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1.
J Photochem Photobiol B ; 68(2-3): 123-32, 2002 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-12468207

RESUMO

The total synthesis of tetra(4-carboranylphenyl)porphyrins 4 and 6 and their zinc(II) complexes 5 and 7 are described. These compounds were characterized by analytical and spectroscopic methods and, in the case of 5, by X-ray crystallography. The water-soluble nido-carboranylporphyrins 6 and 7 were found to have low dark toxicity towards V79 hamster lung fibroblast cells, using a clonogenic assay (50% colony survival, CS(50)>300 microM). Upon light activation nido-carboranylporphyrin 6 effectively induced DNA damage in vitro. Two different methods were used to assess the extent of DNA damage: the super-coiled to nicked DNA and the alkaline Comet assay using human leukemia K562 cells. Significant PDT-induced DNA damage was observed for porphyrin 6 using both assays, compared to light-only and porphyrin-only experiments. It is concluded that this type of nido-carboranylporphyrin is a promising sensitizer for both the boron neutron capture therapy and the photodynamic therapy of tumors.


Assuntos
Dano ao DNA/efeitos dos fármacos , Fármacos Fotossensibilizantes/química , Fármacos Fotossensibilizantes/toxicidade , Porfirinas/química , Porfirinas/toxicidade , Animais , Linhagem Celular , Sobrevivência Celular/efeitos dos fármacos , Cricetinae , Cristalografia por Raios X , Escuridão , Indicadores e Reagentes , Pulmão/efeitos dos fármacos , Pulmão/patologia , Modelos Moleculares , Conformação Molecular , Fármacos Fotossensibilizantes/síntese química , Porfirinas/síntese química
2.
Chem Res Toxicol ; 14(10): 1371-7, 2001 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-11599928

RESUMO

Exposure to airborne fine particles (PM2.5) is implicated in excess of 50 000 yearly deaths in the USA as well as a number of chronic respiratory illnesses. Despite intense interest in the toxicity of PM2.5, the mechanisms by which it causes illnesses are poorly understood. Since the principal source of airborne fine particles is combustion and combustion sources generate free radicals, we suspected that PM2.5 may contain radicals. Using electron paramagnetic resonance (EPR), we examined samples of PM2.5 and found large quantities of radicals with characteristics similar to semiquinone radicals. Semiquinone radicals are known to undergo redox cycling and ultimately produce biologically damaging hydroxyl radicals. Aqueous extracts of PM2.5 samples induced damage to DNA in human cells and supercoiled phage DNA. PM2.5-mediated DNA damage was abolished by superoxide dismutase, catalase, and deferoxamine, implicating superoxide radical, hydrogen peroxide, and the hydroxyl radical in the reactions inducing DNA damage.


Assuntos
Poluentes Atmosféricos/toxicidade , Dano ao DNA , DNA Super-Helicoidal/efeitos dos fármacos , Radicais Livres/toxicidade , Bacteriófagos , Catalase/metabolismo , Ensaio Cometa , Desferroxamina/química , Espectroscopia de Ressonância de Spin Eletrônica , Monitoramento Ambiental , Radicais Livres/química , Humanos , Peróxido de Hidrogênio/química , Leucemia Mieloide , Oxidantes/química , Tamanho da Partícula , Superóxido Dismutase/metabolismo , Células Tumorais Cultivadas
3.
Mutagenesis ; 16(5): 439-42, 2001 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-11507244

RESUMO

Although phenobarbital, oxazepam and Wyeth 14,643 are carcinogens that do not form DNA adducts, they induce mutations in the Big Blue transgenic mouse model. The mutations produced by these compounds were predominantly G-->T and G-->C transversions that we suspect arose from oxidative damage to DNA. To test this, we employed the single cell electrophoresis (Comet) assay that detects alkali-labile lesions in cells sustaining DNA damage. Human myeloid leukemia K562 cells were treated with non-cytotoxic doses of the above compounds for 3 h, then placed on slides containing low melting point agarose. Cells were lysed, exposed to alkaline buffer, electrophoresed and analyzed by microscopy for the existence of DNA damage. Extensive DNA damage, most likely due to the existence of single- and double-strand breaks and apurinic/apyrimidinic (AP) sites, was observed in cells exposed to oxazepam (1 mM) and Wyeth 14,643 (0.5 mM). On the other hand, damage of this sort was not observed in cells exposed to phenobarbital (1 mM). However, the addition of S9 liver extracts to cells exposed in the presence of phenobarbital resulted in significant amounts of DNA damage. We conclude from these studies that two of the three compounds evaluated in this study mediate their mutagenic effects through oxidative stress, but that the mechanism of DNA damage caused by phenobarbital differs from that elicited by oxazepam and Wyeth 14,643.


