrying multiple traits. The current paradigm of randomly integrating and sorting independently segregating transgenes creates severe downstream breeding challenges. A versatile, generally applicable solution is hereby provided: the combination of high-efficiency targeted genome editing driven by engineered zinc finger nucleases (ZFNs) with modular 'trait landing pads' (TLPs) that allow 'mix-and-match', on-demand transgene integration and trait stacking in crop plants. We illustrate the utility of nuclease-driven TLP technology by applying it to the stacking of herbicide resistance traits. We first integrated into the maize genome an herbicide resistance gene, pat, flanked with a TLP (ZFN target sites and sequences homologous to incoming DNA) using WHISKERS™-mediated transformation of embryogenic suspension cultures. We established a method for targeted transgene integration based on microparticle bombardment of immature embryos and used it to deliver a second trait precisely into the TLP via cotransformation with a donor DNA containing a second herbicide resistance gene, aad1, flanked by sequences homologous to the integrated TLP along with a corresponding ZFN expression construct. Remarkably, up to 5% of the embryo-derived transgenic events integrated the aad1 transgene precisely at the TLP, that is, directly adjacent to the pat transgene. Importantly and consistent with the juxtaposition achieved via nuclease-driven TLP technology, both herbicide resistance traits cosegregated in subsequent generations, thereby demonstrating linkage of the two independently transformed transgenes. Because ZFN-mediated targeted transgene integration is becoming applicable across an increasing number of crop species, this work exemplifies a simple, facile and rapid approach to trait stacking.