Reduction of large vessel traffic improves water quality and alters fish habitat-use throughout a large river.

Rivers are increasingly used as superhighways for the continental-scale transportation of freight goods, but the ecological impact of large vessel traffic on river ecosystems is difficult to study. Recently, the temporary maintenance closure of lock and dam systems on the Illinois Waterway (USA) brought commercial vessel traffic to a halt along the river's length, offering a rare opportunity to study the response of the ecosystem before, during, and after an extended pause of this persistent anthropogenic disturbance. We observed improvements in main- and side-channel water quality and a redistribution of fish habitat-use during a months-long, near-complete reduction of large vessel traffic. Over 3600 water quality and 1300 fish community samples indicate that large vessel traffic reduction coincided with a 33 % reduction in turbidity as well as increased use of sampling strata near vessel navigation corridors by sound-sensitive and rheophilic fishes. Gizzard shad (Dorosoma cepedianum), the most abundant species in the system, also expanded their use of these 'impact' areas. Though inland waterway transport is an economically- and climate-friendly alternative to trucking and rail for the shipment of freight, our data suggest that intense vessel traffic may have profound physical and biological impacts across a large river. Monitoring and mitigation of ecological impacts of the ongoing expansion of inland waterway transport around the world will be critical to balancing large rivers as both useful navigation corridors and functional ecosystems.

New records of Spotted Bass, Micropterus punctulatus, within the Mississippi River Basin, Illinois.

Spotted Bass Micropterus punctulatus, like many sport fishes, have experienced range expansion through intentional introductions (i.e., legal stocking and illegal transfers) and migration across the United States. In Illinois, USA, native populations of Spotted Bass occur along the eastern and southern border of the state. We report new records of Spotted Bass in their non-native range of the Illinois Waterway and the Illinois portion of the Upper Mississippi River in addition to collections in their native range in the Illinois sections of the Ohio and Wabash rivers to better understand their current distribution. Continuous, collaborative efforts to track the distribution and expansion of non-native fishes are important for maintaining and establishing native and non-native fisheries management objectives and education, as non-native fishes can influence native species population distribution and dynamics.

Ecosystem responses to aquatic invasive species management: A synthesis of two decades of bigheaded carp suppression in a large river.

The invasion of silver carp (Hypophthalmichthys molitrix) and bighead carp (H. nobilis) or "bigheaded carps" has caused extensive ecological and economic harm throughout the Mississippi River and its tributaries. To prevent their continued spread upstream toward the Great Lakes, intense commercial harvest was implemented on the Illinois River, a large tributary that connects the Mississippi River to Lake Michigan. Since implementation, harvest has reduced densities at the invasion front while also presenting an opportunity to generate a synthesis on ecosystem resilience in the face of accelerating invasion. Resilience, the ability of an ecosystem to recover after perturbation, was observed at local scales and within some taxa but has yet to manifest at a river-wide scale and often co-varied with abiotic environmental or seasonal factors. Thus, while intensive harvest has limited further spread of bigheaded carps, and evidence of additional secondary ecosystem benefits exists, opportunities remain to identify potential pathways that could spread such ecosystem benefits even farther.

Deployment of the 1st Area Medical Laboratory to South Korea in Response to the COVID-19 Pandemic.

In December 2019, an outbreak of pneumonia caused by a novel coronavirus, severe acute respiratory syndrome (SARS)-CoV-2, occurred in Wuhan city, Hubei province, China.1 South Korea saw its first confirmed Coronavirus Disease 2019 (COVID-19) case on January 20, 2020, when an infected woman from Wuhan, China arrived in S. Korea via Incheon International Airport.1 By mid-February, SARS-CoV-2 was rapidly spreading in the southern city of Daegu, S. Korea in proximity to three US Forces Korea (USFK) military installations. COVID-19 cases continued to increase during the following weeks, reaching a peak of nearly 1,000 confirmed cases per day by the end of February. As cases surged dramatically, over 28,000 USFK service members, family members, and Department of Defense (DoD) employees were at a risk of exposure to COVID-19. On February 24, clinicians diagnosed the first confirmed case in the USFK population, a 61 year-old widow of a retired service member. This individual, who experienced a mild illness, was the spouse of a retired US military veteran living in S. Korea. The retiree and his spouse both had access to military posts in S. Korea, and the spouse tested positive after she had been on one of the military bases in Area IV (Figure 1). The following day, USFK reported its first confirmed case in a service member, which was the triggering event for the 1st Area Medical Laboratory (AML) to deploy to S. Korea.