Assuntos
Carcinógenos/toxicidade , Ensaio Cometa/métodos , Dano ao DNA/efeitos dos fármacos , Hipnóticos e Sedativos/toxicidade , Oxazepam/toxicidade , Pirimidinas/toxicidade , Humanos , Células K562 , Fenobarbital/toxicidade , Células Tumorais Cultivadas
4.
Nucleic Acids Res ; 29(14): 3116-22, 2001 Jul 15.
Artigo em Inglês | MEDLINE | ID: mdl-11452037

RESUMO

Reactive oxygen species (ROS) arise through normal cellular aerobic respiration, and, in combination with external sources such as ionizing radiation, cigarette tar and smoke, and particulate matter generated by combustion, can have a profound negative effect on cellular macromolecules such as DNA that may lead to a number of human pathological disorders including accelerated aging and cancer. A major end product of ROS damage to DNA is the formation of apurinic/apyrimidinic (AP) sites, which without removal are known to halt mRNA and DNA synthesis, or act as non-coding lesions resulting in the increased generation of DNA mutations. In human cells, the major enzyme in correcting the deleterious effects of AP sites in DNA is through the participation of AP endonuclease (APE), which initiates the removal of baseless sites in DNA through the catalytic scission of the phosphodiester bond 5' and adjacent to an AP site. Interestingly, APE also possesses an activity (Ref-1) that controls the redox status of a number of transcription factors including Fos and Jun. The means by which APE/Ref-1 is directed to carry out such disparate roles are unknown. The presence of a number of phosphorylation sites scattered throughout both functional domains of APE/Ref-1 however offered one possible mechanism that we reasoned could play a role in dictating how this protein responds to different stimuli. Here we show that the in vitro redox activity of APE/Ref-1 is stimulated by PKC phosphorylation. Furthermore, when human cells were exposed to the PKC activator phorbol 12-myristate 13-acetate, an increase in redox activity was observed that corresponded to an increase in the phosphorylation status of APE/Ref-1. Importantly, human cells exposed to the oxidizing agent hypochlorite, followed by methyl methanesulfanate, responded with an increase in redox activity by APE/Ref-1 that also involved an increase in PKC activity and a corresponding increase in the phosphorylation of APE/Ref-1. These results suggest that the ability of APE/Ref-1 to perform its in vivo redox function is correlated to its susceptibility to PKC phosphorylation that notably occurs in response to DNA damaging agents.


Assuntos
Carbono-Oxigênio Liases/metabolismo , DNA Liase (Sítios Apurínicos ou Apirimidínicos) , Proteína Quinase C/metabolismo , Espécies Reativas de Oxigênio/metabolismo , Dano ao DNA , Ativação Enzimática , Humanos , Ácido Hipocloroso/farmacologia , Células K562 , Metanossulfonato de Metila/farmacologia , Oxirredução , Fosforilação/efeitos dos fármacos , Acetato de Tetradecanoilforbol/farmacologia
5.
J Biol Chem ; 276(29): 27591-6, 2001 Jul 20.
Artigo em Inglês | MEDLINE | ID: mdl-11353770

RESUMO

The Drosophila S3 ribosomal protein has important roles in both protein translation and DNA repair. In regards to the latter activity, it has been shown that S3 contains vigorous N-glycosylase activity for the removal of 8-oxoguanine residues in DNA that leaves baseless sites in their places. Drosophila S3 also possesses an apurinic/apyrimidinic (AP) lyase activity in which the enzyme catalyzes a beta-elimination reaction that cleaves phosphodiester bonds 3' and adjacent to an AP lesion in DNA. In certain situations, this is followed by a delta-elimination reaction that ultimately leads to the formation of a single nucleotide gap in DNA bordered by 5'- and 3'-phosphate groups. The human S3 protein, although 80% identical to its Drosophila homolog and shorter by only two amino acids, has only marginal N-glycosylase activity. Its lyase activity only cleaves AP DNA by a beta-elimination reaction, thus further distinguishing itself from the Drosophila S3 protein in lacking a delta-elimination activity. Using a hidden Markov model analysis based on the crystal structures of several DNA repair proteins, the enzymatic differences between Drosophila and human S3 were suggested by the absence of a conserved glutamine residue in human S3 that usually resides at the cleft of the deduced active site pocket of DNA glycosylases. Here we show that the replacement of the Drosophila glutamine by an alanine residue leads to the complete loss of glycosylase activity. Unexpectedly, the delta-elimination reaction at AP sites was also abrogated by a change in the Drosophila glutamine residue. Thus, a single amino acid change converted the Drosophila activity into one that is similar to that possessed by the human S3 protein. In support of this were experiments executed in vivo that showed that human S3 and the Drosophila site-directed glutamine-changed S3 performed poorly when compared with Drosophila wild-type S3 and its ability to protect a bacterial mutant from the harmful effects of DNA-damaging agents.


Assuntos
Reparo do DNA , Guanina/análogos & derivados , Guanina/metabolismo , Proteínas Ribossômicas/metabolismo , Sequência de Aminoácidos , Substituição de Aminoácidos , Animais , Sequência de Bases , Boroidretos/química , Catálise , DNA/metabolismo , Dano ao DNA , Primers do DNA , Drosophila , Humanos , Mutagênese Sítio-Dirigida , Mutagênicos/toxicidade , Proteínas Ribossômicas/química , Proteínas Ribossômicas/genética , Homologia de Sequência de Aminoácidos
6.
Mutat Res ; 485(2): 107-19, 2001 Mar 07.
Artigo em Inglês | MEDLINE | ID: mdl-11182542

RESUMO

Cells harvested from Fanconi anemia (FA) patients show an increased hypersensitivity to the multifunctional DNA damaging agent mitomycin C (MMC), which causes cross-links in DNA as well as 7,8-dihydro-8-oxoguanine (8-oxoG) adducts indicative of escalated oxidative DNA damage. We show here that the Drosophila multifunctional S3 cDNA, which encodes an N-glycosylase/apurinic/apyrimidinic (AP) lyase activity was found to correct the FA Group A (FA(A)) and FA Group C (FA(C)) sensitivity to MMC and hydrogen peroxide (H2O2). Furthermore, the Drosophila S3 cDNA was shown to protect AP endonuclease deficient E. coli cells against H(2)O(2) and MMC, and also protect 8-oxoG repair deficient mutM E. coli strains against MMC and H2O2 cell toxicity. Conversely, the human S3 protein failed to complement the AP endonuclease deficient E. coli strain, most likely because it lacks N-glycosylase activity for the repair of oxidatively-damaged DNA bases. Although the human S3 gene is clearly not the genetic alteration in FA cells, our results suggest that oxidative DNA damage is intimately involved in the overall FA phenotype, and the cytotoxic effect of selective DNA damaging agents in FA cells can be overcome by trans-complementation with specific DNA repair cDNAs. Based on these findings, we would predict other oxidative repair proteins, or oxidative scavengers, could serve as protective agents against the oxidative DNA damage that occurs in FA.


Assuntos
Carbono-Oxigênio Liases/metabolismo , DNA Complementar/farmacologia , Proteínas de Escherichia coli , Anemia de Fanconi/metabolismo , Guanina/análogos & derivados , Proteínas Ribossômicas/metabolismo , Animais , Antígenos CD34/metabolismo , Carbono-Oxigênio Liases/deficiência , Carbono-Oxigênio Liases/genética , Sobrevivência Celular/efeitos dos fármacos , Células Cultivadas , Reagentes de Ligações Cruzadas/farmacologia , Dano ao DNA/efeitos dos fármacos , Dano ao DNA/genética , Reparo do DNA/efeitos dos fármacos , DNA Complementar/genética , DNA Complementar/metabolismo , DNA Liase (Sítios Apurínicos ou Apirimidínicos) , DNA-Formamidopirimidina Glicosilase , Desoxirribonuclease IV (Fago T4-Induzido) , Drosophila , Escherichia coli/efeitos dos fármacos , Escherichia coli/genética , Escherichia coli/metabolismo , Anemia de Fanconi/genética , Técnicas de Transferência de Genes , Teste de Complementação Genética , Guanina/metabolismo , Células-Tronco Hematopoéticas/citologia , Células-Tronco Hematopoéticas/efeitos dos fármacos , Células-Tronco Hematopoéticas/metabolismo , Humanos , Peróxido de Hidrogênio/farmacologia , Leucócitos Mononucleares/citologia , Leucócitos Mononucleares/metabolismo , Mitomicina/farmacologia , N-Glicosil Hidrolases/deficiência , N-Glicosil Hidrolases/metabolismo , Oxirredução/efeitos dos fármacos , Retroviridae/genética , Proteínas Ribossômicas/farmacologia
7.
DNA Cell Biol ; 19(3): 149-56, 2000 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-10749167