Proteomic profiling of HIV-infected T-cells by SWATH mass spectrometry.

Viral pathogenesis results from changes in host cells due to virus usurpation of the host cell and the innate cellular responses to thwart infection. We measured global changes in protein expression and localization in HIV-1 infected T-cells using subcellular fractionation and the Sequential Window Acquisition of all Theoretical Mass Spectra (SWATH-MS) proteomic platform. Eight biological replicates were performed in two independent experimental series. In silico merging of both experiments identified 287 proteins with altered expression (p < .05) between control and infected cells- 172 in the cytoplasm, 84 in the membrane, and 31 in nuclei. 170 of the proteins are components of the NIH HIV interaction database. Multiple Reaction Monitoring and traditional immunoblotting validated the altered expression of several factors during infection. Numerous factors were found to affect HIV infection in gain- and loss-of-expression infection assays, including the intermediate filament vimentin which was found to be required for efficient infection.

Freshwater mussel shells (Unionidae) chronicle changes in a North American river over the past 1000years.

The Illinois River was substantially altered during the 20th century with the installation of navigational locks and dams, construction of extensive levee networks, and degradation of water quality. Freshwater mussels were affected by these changes. We used sclerochronology and stable isotopes to evaluate changes over time in age-and-growth and food sources for two mussel species: Amblema plicata and Quadrula quadrula. Specimens were collected in years 1894, 1897, 1909, 1912, 1966, and 2013, and archeological specimens were collected circa 850. The von Bertalanffy growth parameter (K) was similar between 850 and 1897, but it increased by 1912 and remained elevated through 2013. Predicted maximum size (Linf) increased over the past millennium, and 2013 individuals were over 50% larger than in 850. Growth indices showed similar patterns of continual increases in growth. Shells were enriched in 13C and 15N during the 20th century, but exhibited a partial return to historical conditions by 2013. These patterns are likely attributable to impoundment, nutrient pollution and eutrophication beginning in the early 20th century followed by recent water quality improvement.

Cyclophilin B enhances HIV-1 infection.

Cyclophilin B (CypB) is a member of the immunophilin family and intracellular chaperone. It predominantly localizes to the ER, but also contains a nuclear localization signal and is secreted from cells. CypB has been shown to interact with the Gag protein of human immunodeficiency type 1 (HIV-1). Several proteomic and genetic studies identified it as a potential factor involved in HIV replication. Herein, we show that over-expression of CypB enhances HIV infection by increasing nuclear import of viral DNA. This enhancement was unaffected by cyclosporine treatment and requires the N-terminus of the protein. The N-terminus contains an ER leader sequence, putative nuclear localization signal, and is required for secretion. Deletion of the N-terminus resulted in mislocalization from the ER and suppression of HIV infection. Passive transfer experiments showed that secreted CypB did not impact HIV infection. Combined, these experiments show that intracellular CypB modulates a pathway of HIV nuclear import.

Alterations in the nuclear proteome of HIV-1 infected T-cells.

Virus infection of a cell involves the appropriation of host factors and the innate defensive response of the cell. The identification of proteins critical for virus replication may lead to the development of novel, cell-based inhibitors. In this study we mapped the changes in T-cell nuclei during human immunodeficiency virus type 1 (HIV-1) at 20 hpi. Using a stringent data threshold, a total of 13 and 38 unique proteins were identified in infected and uninfected cells, respectively, across all biological replicates. An additional 15 proteins were found to be differentially regulated between infected and control nuclei. STRING analysis identified four clusters of protein-protein interactions in the data set related to nuclear architecture, RNA regulation, cell division, and cell homeostasis. Immunoblot analysis confirmed the differential expression of several proteins in both C8166-45 and Jurkat E6-1 T-cells. These data provide a map of the response in host cell nuclei upon HIV-1 infection.