RESUMO

The Drosophila S3 protein is known to be associated with ribosomes, where it is thought to play a role in the initiation of protein translation. The S3 protein also contains a DNA repair activity, efficiently processing 8-oxoguanine residues in DNA via an N-glycosylase/apurinic-apyrimidinic (AP) lyase activity. The gene that encodes S3 has previously been localized to one of the Minute loci on chromosome 3 in Drosophila. This study focused on the genomic organization of S3 at M(3)95A, initial promoter characterization, and analysis of three mutant alleles at this locus. The S3 gene was found to be a single-copy gene 2 to 3 kb in length and containing a single intron. The upstream 1.6-kb region was analyzed for promoter activity, identifying a presumptive regulatory domain containing potential enhancer and suppressor elements. This finding is of interest, as the S3 gene is constitutively expressed throughout development and mRNA is most likely maternally inherited. Lastly, three Minute alleles from the same locus were sequenced and two alleles found to contain a 22-bp deletion in exon 2, resulting in a truncated S3 protein, although wildtype levels of S3 mRNA and protein were detected in the viable heterozygous Minute alleles, possibly reflecting dosage compensation.


Assuntos
Reparo do DNA/genética , Drosophila/genética , Proteínas Ribossômicas/genética , Alelos , Sequência de Aminoácidos , Animais , Sequência de Bases , Clonagem Molecular , Drosophila/embriologia , Éxons , Biblioteca Genômica , Íntrons , Dados de Sequência Molecular , Mutagênese , Regiões Promotoras Genéticas , Biossíntese de Proteínas , Proteínas Recombinantes/biossíntese , Mapeamento por Restrição , Ribossomos/metabolismo , Deleção de Sequência , Transcrição Gênica
9.
J Biol Chem ; 273(2): 756-62, 1998 Jan 09.
Artigo em Inglês | MEDLINE | ID: mdl-9422728

RESUMO

A dose-limiting toxicity of certain chemotherapeutic alkylating agents is their toxic effects on nontarget tissues such as the bone marrow. To overcome the myelosuppression observed by chemotherapeutic alkylating agents, one approach is to increase the level of DNA repair proteins in hematopoietic stem and progenitor cells. Toward this goal, we have constructed a human fusion protein consisting of O6-methylguanine DNA methyltransferase coupled with an apurinic endonuclease, resulting in a fully functional protein for both O6-methylguanine and apurinic/apyrimidinic (AP) site repair as determined by biochemical analysis. The chimeric protein protected AP endonuclease-deficient Escherichia coli cells against methyl methanesulfonate and hydrogen peroxide (H2O2) damage. A retroviral construct expressing the chimeric protein also protected HeLa cells against 1,3-bis(2-chloroethyl)-1-nitrosourea and methyl methanesulfonate cytotoxicity either when these agents were used separately or in combination. Moreover, as predicted from previous analysis, truncating the amino 150 amino acids of the apurinic endonuclease portion of the O6-methylguanine DNA methyltransferase-apurinic endonuclease protein resulted in the retention of O6-methylguanine DNA methyltransferase activity but loss of all AP endonuclease activity. These results demonstrate that the fusion of O6-methylguanine DNA methyltransferase and apurinic endonuclease proteins into a combined single repair protein can result in a fully functional protein retaining the repair activities of the individual repair proteins. These and other related constructs may be useful for protection of sensitive tissues and, therefore, are candidate constructs to be tested in preclinical models of chemotherapy toxicity.


Assuntos
Carbono-Oxigênio Liases/genética , Reparo do DNA , Proteínas de Escherichia coli , O(6)-Metilguanina-DNA Metiltransferase/genética , Proteínas Recombinantes de Fusão/genética , Antineoplásicos/efeitos adversos , Clonagem Molecular , DNA Liase (Sítios Apurínicos ou Apirimidínicos) , Desoxirribonuclease IV (Fago T4-Induzido) , Escherichia coli/genética , Células HeLa , Humanos
10.
J Biol Chem ; 272(28): 17480-4, 1997 Jul 11.
Artigo em Inglês | MEDLINE | ID: mdl-9211893

RESUMO

The Drosophila ribosomal protein S3 has been previously demonstrated to cleave DNA containing 8-oxoguanine residues and has also been found to contain an associated apurinic/apyrimidinic (AP) lyase activity that cleaves phosphodiester bonds via a beta, delta-elimination reaction. The activity of this protein on DNA substrates containing incised AP sites was examined. A glutathione S-transferase fusion protein of S3 was found to efficiently remove sugar-phosphate residues from DNA substrates containing 5'-incised AP sites as well as from DNA substrates containing 3'-incised sites. Removal of 2-deoxyribose-5-phosphate as 4-hydroxy-2-pentenal-5-phosphate from a substrate containing 5'-incised AP sites occurred via a beta-elimination reaction, as indicated by reaction of the released sugar-phosphate products with sodium thioglycolate. The reaction for the removal of 4-hydroxy-2-pentenal-5-phosphate from the substrate containing 3'-incised AP sites was dependent on the presence of the Mg2+ cation. These findings suggest that the S3 ribosomal protein may function in several steps of the DNA base excision repair pathway in eukaryotes and may represent an important DNA repair function for the repair of oxidative and ionizing radiation-induced DNA damage.


Assuntos
Diester Fosfórico Hidrolases/metabolismo , Proteínas Ribossômicas/metabolismo , Animais , DNA/metabolismo , Reparo do DNA , DNA Liase (Sítios Apurínicos ou Apirimidínicos) , Desoxirribonuclease IV (Fago T4-Induzido) , Desoxirribose/metabolismo , Drosophila , Hidrólise , Cinética , Liases/metabolismo , Magnésio/metabolismo , Modelos Químicos
11.
Nucleic Acids Res ; 25(22): 4557-61, 1997 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-9358166

RESUMO

The yeast OGG1 gene was recently cloned and shown to encode a protein that possesses N-glycosylase/AP lyase activities for the repair of oxidatively damaged DNA at sites of 7,8-dihydro-8-oxoguanine (8-oxoguanine). Similar activities have been identified for Escherichia coli formamidopyrimidine-DNA glycosylase (Fpg) and Drosophila ribosomal protein S3. Both Fpg and S3 also contain a deoxyribophosphodiesterase (dRpase) activity that removes 2-deoxyribose-5-phosphate at an incised 5' apurinic/apyrimidinic (AP) sites via a beta-elimination reaction. Drosophila S3 also has an additional activity that removes trans-4-hydroxy-2-pentenal-5-phosphate at a 3' incised AP site by a Mg2+-dependent hydrolytic mechanism. In view of the substrate similarities between Ogg1, Fpg and S3 at the level of base excision repair, we examined whether Ogg1 also contains dRpase activities. A glutathione S-transferase fusion protein of Ogg1 was purified and subsequently found to efficiently remove sugar-phosphate residues at incised 5' AP sites. Activity was also detected for the Mg2+-dependent removal of trans -4-hydroxy-2-pentenal-5-phosphate at 3' incised AP sites and from intact AP sites. Previous studies have shown that DNA repair proteins that possess AP lyase activity leave an inefficient DNA terminus for subsequent DNA synthesis steps associated with base excision repair. However, the results presented here suggest that in the presence of MgCl2, Ogg1 can efficiently process 8-oxoguanine so as to leave a one nucleotide gap that can be readily filled in by a DNA polymerase, and importantly, does not therefore require additional enzymes to process trans -4-hydroxy-2-pentenal-5-phosphate left at a 3' terminus created by a beta-elimination catalyst.


Assuntos
DNA Viral/metabolismo , Proteínas de Escherichia coli , N-Glicosil Hidrolases/metabolismo , Diester Fosfórico Hidrolases/metabolismo , Saccharomyces cerevisiae/enzimologia , Animais , Ácido Apurínico , Bacteriófago M13/genética , Sítios de Ligação , DNA-Formamidopirimidina Glicosilase , Desoxirribose/metabolismo , Drosophila/enzimologia , Glutationa Transferase , Cinética , N-Glicosil Hidrolases/genética , Fosfatos/metabolismo , Diester Fosfórico Hidrolases/genética , Polinucleotídeos , Proteínas Recombinantes de Fusão/genética , Proteínas Recombinantes de Fusão/metabolismo , Ribose/metabolismo , Especificidade por Substrato
12.
J Biol Chem ; 272(52): 32857-60, 1997 Dec 26.
Artigo em Inglês | MEDLINE | ID: mdl-9407063

RESUMO

We recently demonstrated that Drosophila ribosomal protein S3 specifically cleaved duplex oligodeoxynucleotides at sites of 7,8-dihydro-8-oxoguanine (8-oxoGua), presumably due to S3 protein possessing an N-glycosylase activity that is associated with its known apurinic/apyrimidinic (AP) lyase activity. Here we show, using DNA substrates prepared by gamma-irradiation under N2O and analyzed by gas chromatography/isotope-dilution mass spectrometry, that S3 protein efficiently liberates 8-oxoGua as a free base from the damaged DNA substrate. Of the 15 additional modified bases present in the DNA substrate, the only other one acted on by S3 protein was 2,6-diamino-4-hydroxy-5-formamidopyrimidine (FapyGua). Specificity constants measured for the removal of 8-oxoGua and FapyGua indicate that S3 protein has a similar preference for both of these modified purines. Having established that S3 protein contains an N-glycosylase activity, we next examined the repair of duplex oligonucleotides containing 8-oxoGua (8-oxoGua-37-mer) positioned opposite Cyt, Gua, Thy, or Ade. Significant cleavage of the 8-oxoGua-37-mer was only detected for an opposing Cyt. Moreover, we show that an imino covalent enzyme-substrate intermediate is formed between S3 protein and 8-oxoGua-37-mer, a result similar to other DNA repair enzymes that catalyze N-glycosylase/AP lyase-type reactions at sites of DNA damage.


Assuntos
Dano ao DNA , Reparo do DNA , N-Glicosil Hidrolases/metabolismo , Proteínas Ribossômicas/metabolismo , Animais , DNA Glicosilases , Drosophila , Cromatografia Gasosa-Espectrometria de Massas , Guanina/análogos & derivados , Guanina/metabolismo , Oxirredução , Pirimidinas/metabolismo , Especificidade por Substrato
13.
Cancer Res ; 57(24): 5457-9, 1997 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-9407949

RESUMO

The human DNA repair protein apurinic/apyrimidinic endonuclease (APE) is a dual-function protein that has important roles in both the repair of baseless sites that arise in DNA and in regulating the redox state of a number of proteins (Ref-1). Although previous attention has been focused on how the human APE/Ref-1 gene may be regulated at the DNA level, we have instead examined if APE/Ref-1 is phosphorylated, and if so how it may affect DNA repair activity. We demonstrate here that APE/Ref-1 is indeed a substrate for phosphorylation by the serine/threonine casein kinases (CK) I and II and protein kinase C. Notably, although phosphorylation by CKI and protein kinase C had no effect whatsoever on the ability of APE/Ref-1 to act at abasic sites in DNA, phosphorylation by CKII completely abolished DNA repair activity. That phosphorylation was responsible for the loss of abasic repair activity was concluded from experiments showing that inactive APE/Ref-1 could be reversed to an active DNA repair protein with phosphatase treatment. These results may help to explain the mechanism by which APE/Ref-1 switches from one unrelated function to another.


Assuntos
Carbono-Oxigênio Liases/metabolismo , Reparo do DNA/fisiologia , Proteínas Nucleares/metabolismo , Sítios de Ligação , Caseína Quinase II , Caseína Quinases , DNA/metabolismo , DNA Liase (Sítios Apurínicos ou Apirimidínicos) , Desoxirribonuclease IV (Fago T4-Induzido) , Ativação Enzimática , Humanos , Fosforilação , Proteínas Quinases/metabolismo , Proteínas Serina-Treonina Quinases/metabolismo
14.
Nucleic Acids Res ; 24(21): 4298-303, 1996 Nov 01.
Artigo em Inglês | MEDLINE | ID: mdl-8932386

RESUMO

Drosophila ribosomal protein PO was overexpressed in Escherichia coli to allow for its purification, biochemical characterization and to generate polyclonal antibodies for Western analysis. Biochemical tests were originally performed to see if overexpressed PO contained DNase activity similar to that recently reported for the apurinic/apyrimidinic (AP) lyase activity associated with Drosophila ribosomal protein S3. The overexpressed ribosomal protein was subsequently found to act on AP DNA, producing scissions that were in this case 5' of a baseless site instead of 3', as has been observed for S3. As a means of confirming that the source of AP endonuclease activity was in fact due to PO, glutathione S-transferase (GST) fusions containing a Factor Xa cleavage site between GST and PO were constructed, overexpressed in an E.coli strain defective for the major 5'-acting AP endonucleases and the fusions purified using glutathione-agarose affinity column chromatography. Isolated fractions containing purified GST-PO fusion proteins were subsequently found to have authentic AP endonuclease activity. Moreover, glutathione-agarose was able to deplete AP endonuclease activity from GST-PO fusion protein preparations, whereas the resin was ineffective in lowering DNA repair activity for PO that had been liberated from the fusion construct by Factor Xa cleavage. These results suggested that PO was a multifunctional protein with possible roles in DNA repair beyond its known participation in protein translation. In support of this notion, tests were performed that show that GST-PO, but not GST, was able to rescue an E.coli mutant lacking the major 5'-acting AP endonucleases from sensitivity to an alkylating agent. We furthermore show that GST-PO can be located in both the nucleus and ribosomes. Its nuclear location can be further traced to the nuclear matrix, thus placing PO in a subcellular location where it could act as a DNA repair protein. Other roles beyond DNA repair seem possible, however, since GST-PO also exhibited significant nuclease activity for both single- and double-stranded DNA.


Assuntos
Proteínas de Drosophila , Proteínas de Escherichia coli , Hormônios de Inseto/metabolismo , Liases/metabolismo , Proteínas Ribossômicas/metabolismo , Animais , Anticorpos/imunologia , Western Blotting , DNA/metabolismo , DNA Liase (Sítios Apurínicos ou Apirimidínicos) , Desoxirribonuclease IV (Fago T4-Induzido) , Drosophila melanogaster , Escherichia coli , Glutationa Transferase/genética , Glutationa Transferase/metabolismo , Hormônios de Inseto/genética , Hormônios de Inseto/imunologia , Liases/genética , Mutação , Matriz Nuclear/metabolismo , Proteínas Recombinantes de Fusão/metabolismo , Proteínas Ribossômicas/genética
15.
EMBO J ; 15(9): 2306-12, 1996 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-8641296

RESUMO

Ionizing radiation and normal cellular respiration form reactive oxygen species that damage DNA and contribute to a variety of human disorders including tumor promotion and carcinogenesis. A major product of free radical DNA damage is the formation of 8-oxoguanine, which is a highly mutagenic base modification produced by oxidative stress. Here, Drosophila ribosomal protein S3 is shown to cleave DNA containing 8-oxoguanine residues efficiently, The ribosomal protein also contains an associated apurinic/apyrimidinic (AP) lyase activity, cleaving phosphodiester bonds via a beta,delta elimination reaction. The significance of this DNA repair activity acting on 8-oxoguanine is shown by the ability of S3 to rescue the H2O2 sensitivity of an Escherichia coli mutM strain (defective for the repair of 8-oxoguanine) and to abolish completely the mutator phenotype of mutM caused by 8-oxoguanine-mediated G-->T transversions. The ribosomal protein is also able to rescue the alkylation sensitivity of an E.coli mutant deficient for the AP endonuclease activities associated with exonuclease III (xth) and endonuclease IV (nfo), indicating for the first time that an AP lyase can represent a significant source of DNA repair activity for the repair of AP sites. These results raise the possibility that DNA repair may be associated with protein translation.


Assuntos
Reparo do DNA , Drosophila/metabolismo , Proteínas de Escherichia coli , Guanina/análogos & derivados , Proteínas Ribossômicas/metabolismo , Animais , Sequência de Bases , DNA Liase (Sítios Apurínicos ou Apirimidínicos) , DNA-Formamidopirimidina Glicosilase , Desoxirribonuclease IV (Fago T4-Induzido) , Escherichia coli/genética , Teste de Complementação Genética , Glutationa Transferase/genética , Guanina/metabolismo , Liases/metabolismo , Dados de Sequência Molecular , N-Glicosil Hidrolases/genética , Oligodesoxirribonucleotídeos , Proteínas Ribossômicas/genética
16.
Mutat Res ; 362(3): 237-48, 1996 Apr 02.
Artigo em Inglês | MEDLINE | ID: mdl-8637502

RESUMO

The multifunctional mammalian apurinic/apyrimidinic (AP) endonuclease is responsible for the repair of AP sites in DNA. In addition, this enzyme has been shown to function as a redox factor facilitating the DNA binding capability of Jun-Jun homodimers and Fos-Jun heterodimers by altering their redox state and to be involved in calcium mediated transcriptional repression of the parathyroid hormone gene. Previous studies examining the tissue specific distribution of the AP endonuclease (APE) transcript and protein by Northern analysis and enzymatic assays, respectively, have shown that this gene is expressed in all tissues at relatively similar levels. In the current study, adult and fetal rat tissue sections were examined for the expression of the APE transcript in specific subpopulations of cells and during development by in situ hybridization. In the adult brain, the APE transcript showed a widespread, but heterogeneous pattern of expression. Predominant levels of transcript were detected in the suprachiasmatic nuclei, the supraoptic and paraventricular nuclei, the hippocampus and the cerebellum. During fetal development, transcript was detected in all somatic sites examined with very high levels in the thymus, liver and developing brain. Examination of the adult testis indicated that the expression of the transcript varies with the stage of spermatogenesis with the highest levels being present over round spermatids. These results provide evidence that the APE gene is not homogeneously expressed, but rather is found in subpopulations of cells in the brain and testes and during development.


Assuntos
Encéfalo/enzimologia , Reparo do DNA/genética , Desenvolvimento Embrionário e Fetal , Feto/fisiologia , Expressão Gênica , Liases/biossíntese , Espermatozoides/enzimologia , Testículo/enzimologia , Animais , Sequência de Bases , Northern Blotting , Clonagem Molecular , Primers do DNA , DNA Liase (Sítios Apurínicos ou Apirimidínicos) , Desoxirribonuclease IV (Fago T4-Induzido) , Glutationa Transferase/biossíntese , Humanos , Hibridização In Situ , Masculino , Dados de Sequência Molecular , Especificidade de Órgãos , Reação em Cadeia da Polimerase , Sondas RNA , RNA Mensageiro/análise , RNA Mensageiro/biossíntese , Ratos , Ratos Wistar , Proteínas Recombinantes de Fusão/biossíntese , Transcrição Gênica
17.
Mutat Res ; 337(3): 191-9, 1995 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-7491122

RESUMO

A rat cDNA (rAPEN) with 85% DNA identity to the major human apurinic/apyrimidinic (AP) endonuclease gene was used to construct a fusion between it and glutathione-S-transferase (GST). The GST-rAPEN fusion was subsequently overexpressed in Escherichia coli, purified on glutathione-agarose affinity columns, and the purified protein tested for AP endonuclease activity. DNA nicks were found to be specifically introduced into AP DNA in a reaction that was dependent upon the time of incubation and the amount of GST-rAPEN added. The DNA scissions produced by GST-rAPEN were determined to be adjacent and 5' to an AP site. The purified fusion protein was also able to efficiently remove 3'-(4 hydroxy-5-phospho-2-pentenal) residues, and to a lesser extent 3'-phosphoglycolate residues. The GST-rAPEN activity failed to exhibit any 3'-5' exonuclease activity, a characteristic shared by the major AP endonuclease in bovine and human.


Assuntos
Dano ao DNA , Proteínas de Escherichia coli , Liases/metabolismo , Animais , Sequência de Bases , DNA Complementar/genética , DNA Liase (Sítios Apurínicos ou Apirimidínicos) , Desoxirribonuclease IV (Fago T4-Induzido) , Escherichia coli/genética , Exodesoxirribonuclease V , Exodesoxirribonucleases/metabolismo , Liases/genética , Dados de Sequência Molecular , Ratos , Proteínas Recombinantes de Fusão/biossíntese , Especificidade por Substrato
18.
Insect Mol Biol ; 4(1): 1-5, 1995 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-7742972

RESUMO

Although uracil-DNA glycosylases were at one time considered to be ubiquitous in nature, this DNA repair activity is notably absent in Drosophila melanogaster and other pupating insects. On the other hand, a nuclease has been identified in Drosophila that is specific for uracil-containing DNA, but curiously the expression of this activity is restricted to late larval stages of development. Since the nuclease activity is only detected near the time of histolysation, we began questioning the possible role uracil might play in the events associated with the eventual DNA degradation that is involved in the metamorphotic process. The results of these studies have provided us with a molecular model for pupating insects that contains all the necessary elements to program cells for their ultimate death, and in so doing, shows why uracil-DNA glycosylases would be incompatible with our proposed pathway for apoptosis.


Assuntos
Apoptose/fisiologia , Reparo do DNA , Drosophila melanogaster/fisiologia , Uracila/metabolismo , Animais , DNA/metabolismo , Drosophila melanogaster/genética , Pupa/genética , Pirofosfatases
19.
J Biol Chem ; 269(41): 25359-64, 1994 Oct 14.
Artigo em Inglês | MEDLINE | ID: mdl-7929231

RESUMO

A rat cDNA-encoding ribosomal protein S3 was used to clone the S3 homolog in Drosophila melanogaster. The Drosophila gene was in turn used to construct fusions between S3 and glutathione S-transferase that were overexpressed in Escherichia coli, purified on affinity columns, and subsequently used for antibody production and biochemical analysis. Antibody specific for S3 was originally tested to determine the subcellular location of S3 by Western (immunoblot) analysis. As expected, the S3 antigen was found associated with purified preparations of ribosomes, but notably the protein was also observed in the nucleus where it was found to be tightly associated with the nuclear matrix. This result, combined with the fact that S3 contains a nuclear localization signal and that the protein shares some homology to a yeast nuclease gene, suggested that S3 might possibly have a role in DNA metabolism. Tests were initially performed to see if S3 contained DNase activity, where it was subsequently determined that the protein specifically cleaved DNA containing an apurinic/apyrimidinic site via a beta-elimination reaction. The DNase activity was inactivated by antibody to S3, indicating that the apurinic/apyrimidinic lyase activity was associated with the Drosophila S3 protein. Taken together, these results suggest that S3 is among a growing class of multifunctional proteins with roles in transcription/translation and DNA repair.


Assuntos
Dano ao DNA , Reparo do DNA , Drosophila melanogaster/metabolismo , Proteínas Ribossômicas/metabolismo , Animais , Compartimento Celular , Cromatina/química , Mapeamento Cromossômico , Drosophila melanogaster/embriologia , Drosophila melanogaster/genética , Hibridização In Situ , Matriz Nuclear/química , Proteínas Recombinantes de Fusão/metabolismo , Proteínas Ribossômicas/genética , Especificidade por Substrato
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